RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 ANGPTL3Q9Y5C1 460 aa12.87□□□□□ -0.35
SLIRP-201ENST00000238688 A0A1B0GTW7 788 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 DYTNA2CJ06 578 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 UBFD1O14562 309 aaKnown RBP12.86□□□□□ -0.35
SLIRP-201ENST00000238688 RNASEH2AO75792 299 aaKnown RBP12.86□□□□□ -0.35
SLIRP-201ENST00000238688 SIX3O95343 332 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-201ENST00000238688 METAP1P53582 386 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 PNLIPRP1P54315 467 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 STX1BP61266 288 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 CDK3Q00526 305 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 DMPKQ09013 629 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 SF3A3Q12874 501 aaKnown RBP eCLIP12.86□□□□□ -0.35
SLIRP-201ENST00000238688 PDCD2Q16342 344 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-201ENST00000238688 WDR45BQ5MNZ6 344 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 TMEM220Q6QAJ8 160 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-201ENST00000238688 HORMAD1Q86X24 394 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 GALNT13Q8IUC8 556 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 FAM9CQ8IZT9 166 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 BEND7Q8N7W2 519 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-201ENST00000238688 FAM174AQ8TBP5 190 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 MAPK15Q8TD08 544 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 TRPC4APQ8TEL6 797 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 TWIST2Q8WVJ9 160 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 SLC7A6OSQ96CW6 309 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-201ENST00000238688 METTL2AQ96IZ6 378 aaKnown RBP12.86□□□□□ -0.35
SLIRP-201ENST00000238688 TMEM121BQ9BXQ6 578 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-201ENST00000238688 WDR26Q9H7D7 661 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 SGK2Q9HBY8 427 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 ZBTB26Q9HCK0 441 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 SERGEFQ9UGK8 458 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 SUSD2Q9UGT4 822 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 EIF2B4Q9UI10 523 aaKnown RBP12.86□□□□□ -0.35
SLIRP-201ENST00000238688 ACSL5Q9ULC5 683 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 PDE10AQ9Y233 779 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 DNAJC15Q9Y5T4 150 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 ST14Q9Y5Y6 855 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 SPEGQ15772 3267 aa12.86□□□□□ -0.35
SLIRP-201ENST00000238688 KNTC1P50748 2209 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 GOLGA4Q13439 2230 aaKnown RBP12.85□□□□□ -0.35
SLIRP-201ENST00000238688 SPAARA0A1B0GVQ0 90 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 A0A1W2PP55 124 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 SERTM1A2A2V5 107 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 LRRC72A6NJI9 287 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 ZNF839A8K0R7 811 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 MEI4A8MW99 385 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 NPIPB8E9PQR5 432 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 H3BM21 787 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 UBDO15205 165 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 KMOO15229 486 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 GYG2O15488 501 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 CBX6O95503 412 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 ACADMP11310 421 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 MYCLP1P12525 358 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-201ENST00000238688 IDO1P14902 403 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 ITGB6P18564 788 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 NCF2P19878 526 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-201ENST00000238688 SPINK2P20155 84 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 KELP23276 732 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 CCND1P24385 295 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 EPHA3P29320 983 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 SLC6A12P48065 614 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 CCNG1P51959 295 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 ADPRHP54922 357 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 CTBSQ01459 385 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 KLF10Q13118 480 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 MAD2L1Q13257 205 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-201ENST00000238688 NAA25Q14CX7 972 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 RBBP7Q16576 425 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 PHKG1Q16816 387 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 SPRED3Q2MJR0 410 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 KHDC1Q4VXA5 237 aaKnown RBP12.85□□□□□ -0.35
SLIRP-201ENST00000238688 XKR7Q5GH72 579 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 LARP4Q71RC2 724 aaKnown RBP eCLIP12.85□□□□□ -0.352e-8■■□□□ 12.5
SLIRP-201ENST00000238688 GOLGA7Q7Z5G4 137 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 LRRTM4Q86VH4 590 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 TRAPPC5Q8IUR0 188 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 TEX9Q8N6V9 391 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 CCDC97Q96F63 343 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-201ENST00000238688 OR52B2Q96RD2 323 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 TIMM29Q9BSF4 260 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 PCED1AQ9H1Q7 454 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 OR2AG1Q9H205 316 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 IL21RQ9HBE5 538 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 ARL8BQ9NVJ2 186 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 GPRC5BQ9NZH0 403 aa12.85□□□□□ -0.35
SLIRP-201ENST00000238688 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-201ENST00000238688 IGLON5A6NGN9 336 aa12.84□□□□□ -0.35
SLIRP-201ENST00000238688 NCF1BA6NI72 391 aaPredicted RBP12.84□□□□□ -0.35
SLIRP-201ENST00000238688 OR2AG2A6NM03 316 aa12.84□□□□□ -0.35
SLIRP-201ENST00000238688 BBIP1A8MTZ0 92 aa12.84□□□□□ -0.35
SLIRP-201ENST00000238688 NCF1CA8MVU1 366 aaPredicted RBP12.84□□□□□ -0.35
SLIRP-201ENST00000238688 E9PBE3 544 aa12.84□□□□□ -0.35
SLIRP-201ENST00000238688 BCAT2O15382 392 aaPredicted RBP12.84□□□□□ -0.35
SLIRP-201ENST00000238688 KLHL41O60662 606 aa12.84□□□□□ -0.35
SLIRP-201ENST00000238688 KRT6AP02538 564 aa12.84□□□□□ -0.35
SLIRP-201ENST00000238688 KRT6BP04259 564 aa12.84□□□□□ -0.35
SLIRP-201ENST00000238688 SYPP08247 313 aa12.84□□□□□ -0.35
SLIRP-201ENST00000238688 PRR35P0CG20 571 aa12.84□□□□□ -0.35
SLIRP-201ENST00000238688 HGFP14210 728 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms