RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 RPP38P78345 283 aaKnown RBP12.11□□□□□ -0.47
CHMP2B-201ENST00000263780 ZNF235Q14590 738 aa12.11□□□□□ -0.47
CHMP2B-201ENST00000263780 IHHQ14623 411 aa12.11□□□□□ -0.47
CHMP2B-201ENST00000263780 PTPRCAPQ14761 206 aa12.11□□□□□ -0.47
CHMP2B-201ENST00000263780 ABRAXAS2Q15018 415 aa12.11□□□□□ -0.47
CHMP2B-201ENST00000263780 SMN1Q16637 294 aaKnown RBP12.11□□□□□ -0.47
CHMP2B-201ENST00000263780 PARP15Q460N3 678 aa12.11□□□□□ -0.47
CHMP2B-201ENST00000263780 CARD16Q5EG05 197 aa12.11□□□□□ -0.47
CHMP2B-201ENST00000263780 SPANXN4Q5MJ08 99 aa12.11□□□□□ -0.47
CHMP2B-201ENST00000263780 LRIF1Q5T3J3 769 aa12.11□□□□□ -0.47
CHMP2B-201ENST00000263780 LAIR1Q6GTX8 287 aa12.11□□□□□ -0.47
CHMP2B-201ENST00000263780 TWF2Q6IBS0 349 aaKnown RBP12.11□□□□□ -0.47
CHMP2B-201ENST00000263780 EEF1AKMT1Q8WVE0 214 aa12.11□□□□□ -0.47
CHMP2B-201ENST00000263780 ESAMQ96AP7 390 aa12.11□□□□□ -0.47
CHMP2B-201ENST00000263780 PYCR2Q96C36 320 aa12.11□□□□□ -0.47
CHMP2B-201ENST00000263780 CRELD1Q96HD1 420 aa12.11□□□□□ -0.47
CHMP2B-201ENST00000263780 PRDM5Q9NQX1 630 aaPredicted RBP12.11□□□□□ -0.47
CHMP2B-201ENST00000263780 VNN3Q9NY84 501 aa12.11□□□□□ -0.47
CHMP2B-201ENST00000263780 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.11□□□□□ -0.47
CHMP2B-201ENST00000263780 TRAPPC4Q9Y296 219 aa12.11□□□□□ -0.47
CHMP2B-201ENST00000263780 C2orf81A6NN90 581 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 DSCR3O14972 297 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 ZNF682O95780 498 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 RPL9P32969 192 aaKnown RBP12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 TGFBR1P36897 503 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 GZMMP51124 257 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 CLCN4P51793 760 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 NPRL3Q12980 569 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 TTLL9Q3SXZ7 439 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 INO80DQ53TQ3 878 aaPredicted RBP12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 CEP68Q76N32 757 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 ADAMTSL2Q86TH1 951 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 PGBD5Q8N414 524 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 DCBLD1Q8N8Z6 715 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 KCNJ9Q92806 393 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 REEP1Q9H902 201 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 RASSF1Q9NS23 344 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 PSORS1C1Q9UIG5 152 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 CFL2Q9Y281 166 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 TLR6Q9Y2C9 796 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 MAN2B2Q9Y2E5 1009 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 KLK4Q9Y5K2 254 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 MBLAC1A4D2B0 266 aaPredicted RBP12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 E5RI56 91 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 M0R082 166 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 OR7A17O14581 309 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 CAPN5O15484 640 aaPredicted RBP12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 DPM1O60762 260 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 WBP4O75554 376 aaKnown RBP12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 ARHGEF15O94989 841 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 THP07101 528 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 MAGP20916 626 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 ZNF140P52738 457 aaPredicted RBP12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 UGT2B15P54855 530 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 MFSD10Q14728 455 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 TAF1AQ15573 450 aaPredicted RBP12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 RAB43Q86YS6 212 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 GALNT12Q8IXK2 581 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 PHACTR4Q8IZ21 702 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 PGBD3Q8N328 593 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 LIX1Q8N485 282 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 CELF2-AS1Q8N7Q2 184 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 SIDT2Q8NBJ9 832 aaKnown RBP12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 GALNT6Q8NCL4 622 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 OR6J1Q8NGC5 347 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 MED30Q96HR3 178 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 IPPKQ9H8X2 491 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 TRMT13Q9NUP7 481 aaKnown RBP12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 FBXL12Q9NXK8 326 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 SAMHD1Q9Y3Z3 626 aaKnown RBP12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 CCL27Q9Y4X3 112 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 PCDHGA3Q9Y5H0 932 aa12.1□□□□□ -0.47
CHMP2B-201ENST00000263780 NYNRINQ9P2P1 1898 aaKnown RBP12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 RAMP2O60895 175 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 UGT2B17O75795 530 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 CNPP09543 421 aaKnown RBP12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 SMIM10L2AP0DMW4 78 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 SMIM10L2BP0DMW5 78 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 PSMA3P25788 255 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 S100A3P33764 101 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 CRYBB1P53674 252 aaPredicted RBP12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 YBEYP58557 167 aaPredicted RBP12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 TEKQ02763 1124 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 GALNT3Q14435 633 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 PTGR1Q14914 329 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 PIK3R6Q5UE93 754 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 DNAJC14Q6Y2X3 702 aaPredicted RBP12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 CCDC190Q86UF4 302 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 SCAMP5Q8TAC9 235 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 HRASLS5Q96KN8 279 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 COL21A1Q96P44 957 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 RAD9AQ99638 391 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 LRTM1Q9HBL6 345 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 SPASTQ9UBP0 616 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 AASSQ9UDR5 926 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 SATB2Q9UPW6 733 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 PCDHGB2Q9Y5G2 931 aa12.09□□□□□ -0.47
CHMP2B-201ENST00000263780 CDK1P06493 297 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms