RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 A0A1W2PQ45 241 aaPredicted RBP18.27■□□□□ 0.51
CPSF3-201ENST00000238112 A0A1W2PQY0 241 aa18.27■□□□□ 0.51
CPSF3-201ENST00000238112 SMAD6O43541 496 aaKnown RBP18.27■□□□□ 0.51
CPSF3-201ENST00000238112 DNAJB5O75953 348 aa18.27■□□□□ 0.51
CPSF3-201ENST00000238112 PRPS2P11908 318 aa18.27■□□□□ 0.51
CPSF3-201ENST00000238112 MYCLP1P12525 358 aaPredicted RBP18.27■□□□□ 0.51
CPSF3-201ENST00000238112 RPIAP49247 311 aa18.27■□□□□ 0.51
CPSF3-201ENST00000238112 PHC1P78364 1004 aa18.27■□□□□ 0.51
CPSF3-201ENST00000238112 PHEXP78562 749 aa18.27■□□□□ 0.51
CPSF3-201ENST00000238112 SPIDRQ14159 915 aa18.27■□□□□ 0.51
CPSF3-201ENST00000238112 PGS1Q32NB8 556 aa18.27■□□□□ 0.51
CPSF3-201ENST00000238112 DCP2Q8IU60 420 aaKnown RBP18.27■□□□□ 0.51
CPSF3-201ENST00000238112 PLPP6Q8IY26 295 aa18.27■□□□□ 0.51
CPSF3-201ENST00000238112 ADGRG2Q8IZP9 1017 aa18.27■□□□□ 0.51
CPSF3-201ENST00000238112 FAM9CQ8IZT9 166 aa18.27■□□□□ 0.51
CPSF3-201ENST00000238112 REXO5Q96IC2 774 aaKnown RBP18.27■□□□□ 0.51
CPSF3-201ENST00000238112 ELOVL6Q9H5J4 265 aa18.27■□□□□ 0.51
CPSF3-201ENST00000238112 SERHLQ9NQF3 203 aa18.27■□□□□ 0.51
CPSF3-201ENST00000238112 DNMT3BQ9UBC3 853 aaKnown RBP18.27■□□□□ 0.51
CPSF3-201ENST00000238112 PFKLP17858 780 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 ITIH1P19827 911 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 RYKP34925 604 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 MAPK8P45983 427 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 GZMMP51124 257 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 IL5RAQ01344 420 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 VEPH1Q14D04 833 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 LAIR2Q6ISS4 152 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 CES5AQ6NT32 575 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 C10orf111Q8N326 155 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 ALG14Q96F25 216 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 TSSK3Q96PN8 268 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 INPP5KQ9BT40 448 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 EXD2Q9NVH0 621 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 SNX6Q9UNH7 406 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 ZNF510Q9Y2H8 683 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 BACE2Q9Y5Z0 518 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 PLXNA4Q9HCM2 1894 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 WNT9AO14904 365 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 SLC16A6O15403 523 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 LATS1O95835 1130 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 CBSLP0DN79 551 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 IGFBP5P24593 272 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 CBSP35520 551 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 NSG1P42857 185 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 ALDH7A1P49419 539 aaKnown RBP18.26■□□□□ 0.51
CPSF3-201ENST00000238112 ABHD18Q0P651 414 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 CDKN3Q16667 212 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 DPY19L1Q2PZI1 675 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 ZC3H12BQ5HYM0 836 aaKnown RBP18.26■□□□□ 0.51
CPSF3-201ENST00000238112 TPGS1Q6ZTW0 290 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 ZDHHC21Q8IVQ6 265 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 APCDD1Q8J025 514 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 CENPSQ8N2Z9 138 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 OR10Q1Q8NGQ4 319 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 FKBP10Q96AY3 582 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 ATP13A3Q9H7F0 1226 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 RNF186Q9NXI6 227 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 TMEFF2Q9UIK5 374 aaPredicted RBP18.26■□□□□ 0.51
CPSF3-201ENST00000238112 ENPP5Q9UJA9 477 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 YIPF1Q9Y548 306 aa18.26■□□□□ 0.51
CPSF3-201ENST00000238112 SOCS5O75159 536 aa18.25■□□□□ 0.51
CPSF3-201ENST00000238112 BCAS1O75363 584 aaPredicted RBP18.25■□□□□ 0.51
CPSF3-201ENST00000238112 CCDC159P0C7I6 412 aa18.25■□□□□ 0.51
CPSF3-201ENST00000238112 NR4A1P22736 598 aa18.25■□□□□ 0.51
CPSF3-201ENST00000238112 HTR1BP28222 390 aa18.25■□□□□ 0.51
CPSF3-201ENST00000238112 MAPK1P28482 360 aa18.25■□□□□ 0.51
CPSF3-201ENST00000238112 PSMD7P51665 324 aa18.25■□□□□ 0.51
CPSF3-201ENST00000238112 ATP1A4Q13733 1029 aa18.25■□□□□ 0.51
CPSF3-201ENST00000238112 SPCS2Q15005 226 aa18.25■□□□□ 0.51
CPSF3-201ENST00000238112 NAT16Q8N8M0 369 aa18.25■□□□□ 0.51
CPSF3-201ENST00000238112 ZIC5Q96T25 663 aa18.25■□□□□ 0.51
CPSF3-201ENST00000238112 SAMD4AQ9UPU9 718 aaKnown RBP18.25■□□□□ 0.51
CPSF3-201ENST00000238112 CORINQ9Y5Q5 1042 aa18.25■□□□□ 0.51
CPSF3-201ENST00000238112 DGKBQ9Y6T7 804 aa18.25■□□□□ 0.51
CPSF3-201ENST00000238112 ZNF682O95780 498 aa18.24■□□□□ 0.51
CPSF3-201ENST00000238112 ITGAMP11215 1152 aa18.24■□□□□ 0.51
CPSF3-201ENST00000238112 CAP1Q01518 475 aa18.24■□□□□ 0.51
CPSF3-201ENST00000238112 SHQ1Q6PI26 577 aaKnown RBP18.24■□□□□ 0.51
CPSF3-201ENST00000238112 CBARPQ8N350 705 aaPredicted RBP18.24■□□□□ 0.51
CPSF3-201ENST00000238112 BEND7Q8N7W2 519 aaPredicted RBP18.24■□□□□ 0.51
CPSF3-201ENST00000238112 SLC43A3Q8NBI5 491 aa18.24■□□□□ 0.51
CPSF3-201ENST00000238112 SETD9Q8NE22 299 aa18.24■□□□□ 0.51
CPSF3-201ENST00000238112 ZNF461Q8TAF7 563 aa18.24■□□□□ 0.51
CPSF3-201ENST00000238112 CNIH3Q8TBE1 160 aa18.24■□□□□ 0.51
CPSF3-201ENST00000238112 SKA2Q8WVK7 121 aaPredicted RBP18.24■□□□□ 0.51
CPSF3-201ENST00000238112 TRMT2BQ96GJ1 504 aaKnown RBP18.24■□□□□ 0.51
CPSF3-201ENST00000238112 TNKS2Q9H2K2 1166 aa18.24■□□□□ 0.51
CPSF3-201ENST00000238112 PAK1IP1Q9NWT1 392 aaPredicted RBP18.24■□□□□ 0.51
CPSF3-201ENST00000238112 COQ6Q9Y2Z9 468 aa18.24■□□□□ 0.51
CPSF3-201ENST00000238112 SH3GLB1Q9Y371 365 aa18.24■□□□□ 0.51
CPSF3-201ENST00000238112 NAALAD2Q9Y3Q0 740 aa18.24■□□□□ 0.51
CPSF3-201ENST00000238112 RFXANKO14593 260 aa18.24■□□□□ 0.51
CPSF3-201ENST00000238112 XYLBO75191 536 aa18.24■□□□□ 0.51
CPSF3-201ENST00000238112 NDUFS2O75306 463 aa18.24■□□□□ 0.51
CPSF3-201ENST00000238112 INMTO95050 263 aa18.24■□□□□ 0.51
CPSF3-201ENST00000238112 CCNDBP1O95273 360 aa18.24■□□□□ 0.51
CPSF3-201ENST00000238112 ANGPTL1O95841 491 aa18.24■□□□□ 0.51
CPSF3-201ENST00000238112 EPORP19235 508 aa18.24■□□□□ 0.51
CPSF3-201ENST00000238112 PCMT1P22061 227 aa18.24■□□□□ 0.51
CPSF3-201ENST00000238112 TM4SF4P48230 202 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms