RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 TSSK3Q96PN8 268 aa26.85■■□□□ 1.89
CBX4-201ENST00000269397 CPPED1Q9BRF8 314 aaPredicted RBP26.85■■□□□ 1.89
CBX4-201ENST00000269397 PLXNA3P51805 1871 aa26.85■■□□□ 1.89
CBX4-201ENST00000269397 FAM20BO75063 409 aa26.84■■□□□ 1.89
CBX4-201ENST00000269397 ALOX5P09917 674 aa26.84■■□□□ 1.89
CBX4-201ENST00000269397 GSSP48637 474 aa26.84■■□□□ 1.89
CBX4-201ENST00000269397 GZMMP51124 257 aa26.84■■□□□ 1.89
CBX4-201ENST00000269397 HUNKP57058 714 aa26.84■■□□□ 1.89
CBX4-201ENST00000269397 IL18R1Q13478 541 aa26.84■■□□□ 1.89
CBX4-201ENST00000269397 CPSF6Q16630 551 aaKnown RBP eCLIP26.84■■□□□ 1.89
CBX4-201ENST00000269397 RFX4Q33E94 735 aa26.84■■□□□ 1.89
CBX4-201ENST00000269397 C16orf59Q7L2K0 433 aa26.84■■□□□ 1.89
CBX4-201ENST00000269397 SLIRPQ9GZT3 109 aaKnown RBP26.84■■□□□ 1.89
CBX4-201ENST00000269397 MAGIXQ9H6Y5 334 aa26.84■■□□□ 1.89
CBX4-201ENST00000269397 SERHLQ9NQF3 203 aa26.84■■□□□ 1.89
CBX4-201ENST00000269397 OLA1Q9NTK5 396 aaKnown RBP26.84■■□□□ 1.89
CBX4-201ENST00000269397 SCN3BQ9NY72 215 aa26.84■■□□□ 1.89
CBX4-201ENST00000269397 POU2F3Q9UKI9 436 aa26.84■■□□□ 1.89
CBX4-201ENST00000269397 RECQL5O94762 991 aaPredicted RBP26.84■■□□□ 1.89
CBX4-201ENST00000269397 ALPIP09923 528 aa26.84■■□□□ 1.89
CBX4-201ENST00000269397 PABPC1P11940 636 aaKnown RBP26.84■■□□□ 1.89
CBX4-201ENST00000269397 SYT16Q17RD7 645 aa26.84■■□□□ 1.89
CBX4-201ENST00000269397 SETD9Q8NE22 299 aa26.84■■□□□ 1.89
CBX4-201ENST00000269397 ULK4Q96C45 1275 aa26.84■■□□□ 1.89
CBX4-201ENST00000269397 DACH2Q96NX9 599 aa26.84■■□□□ 1.89
CBX4-201ENST00000269397 ACOT13Q9NPJ3 140 aa26.84■■□□□ 1.89
CBX4-201ENST00000269397 PRSS21Q9Y6M0 314 aa26.84■■□□□ 1.89
CBX4-201ENST00000269397 FAM220BPB1ANY3 271 aa26.83■■□□□ 1.89
CBX4-201ENST00000269397 SYT6Q5T7P8 510 aaPredicted RBP26.83■■□□□ 1.89
CBX4-201ENST00000269397 ATG9BQ674R7 924 aa26.83■■□□□ 1.89
CBX4-201ENST00000269397 AHSA2Q719I0 299 aa26.83■■□□□ 1.89
CBX4-201ENST00000269397 CALHM3Q86XJ0 350 aa26.83■■□□□ 1.89
CBX4-201ENST00000269397 PLD3Q8IV08 490 aa26.83■■□□□ 1.89
CBX4-201ENST00000269397 PCDHB9Q9Y5E1 797 aa26.83■■□□□ 1.89
CBX4-201ENST00000269397 MAGP20916 626 aa26.83■■□□□ 1.89
CBX4-201ENST00000269397 SEPHS1P49903 392 aa26.83■■□□□ 1.89
CBX4-201ENST00000269397 USP39Q53GS9 565 aaKnown RBP26.83■■□□□ 1.89
CBX4-201ENST00000269397 ZC3H12BQ5HYM0 836 aaKnown RBP26.83■■□□□ 1.89
CBX4-201ENST00000269397 VTCN1Q7Z7D3 282 aa26.83■■□□□ 1.89
CBX4-201ENST00000269397 DENND1CQ8IV53 801 aa26.83■■□□□ 1.89
CBX4-201ENST00000269397 GLB1L3Q8NCI6 653 aaPredicted RBP26.83■■□□□ 1.89
CBX4-201ENST00000269397 ADGRE3Q9BY15 652 aa26.83■■□□□ 1.89
CBX4-201ENST00000269397 DSN1Q9H410 356 aa26.83■■□□□ 1.89
CBX4-201ENST00000269397 GPRC5BQ9NZH0 403 aa26.83■■□□□ 1.89
CBX4-201ENST00000269397 KDELR3O43731 214 aa26.83■■□□□ 1.88
CBX4-201ENST00000269397 F11P03951 625 aa26.83■■□□□ 1.88
CBX4-201ENST00000269397 CD36P16671 472 aa26.83■■□□□ 1.88
CBX4-201ENST00000269397 CD9P21926 228 aa26.83■■□□□ 1.88
CBX4-201ENST00000269397 TACR1P25103 407 aa26.83■■□□□ 1.88
CBX4-201ENST00000269397 SELENBP1Q13228 472 aa26.83■■□□□ 1.88
CBX4-201ENST00000269397 MAD2L1Q13257 205 aaPredicted RBP26.83■■□□□ 1.88
CBX4-201ENST00000269397 DOK6Q6PKX4 331 aa26.83■■□□□ 1.88
CBX4-201ENST00000269397 TTC29Q8NA56 475 aaPredicted RBP26.83■■□□□ 1.88
CBX4-201ENST00000269397 MIR1-1HGQ9H1L0 117 aa26.83■■□□□ 1.88
CBX4-201ENST00000269397 TNKS2Q9H2K2 1166 aa26.83■■□□□ 1.88
CBX4-201ENST00000269397 EPS8L2Q9H6S3 715 aa26.83■■□□□ 1.88
CBX4-201ENST00000269397 PARVBQ9HBI1 364 aa26.83■■□□□ 1.88
CBX4-201ENST00000269397 PDP1Q9P0J1 537 aaPredicted RBP26.83■■□□□ 1.88
CBX4-201ENST00000269397 VPS4AQ9UN37 437 aa26.83■■□□□ 1.88
CBX4-201ENST00000269397 H3BNC9 293 aa26.82■■□□□ 1.88
CBX4-201ENST00000269397 SLC28A1O00337 649 aa26.82■■□□□ 1.88
CBX4-201ENST00000269397 MANBAO00462 879 aa26.82■■□□□ 1.88
CBX4-201ENST00000269397 SCAMP3O14828 347 aaKnown RBP26.82■■□□□ 1.88
CBX4-201ENST00000269397 RGS10O43665 173 aa26.82■■□□□ 1.88
CBX4-201ENST00000269397 CD40LGP29965 261 aa26.82■■□□□ 1.88
CBX4-201ENST00000269397 NEK2P51955 445 aa26.82■■□□□ 1.88
CBX4-201ENST00000269397 FCGRTP55899 365 aa26.82■■□□□ 1.88
CBX4-201ENST00000269397 C9orf131Q5VYM1 1079 aa26.82■■□□□ 1.88
CBX4-201ENST00000269397 ZNF598Q86UK7 904 aaKnown RBP26.82■■□□□ 1.88
CBX4-201ENST00000269397 OR52E4Q8NGH9 312 aa26.82■■□□□ 1.88
CBX4-201ENST00000269397 GPR63Q9BZJ6 419 aa26.82■■□□□ 1.88
CBX4-201ENST00000269397 ZBTB20Q9HC78 741 aaPredicted RBP26.82■■□□□ 1.88
CBX4-201ENST00000269397 SLC25A14O95258 325 aaPredicted RBP26.82■■□□□ 1.88
CBX4-201ENST00000269397 JUNDP17535 347 aa26.82■■□□□ 1.88
CBX4-201ENST00000269397 S100A3P33764 101 aa26.82■■□□□ 1.88
CBX4-201ENST00000269397 KRT20P35900 424 aa26.82■■□□□ 1.88
CBX4-201ENST00000269397 CCDC92Q53HC0 331 aaPredicted RBP26.82■■□□□ 1.88
CBX4-201ENST00000269397 FKBP9P1Q75LS8 142 aa26.82■■□□□ 1.88
CBX4-201ENST00000269397 PLPP6Q8IY26 295 aa26.82■■□□□ 1.88
CBX4-201ENST00000269397 SCAIQ8N9R8 606 aa26.82■■□□□ 1.88
CBX4-201ENST00000269397 PHF10Q8WUB8 498 aaKnown RBP26.82■■□□□ 1.88
CBX4-201ENST00000269397 ZHX1-C8orf76Q96EF9 292 aa26.82■■□□□ 1.88
CBX4-201ENST00000269397 FAM126AQ9BYI3 521 aaPredicted RBP26.82■■□□□ 1.88
CBX4-201ENST00000269397 CD244Q9BZW8 370 aa26.82■■□□□ 1.88
CBX4-201ENST00000269397 CLPBQ9H078 707 aa26.82■■□□□ 1.88
CBX4-201ENST00000269397 IL37Q9NZH6 218 aa26.82■■□□□ 1.88
CBX4-201ENST00000269397 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP26.82■■□□□ 1.882e-6■■■□□ 16.5
CBX4-201ENST00000269397 ACSL4O60488 711 aa26.81■■□□□ 1.88
CBX4-201ENST00000269397 OR2T5Q6IEZ7 315 aa26.81■■□□□ 1.88
CBX4-201ENST00000269397 CAPN13Q6MZZ7 669 aaPredicted RBP26.81■■□□□ 1.88
CBX4-201ENST00000269397 SERPINA9Q86WD7 417 aa26.81■■□□□ 1.88
CBX4-201ENST00000269397 RASAL3Q86YV0 1011 aa26.81■■□□□ 1.88
CBX4-201ENST00000269397 MINDY2Q8NBR6 621 aa26.81■■□□□ 1.88
CBX4-201ENST00000269397 OR2T29Q8NH02 315 aa26.81■■□□□ 1.88
CBX4-201ENST00000269397 PDLIM5Q96HC4 596 aaKnown RBP26.81■■□□□ 1.88
CBX4-201ENST00000269397 EGLN2Q96KS0 407 aa26.81■■□□□ 1.88
CBX4-201ENST00000269397 CHD5Q8TDI0 1954 aa26.81■■□□□ 1.88
CBX4-201ENST00000269397 GOLGA8CPA6NN73 597 aa26.81■■□□□ 1.88
CBX4-201ENST00000269397 RHOCP08134 193 aa26.81■■□□□ 1.88
CBX4-201ENST00000269397 PSMA3P25788 255 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms