RNA–Protein interactions for RNA: ENST00000250003.3

MYOD1-201, Transcript of myogenic differentiation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MYOD1, Length 1,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYOD1-201ENST00000250003 RPS17P08708 135 aaKnown RBP16.05■□□□□ 0.16
MYOD1-201ENST00000250003 ENGP17813 658 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 TSPAN8P19075 237 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 GRK2P25098 689 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 IMPA1P29218 277 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 GDF5P43026 501 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 HNMTP50135 292 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 CDH13P55290 713 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 GRIK2Q13002 908 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 GRB7Q14451 532 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 KRT33BQ14525 404 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 TTC23LQ6PF05 361 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 RABEPKQ7Z6M1 372 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 TBC1D21Q8IYX1 336 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 LMNTD1Q8N9Z9 388 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 PPFIBP2Q8ND30 876 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 OR9A1PQ8NGU1 263 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 UBTD2Q8WUN7 234 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 FBXL8Q96CD0 374 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 IL17FQ96PD4 163 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 ZNF317Q96PQ6 595 aaPredicted RBP16.05■□□□□ 0.16
MYOD1-201ENST00000250003 NRTNQ99748 197 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 ATG10Q9H0Y0 220 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 GSTO2Q9H4Y5 243 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 ERVMER34-1Q9H9K5 563 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 TMEM9BQ9NQ34 198 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 UCKL1Q9NWZ5 548 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 STOX2Q9P2F5 926 aaPredicted RBP16.05■□□□□ 0.16
MYOD1-201ENST00000250003 ZNF624Q9P2J8 865 aaPredicted RBP16.05■□□□□ 0.16
MYOD1-201ENST00000250003 PCTPQ9UKL6 214 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 B4DGG1 531 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 E2F3O00716 465 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 SNNO75324 88 aaPredicted RBP16.05■□□□□ 0.16
MYOD1-201ENST00000250003 SLC1A6P48664 564 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 ABCE1P61221 599 aaKnown RBP16.05■□□□□ 0.16
MYOD1-201ENST00000250003 RCN2Q14257 317 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 CDKL4Q5MAI5 379 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 FRMD7Q6ZUT3 714 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 LRRC34Q8IZ02 419 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 TCAIMQ8N3R3 496 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 FAM46DQ8NEK8 389 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 RAD51AP1Q96B01 352 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 PYCR2Q96C36 320 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 CHMP6Q96FZ7 201 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 ELF4Q99607 663 aaPredicted RBP16.05■□□□□ 0.16
MYOD1-201ENST00000250003 SHCBP1LQ9BZQ2 653 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 RABEP2Q9H5N1 569 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 CAPN10Q9HC96 672 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 FGFR1OP2Q9NVK5 253 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 DOLKQ9UPQ8 538 aa16.05■□□□□ 0.16
MYOD1-201ENST00000250003 PCDH15Q96QU1 1955 aa16.04■□□□□ 0.16
MYOD1-201ENST00000250003 TMEM114B3SHH9 223 aa16.04■□□□□ 0.16
MYOD1-201ENST00000250003 CCNT2O60583 730 aaKnown RBP16.04■□□□□ 0.16
MYOD1-201ENST00000250003 OCRLQ01968 901 aa16.04■□□□□ 0.16
MYOD1-201ENST00000250003 PCBP2Q15366 365 aaKnown RBP eCLIP16.04■□□□□ 0.16
MYOD1-201ENST00000250003 ARL13AQ5H913 290 aaPredicted RBP16.04■□□□□ 0.16
MYOD1-201ENST00000250003 ANKS6Q68DC2 871 aa16.04■□□□□ 0.16
MYOD1-201ENST00000250003 IYDQ6PHW0 289 aa16.04■□□□□ 0.16
MYOD1-201ENST00000250003 AGTRAPQ6RW13 159 aa16.04■□□□□ 0.16
MYOD1-201ENST00000250003 GKN2Q86XP6 184 aa16.04■□□□□ 0.16
MYOD1-201ENST00000250003 PPP4R1Q8TF05 950 aa16.04■□□□□ 0.16
MYOD1-201ENST00000250003 ZDHHC1Q8WTX9 485 aa16.04■□□□□ 0.16
MYOD1-201ENST00000250003 ZNF480Q8WV37 535 aa16.04■□□□□ 0.16
MYOD1-201ENST00000250003 CXorf40BQ96DE9 158 aa16.04■□□□□ 0.16
MYOD1-201ENST00000250003 C1QTNF3Q9BXJ4 246 aa16.04■□□□□ 0.16
MYOD1-201ENST00000250003 PITPNM3Q9BZ71 974 aa16.04■□□□□ 0.16
MYOD1-201ENST00000250003 CD244Q9BZW8 370 aa16.04■□□□□ 0.16
MYOD1-201ENST00000250003 DRC3Q9H069 523 aa16.04■□□□□ 0.16
MYOD1-201ENST00000250003 FAM107BQ9H098 131 aa16.04■□□□□ 0.16
MYOD1-201ENST00000250003 THAP1Q9NVV9 213 aa16.04■□□□□ 0.16
MYOD1-201ENST00000250003 TNPO3Q9Y5L0 923 aaKnown RBP16.04■□□□□ 0.16
MYOD1-201ENST00000250003 HEBP2Q9Y5Z4 205 aa16.04■□□□□ 0.16
MYOD1-201ENST00000250003 YY2O15391 372 aa16.03■□□□□ 0.16
MYOD1-201ENST00000250003 NPHS1O60500 1241 aa16.03■□□□□ 0.16
MYOD1-201ENST00000250003 HSPA4LO95757 839 aa16.03■□□□□ 0.16
MYOD1-201ENST00000250003 SLC19A1P41440 591 aa16.03■□□□□ 0.16
MYOD1-201ENST00000250003 SHBQ15464 509 aa16.03■□□□□ 0.16
MYOD1-201ENST00000250003 DEFB133Q30KQ1 61 aa16.03■□□□□ 0.16
MYOD1-201ENST00000250003 PTCHD3Q3KNS1 767 aa16.03■□□□□ 0.16
MYOD1-201ENST00000250003 SYTL1Q8IYJ3 562 aa16.03■□□□□ 0.16
MYOD1-201ENST00000250003 NAGSQ8N159 534 aa16.03■□□□□ 0.16
MYOD1-201ENST00000250003 SLC37A2Q8TED4 501 aa16.03■□□□□ 0.16
MYOD1-201ENST00000250003 ZNF483Q8TF39 744 aaPredicted RBP16.03■□□□□ 0.16
MYOD1-201ENST00000250003 ATL1Q8WXF7 558 aa16.03■□□□□ 0.16
MYOD1-201ENST00000250003 MED8Q96G25 268 aa16.03■□□□□ 0.16
MYOD1-201ENST00000250003 SORT1Q99523 831 aa16.03■□□□□ 0.16
MYOD1-201ENST00000250003 MVB12BQ9H7P6 319 aa16.03■□□□□ 0.16
MYOD1-201ENST00000250003 SEMA4BQ9NPR2 832 aaPredicted RBP16.03■□□□□ 0.16
MYOD1-201ENST00000250003 OPTCQ9UBM4 332 aa16.03■□□□□ 0.16
MYOD1-201ENST00000250003 MED19A0JLT2 244 aaPredicted RBP16.03■□□□□ 0.16
MYOD1-201ENST00000250003 GMNCA6NCL1 334 aa16.03■□□□□ 0.16
MYOD1-201ENST00000250003 STK16O75716 305 aa16.03■□□□□ 0.16
MYOD1-201ENST00000250003 GGT5P36269 586 aa16.03■□□□□ 0.16
MYOD1-201ENST00000250003 SLC6A12P48065 614 aa16.03■□□□□ 0.16
MYOD1-201ENST00000250003 ARRB1P49407 418 aaPredicted RBP16.03■□□□□ 0.16
MYOD1-201ENST00000250003 CLCQ05315 142 aa16.03■□□□□ 0.16
MYOD1-201ENST00000250003 BNIP3Q12983 259 aa16.03■□□□□ 0.16
MYOD1-201ENST00000250003 NAE1Q13564 534 aa16.03■□□□□ 0.16
MYOD1-201ENST00000250003 FASTKQ14296 549 aaKnown RBP16.03■□□□□ 0.16
MYOD1-201ENST00000250003 TRIM48Q8IWZ4 208 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms