RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 LIX1Q8N485 282 aa13.67□□□□□ -0.22
SCNN1A-201ENST00000228916 MDGA1Q8NFP4 955 aa13.67□□□□□ -0.22
SCNN1A-201ENST00000228916 C6orf62Q9GZU0 229 aaPredicted RBP13.67□□□□□ -0.22
SCNN1A-201ENST00000228916 IPPKQ9H8X2 491 aa13.67□□□□□ -0.22
SCNN1A-201ENST00000228916 ZNF408Q9H9D4 720 aa13.67□□□□□ -0.22
SCNN1A-201ENST00000228916 ASIC5Q9NY37 505 aa13.67□□□□□ -0.22
SCNN1A-201ENST00000228916 AGO1Q9UL18 857 aaKnown RBP13.67□□□□□ -0.22
SCNN1A-201ENST00000228916 M0R082 166 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 DSCR3O14972 297 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 PER2O15055 1255 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 ITGB1P05556 798 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 HOXB9P17482 250 aaPredicted RBP13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 GTF2E2P29084 291 aaKnown RBP13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 CLCN4P51793 760 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 ARHGDIAP52565 204 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 CACNB2Q08289 660 aaPredicted RBP13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 KRR1Q13601 381 aaKnown RBP13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 SYT16Q17RD7 645 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 KIAA1614Q5VZ46 1190 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 USP43Q70EL4 1123 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 GDPD3Q7L5L3 318 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 GLT6D1Q7Z4J2 308 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 MILR1Q7Z6M3 343 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 PARP16Q8N5Y8 322 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 CDADC1Q9BWV3 514 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 PDFQ9HBH1 243 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 SERHLQ9NQF3 203 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 DRGXA6NNA5 263 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 FPR1P21462 350 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 DNAJA1P31689 397 aaKnown RBP13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 TTPAP49638 278 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 COPZ1P61923 177 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 PRSS36Q5K4E3 855 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 SUSD1Q6UWL2 747 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 AMER2Q8N7J2 671 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 IL17RDQ8NFM7 739 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 APH1BQ8WW43 257 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 UBE2FQ969M7 185 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 MS4A4AQ96JQ5 239 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 ZMYM5Q9UJ78 669 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 SAMD4AQ9UPU9 718 aaKnown RBP13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 RNF6Q9Y252 685 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 MAN2B2Q9Y2E5 1009 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 DOCK3Q8IZD9 2030 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 A0A096LPI6 279 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 WNT9AO14904 365 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 PCDHGA12O60330 932 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 PGLSO95336 258 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 KRT75O95678 551 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 CTSKP43235 329 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 TRPC1P48995 793 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 YBEYP58557 167 aaPredicted RBP13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 GTF2H3Q13889 308 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 CACHD1Q5VU97 1274 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 SBSNQ6UWP8 590 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 CIR1Q86X95 450 aaPredicted RBP13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 SLC10A4Q96EP9 437 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 OR2B2Q9GZK3 357 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 KCNH6Q9H252 994 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 FLRT1Q9NZU1 646 aa13.66□□□□□ -0.22
SCNN1A-201ENST00000228916 FAM172BPA6NC97 362 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 M0QZQ0 153 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 SLC28A1O00337 649 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 CCNDBP1O95273 360 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 GADD45AP24522 165 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 PTPN6P29350 595 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 GNPDA1P46926 289 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 CSNK2BP67870 215 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 ABHD18Q0P651 414 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 CAMK2BQ13554 666 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 TBCEQ15813 527 aaPredicted RBP13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 LDLRAD1Q5T700 205 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 AGAP6Q5VW22 663 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 RAP1GAP2Q684P5 730 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 TRIM46Q7Z4K8 759 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 MON1AQ86VX9 555 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 SPATA2LQ8IUW3 424 aaPredicted RBP13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 ELMOD1Q8N336 334 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 CEP295NLQ96MC4 621 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 AGAP4Q96P64 663 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 SGIP1Q9BQI5 828 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 MGME1Q9BQP7 344 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 ZBED2Q9BTP6 218 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 ZFP14Q9HCL3 533 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 RASSF1Q9NS23 344 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 QPCTLQ9NXS2 382 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 NPAP1Q9NZP6 1156 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 CCDC59Q9P031 241 aaKnown RBP13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 CCNKO75909 580 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 SNX4O95219 450 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 SEMG1P04279 462 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 CTSHP09668 335 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 OR4Q2P0C623 313 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 MYCLP1P12525 358 aaPredicted RBP13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 CLCN7P51798 805 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 HMGCS1Q01581 520 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 CREMQ03060 361 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 RSBN1Q5VWQ0 802 aaPredicted RBP13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 OVOS1Q6IE37 1185 aa13.65□□□□□ -0.22
SCNN1A-201ENST00000228916 PLEKHH3Q7Z736 793 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms