RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 FAM83DQ9H4H8 585 aa18.23■□□□□ 0.51
PDLIM4-201ENST00000253754 C1orf109Q9NX04 203 aa18.23■□□□□ 0.51
PDLIM4-201ENST00000253754 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.23■□□□□ 0.51
PDLIM4-201ENST00000253754 SLC22A14Q9Y267 594 aa18.23■□□□□ 0.51
PDLIM4-201ENST00000253754 CXorf51AA0A1B0GTR3 108 aa18.22■□□□□ 0.51
PDLIM4-201ENST00000253754 FADS2P1A8MWK0 482 aa18.22■□□□□ 0.51
PDLIM4-201ENST00000253754 VILLO15195 856 aa18.22■□□□□ 0.51
PDLIM4-201ENST00000253754 CHCHD4Q8N4Q1 142 aa18.22■□□□□ 0.51
PDLIM4-201ENST00000253754 FAM86B1Q8N7N1 296 aa18.22■□□□□ 0.51
PDLIM4-201ENST00000253754 MFSD2AQ8NA29 543 aa18.22■□□□□ 0.51
PDLIM4-201ENST00000253754 PAPD5Q8NDF8 572 aaKnown RBP18.22■□□□□ 0.51
PDLIM4-201ENST00000253754 TSPAN14Q8NG11 270 aa18.22■□□□□ 0.51
PDLIM4-201ENST00000253754 OR10A6Q8NH74 314 aa18.22■□□□□ 0.51
PDLIM4-201ENST00000253754 ELMO1Q92556 727 aa18.22■□□□□ 0.51
PDLIM4-201ENST00000253754 MRPL38Q96DV4 380 aaKnown RBP18.22■□□□□ 0.51
PDLIM4-201ENST00000253754 RSPRY1Q96DX4 576 aa18.22■□□□□ 0.51
PDLIM4-201ENST00000253754 VPS50Q96JG6 964 aa18.22■□□□□ 0.51
PDLIM4-201ENST00000253754 HEPHQ9BQS7 1158 aa18.22■□□□□ 0.51
PDLIM4-201ENST00000253754 C9orf16Q9BUW7 83 aa18.22■□□□□ 0.51
PDLIM4-201ENST00000253754 ADI1Q9BV57 179 aa18.22■□□□□ 0.51
PDLIM4-201ENST00000253754 SLC29A3Q9BZD2 475 aa18.22■□□□□ 0.51
PDLIM4-201ENST00000253754 TRIM4Q9C037 500 aa18.22■□□□□ 0.51
PDLIM4-201ENST00000253754 CLMPQ9H6B4 373 aa18.22■□□□□ 0.51
PDLIM4-201ENST00000253754 SOX17Q9H6I2 414 aaPredicted RBP18.22■□□□□ 0.51
PDLIM4-201ENST00000253754 CARS2Q9HA77 564 aaKnown RBP18.22■□□□□ 0.51
PDLIM4-201ENST00000253754 KLHL42Q9P2K6 505 aa18.22■□□□□ 0.51
PDLIM4-201ENST00000253754 KCNE1BA0A087WTH5 132 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 WASH3PC4AMC7 463 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 HIST1H2AGP0C0S8 130 aaPredicted RBP18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 POLR2EP19388 210 aaKnown RBP18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 HIST1H2ADP20671 130 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 TACR1P25103 407 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 NFKBIAP25963 317 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 POLR2LP62875 67 aaKnown RBP18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 PHC1P78364 1004 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 MAD2L1Q13257 205 aaPredicted RBP18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 METTL2BQ6P1Q9 378 aaKnown RBP18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 SPRED1Q7Z699 444 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 NPAS3Q8IXF0 933 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 PACRGLQ8N7B6 248 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 FIG4Q92562 907 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 FGF13Q92913 245 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 FBXL20Q96IG2 436 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 HIST1H2AHQ96KK5 128 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 HIST1H2AJQ99878 128 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 H2AFJQ9BTM1 129 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 TBCDQ9BTW9 1192 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 THUMPD3Q9BV44 507 aaKnown RBP18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 RIOK2Q9BVS4 552 aaKnown RBP18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 ELOVL6Q9H5J4 265 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 MAGEL2Q9UJ55 1249 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 IFRD1O00458 451 aaPredicted RBP18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 LINC01565O15544 149 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 RASAL1O95294 804 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 H6PDO95479 791 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 KRT6AP02538 564 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 KRT6BP04259 564 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 C8GP07360 202 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 PCNAP12004 261 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 FCGR1AP12314 374 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 TCF3P15923 654 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 TIMP2P16035 220 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 GGT1P19440 569 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 FSHRP23945 695 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 VIPR1P32241 457 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 SLC6A12P48065 614 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 KRT6CP48668 564 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 CDH15P55291 814 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 FAM78AQ5JUQ0 283 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 ZDHHC20Q5W0Z9 365 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 BRAT1Q6PJG6 821 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 TBPL2Q6SJ96 375 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 RNF165Q6ZSG1 346 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 LRRC70Q7Z2Q7 622 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 TBC1D21Q8IYX1 336 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 PHACTR4Q8IZ21 702 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 LILRA3Q8N6C8 439 aaPredicted RBP18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 OR8J3Q8NGG0 315 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 NCSTNQ92542 709 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 OTUB2Q96DC9 234 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 PNPLA3Q9NST1 481 aa18.21■□□□□ 0.51
PDLIM4-201ENST00000253754 H3BNH8 94 aa18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 SLC9A3R1O14745 358 aaPredicted RBP18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 UMPSP11172 480 aa18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 MERTKQ12866 999 aa18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 TMTC4Q5T4D3 741 aa18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 GET4Q7L5D6 327 aaPredicted RBP18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 ANKRD46Q86W74 232 aa18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 CYGBQ8WWM9 190 aa18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 RMND5BQ96G75 393 aaPredicted RBP18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 AURKBQ96GD4 344 aaPredicted RBP18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 TSSK3Q96PN8 268 aa18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 OR52E6Q96RD3 313 aa18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 CDCA3Q99618 268 aaPredicted RBP18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 EPB41L1Q9H4G0 881 aa18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 ITM2BQ9Y287 266 aa18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 NUP210Q8TEM1 1887 aaPredicted RBP18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 KANSL1LA0AUZ9 987 aa18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 CCDC160A6NGH7 325 aa18.2■□□□□ 0.5
PDLIM4-201ENST00000253754 LRATO95237 230 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms