RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 UMODL1-AS1Q8N2C9 162 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 OR52B6Q8NGF0 335 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 TBATAQ96M53 351 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 KLHL5Q96PQ7 755 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 SNX18Q96RF0 628 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 ROGDIQ9GZN7 287 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 MFSD1Q9H3U5 465 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 TAS2R16Q9NYV7 291 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 RNF6Q9Y252 685 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 PCDHGB1Q9Y5G3 927 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 A0A1W2PQH9 124 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 SAGE2PA6NJ88 616 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 TSPAN3O60637 253 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 APOA1P02647 267 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 SLC26A3P40879 764 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 KRT6CP48668 564 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 DAPP51397 102 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 CREMQ03060 361 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 LCP2Q13094 533 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 PRKG2Q13237 762 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 PON2Q15165 354 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 C18orf21Q32NC0 220 aaPredicted RBP13.78□□□□□ -0.2
SF1-201ENST00000227503 COQ5Q5HYK3 327 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 OVOS1Q6IE37 1185 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 ZNF683Q8IZ20 524 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 FBXO39Q8N4B4 442 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 CLHC1Q8NHS4 586 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 NETO1Q8TDF5 533 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 HMCESQ96FZ2 354 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 C1orf74Q96LT6 269 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 ZNF717Q9BY31 904 aaPredicted RBP13.78□□□□□ -0.2
SF1-201ENST00000227503 TOR4AQ9NXH8 423 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 FNIP2Q9P278 1114 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 RNF112Q9ULX5 631 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 ABCG2Q9UNQ0 655 aa13.78□□□□□ -0.2
SF1-201ENST00000227503 UBA6A0AVT1 1052 aaPredicted RBP13.77□□□□□ -0.2
SF1-201ENST00000227503 TBKBP1A7MCY6 615 aa13.77□□□□□ -0.2
SF1-201ENST00000227503 hCG_2039718K7EN88 272 aa13.77□□□□□ -0.2
SF1-201ENST00000227503 CXCR6O00574 342 aa13.77□□□□□ -0.2
SF1-201ENST00000227503 KATNA1O75449 491 aa13.77□□□□□ -0.2
SF1-201ENST00000227503 VIPP01282 170 aa13.77□□□□□ -0.2
SF1-201ENST00000227503 ITGB1P05556 798 aa13.77□□□□□ -0.2
SF1-201ENST00000227503 HAPLN1P10915 354 aaPredicted RBP13.77□□□□□ -0.2
SF1-201ENST00000227503 RYKP34925 604 aa13.77□□□□□ -0.2
SF1-201ENST00000227503 RENBPP51606 427 aa13.77□□□□□ -0.2
SF1-201ENST00000227503 DSC2Q02487 901 aa13.77□□□□□ -0.2
SF1-201ENST00000227503 SDE2Q6IQ49 451 aa13.77□□□□□ -0.2
SF1-201ENST00000227503 ERAP2Q6P179 960 aa13.77□□□□□ -0.2
SF1-201ENST00000227503 LINC00299Q6ZSB3 139 aa13.77□□□□□ -0.2
SF1-201ENST00000227503 LRRC8DQ7L1W4 858 aa13.77□□□□□ -0.2
SF1-201ENST00000227503 TRIM48Q8IWZ4 208 aa13.77□□□□□ -0.2
SF1-201ENST00000227503 DTX3Q8N9I9 347 aa13.77□□□□□ -0.2
SF1-201ENST00000227503 OR5K1Q8NHB7 308 aa13.77□□□□□ -0.2
SF1-201ENST00000227503 CHAC2Q8WUX2 184 aa13.77□□□□□ -0.2
SF1-201ENST00000227503 DNASE1L2Q92874 299 aa13.77□□□□□ -0.2
SF1-201ENST00000227503 ATOH8Q96SQ7 321 aa13.77□□□□□ -0.2
SF1-201ENST00000227503 TMEM39AQ9NV64 488 aa13.77□□□□□ -0.2
SF1-201ENST00000227503 USE1Q9NZ43 259 aa13.77□□□□□ -0.2
SF1-201ENST00000227503 FNDC3AQ9Y2H6 1198 aaKnown RBP13.77□□□□□ -0.2
SF1-201ENST00000227503 FAM234BA2RU67 622 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 NPEPPSL1A6NEC2 478 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 F8W810 466 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 M0R129 80 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 GRIK1P39086 918 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 NFKB2Q00653 900 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 FXNQ16595 210 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 GDF6Q6KF10 455 aaPredicted RBP13.77□□□□□ -0.21
SF1-201ENST00000227503 ZNF548Q8NEK5 533 aaPredicted RBP13.77□□□□□ -0.21
SF1-201ENST00000227503 FATE1Q969F0 183 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 PHOX2BQ99453 314 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 PRDM5Q9NQX1 630 aaPredicted RBP13.77□□□□□ -0.21
SF1-201ENST00000227503 MAT2BQ9NZL9 334 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 CRNNQ9UBG3 495 aaPredicted RBP13.77□□□□□ -0.21
SF1-201ENST00000227503 ZNF451Q9Y4E5 1061 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 DNMT3AQ9Y6K1 912 aaPredicted RBP13.77□□□□□ -0.21
SF1-201ENST00000227503 LOC110117498-PIK3R3F6TDL0 507 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 TLL1O43897 1013 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 TMCC2O75069 709 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 ECI2O75521 394 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 DNAJB5O75953 348 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 ZNF682O95780 498 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 SLC10A3P09131 477 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 TGM4P49221 684 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 SIRPB2Q5JXA9 342 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 ZNF648Q5T619 568 aaPredicted RBP13.77□□□□□ -0.21
SF1-201ENST00000227503 SPRYD7Q5W111 196 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 ZNF517Q6ZMY9 492 aaPredicted RBP13.77□□□□□ -0.21
SF1-201ENST00000227503 Q6ZSR9 355 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 SPATA2LQ8IUW3 424 aaPredicted RBP13.77□□□□□ -0.21
SF1-201ENST00000227503 CHPFQ8IZ52 775 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 KIAA1958Q8N8K9 716 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 SPERTQ8NA61 448 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 SLC38A4Q969I6 547 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 TADA1Q96BN2 335 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 SLC39A13Q96H72 371 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 RDH12Q96NR8 316 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 ITPAQ9BY32 194 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 EIF2B4Q9UI10 523 aaKnown RBP13.77□□□□□ -0.21
SF1-201ENST00000227503 GABRQQ9UN88 632 aa13.77□□□□□ -0.21
SF1-201ENST00000227503 BTBD3Q9Y2F9 522 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms