RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 MPZL2O60487 215 aa16.36■□□□□ 0.21
PHRF1-201ENST00000264555 SRPRAP08240 638 aaKnown RBP16.36■□□□□ 0.21
PHRF1-201ENST00000264555 TEAD2Q15562 447 aa16.36■□□□□ 0.21
PHRF1-201ENST00000264555 SLCO6A1Q86UG4 719 aa16.36■□□□□ 0.21
PHRF1-201ENST00000264555 PARP8Q8N3A8 854 aa16.36■□□□□ 0.21
PHRF1-201ENST00000264555 BTBD3Q9Y2F9 522 aa16.36■□□□□ 0.21
PHRF1-201ENST00000264555 TESMINQ9Y4I5 508 aa16.36■□□□□ 0.21
PHRF1-201ENST00000264555 DDX60LQ5H9U9 1706 aaKnown RBP16.36■□□□□ 0.21
PHRF1-201ENST00000264555 PITPNM1O00562 1244 aa16.36■□□□□ 0.21
PHRF1-201ENST00000264555 TCF3P15923 654 aa16.36■□□□□ 0.21
PHRF1-201ENST00000264555 ETV4P43268 484 aa16.36■□□□□ 0.21
PHRF1-201ENST00000264555 STXBP1P61764 594 aaKnown RBP16.36■□□□□ 0.21
PHRF1-201ENST00000264555 BIKQ13323 160 aa16.36■□□□□ 0.21
PHRF1-201ENST00000264555 PTCHD3Q3KNS1 767 aa16.36■□□□□ 0.21
PHRF1-201ENST00000264555 GPRC6AQ5T6X5 926 aa16.36■□□□□ 0.21
PHRF1-201ENST00000264555 ANO7Q6IWH7 933 aa16.36■□□□□ 0.21
PHRF1-201ENST00000264555 THOC6Q86W42 341 aaKnown RBP16.36■□□□□ 0.21
PHRF1-201ENST00000264555 SCML4Q8N228 414 aa16.36■□□□□ 0.21
PHRF1-201ENST00000264555 C12orf66Q96MD2 445 aa16.36■□□□□ 0.21
PHRF1-201ENST00000264555 PTTG2Q9NZH5 202 aa16.36■□□□□ 0.21
PHRF1-201ENST00000264555 CCNB2O95067 398 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 LATS1O95835 1130 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 EIF2B2P49770 351 aaKnown RBP16.35■□□□□ 0.21
PHRF1-201ENST00000264555 PPP1R3AQ16821 1122 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 PKDCCQ504Y2 493 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 KCTD8Q6ZWB6 473 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 SLC30A8Q8IWU4 369 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 SLC34A3Q8N130 599 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 HDDC3Q8N4P3 179 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 PDPRQ8NCN5 879 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 ZBED6CLQ96FA7 236 aaPredicted RBP16.35■□□□□ 0.21
PHRF1-201ENST00000264555 OLFM1Q99784 485 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 LMAN2LQ9H0V9 348 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 MTMR10Q9NXD2 777 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 MARCH4Q9P2E8 410 aaPredicted RBP16.35■□□□□ 0.21
PHRF1-201ENST00000264555 ARAP2Q8WZ64 1704 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 EDDM13A0A1B0GTR0 161 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 PDPK1O15530 556 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 RB1P06400 928 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 MBOAT1Q6ZNC8 495 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 ERMP1Q7Z2K6 904 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 GJD3Q8N144 294 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 MTRRQ9UBK8 725 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 B4GALT6Q9UBX8 382 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 HEBP2Q9Y5Z4 205 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 WNT6Q9Y6F9 365 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 NOBOXO60393 691 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 PGRP06401 933 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 SLC35G6P0C7Q6 338 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 AGTR2P50052 363 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 CSNK2BP67870 215 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 PRR5P85299 388 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 ILF3Q12906 894 aaKnown RBP eCLIP16.35■□□□□ 0.212e-7■■□□□ 14.5
PHRF1-201ENST00000264555 HKDC1Q2TB90 917 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 UNC50Q53HI1 259 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 ZZZ3Q8IYH5 903 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 PSMA8Q8TAA3 256 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 MIR1-1HGQ9H1L0 117 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 PTGFRNQ9P2B2 879 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 RNF11Q9Y3C5 154 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 MARF1Q9Y4F3 1742 aaKnown RBP16.35■□□□□ 0.21
PHRF1-201ENST00000264555 A0A1W2PRB8 838 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 AP2A2O94973 939 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 PRG2P13727 222 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 FDXRP22570 491 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 LARS2Q15031 903 aaKnown RBP16.35■□□□□ 0.21
PHRF1-201ENST00000264555 TAZQ16635 292 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 PERM1Q5SV97 790 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 SCD5Q86SK9 330 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 ZUFSPQ96AP4 578 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 CLIP3Q96DZ5 547 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 TLR9Q9NR96 1032 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 LRRC72A6NJI9 287 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 RASGRP1O95267 797 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 RPL4P36578 427 aaKnown RBP16.35■□□□□ 0.21
PHRF1-201ENST00000264555 CDKN2DP55273 166 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 GPM6BQ13491 265 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 ZNF730Q6ZMV8 503 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 ASRGL1Q7L266 308 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 ABCB10Q9NRK6 738 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 OSER1Q9NX31 292 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 CALML5Q9NZT1 146 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 GIMAP2Q9UG22 337 aa16.35■□□□□ 0.21
PHRF1-201ENST00000264555 A0A1B0GW55 424 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 MFN2O95140 757 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 ITGB1P05556 798 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 DUX4L2P0CJ85 424 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 DUX4L3P0CJ86 424 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 DUX4L4P0CJ87 422 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 DUX4L5P0CJ88 424 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 DUX4L6P0CJ89 424 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 DUX4L7P0CJ90 424 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 TPP2P29144 1249 aaPredicted RBP16.34■□□□□ 0.21
PHRF1-201ENST00000264555 CLCN4P51793 760 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 SEC13P55735 322 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 CWF19L1Q69YN2 538 aaKnown RBP16.34■□□□□ 0.21
PHRF1-201ENST00000264555 OR4F3Q6IEY1 312 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 NEK10Q6ZWH5 1172 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 DEPDC7Q96QD5 511 aa16.34■□□□□ 0.21
PHRF1-201ENST00000264555 MAT2BQ9NZL9 334 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms