RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 LAMTOR5O43504 91 aa18.06■□□□□ 0.48
CLIP2-201ENST00000223398 KLHL18O94889 574 aa18.06■□□□□ 0.48
CLIP2-201ENST00000223398 CDK9P50750 372 aaKnown RBP18.06■□□□□ 0.48
CLIP2-201ENST00000223398 ZNF542PQ5EBM4 170 aa18.06■□□□□ 0.48
CLIP2-201ENST00000223398 C1orf52Q8N6N3 182 aaKnown RBP18.06■□□□□ 0.48
CLIP2-201ENST00000223398 VPS29Q9UBQ0 182 aa18.06■□□□□ 0.48
CLIP2-201ENST00000223398 TGM5O43548 720 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 GBAP04062 536 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 GJA5P36382 358 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 GALNT2Q10471 571 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 ERN2Q76MJ5 926 aaKnown RBP18.05■□□□□ 0.48
CLIP2-201ENST00000223398 SAMD14Q8IZD0 417 aaPredicted RBP18.05■□□□□ 0.48
CLIP2-201ENST00000223398 SMPDL3AQ92484 453 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 EFCAB11Q9BUY7 163 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 C11orf16Q9NQ32 467 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 KHNYNO15037 678 aaKnown RBP18.05■□□□□ 0.48
CLIP2-201ENST00000223398 KHDRBS3O75525 346 aaKnown RBP18.05■□□□□ 0.48
CLIP2-201ENST00000223398 SLC7A1P30825 629 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 CXorf57Q6NSI4 855 aaKnown RBP18.05■□□□□ 0.48
CLIP2-201ENST00000223398 HCAR2Q8TDS4 363 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 OVCA2Q8WZ82 227 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 SMARCD2Q92925 531 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 SSR3Q9UNL2 185 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 FAM72CH0Y354 149 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 H3BQ06 376 aaPredicted RBP18.05■□□□□ 0.48
CLIP2-201ENST00000223398 NME6O75414 186 aaPredicted RBP18.05■□□□□ 0.48
CLIP2-201ENST00000223398 CSNK2A2P19784 350 aaPredicted RBP18.05■□□□□ 0.48
CLIP2-201ENST00000223398 GRK6P43250 576 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 PAFAH1B3Q15102 231 aaKnown RBP18.05■□□□□ 0.48
CLIP2-201ENST00000223398 PYDC2Q56P42 97 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 RNASE12Q5GAN4 147 aaKnown RBP18.05■□□□□ 0.48
CLIP2-201ENST00000223398 FAM72AQ5TYM5 149 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 FAM72DQ6L9T8 149 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 FAM72BQ86X60 149 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 TMEM156Q8N614 296 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 BANPQ8N9N5 519 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 ZHX1-C8orf76Q96EF9 292 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 C1GALT1C1Q96EU7 318 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 NUSAP1Q9BXS6 441 aaKnown RBP18.05■□□□□ 0.48
CLIP2-201ENST00000223398 ELAC1Q9H777 363 aaKnown RBP18.05■□□□□ 0.48
CLIP2-201ENST00000223398 GALPQ9UBC7 116 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 STYXL1Q9Y6J8 313 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 HNRNPA1P09651 372 aaKnown RBP eCLIP18.05■□□□□ 0.48
CLIP2-201ENST00000223398 C8orf89P0DMQ9 161 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 GRHL3Q8TE85 626 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 SNX33Q8WV41 574 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 SLC32A1Q9H598 525 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 SLC35C2Q9NQQ7 365 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 FLRT1Q9NZU1 646 aa18.05■□□□□ 0.48
CLIP2-201ENST00000223398 TMCC2O75069 709 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 TIMP1P01033 207 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 AHSGP02765 367 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 ALPPP05187 535 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 EDNRBP24530 442 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 IQCHQ86VS3 1027 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 TMEM126BQ8IUX1 230 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 ARHGAP9Q9BRR9 750 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 TPSD1Q9BZJ3 242 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 XKR8Q9H6D3 395 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 SQORQ9Y6N5 450 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 GSC2O15499 205 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 CNMDO75829 334 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 SERPINA1P01009 418 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 ASTE1Q2TB18 679 aaPredicted RBP18.04■□□□□ 0.48
CLIP2-201ENST00000223398 DPY19L3Q6ZPD9 716 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 NUP54Q7Z3B4 507 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 APLFQ8IW19 511 aaPredicted RBP18.04■□□□□ 0.48
CLIP2-201ENST00000223398 GLIS1Q8NBF1 620 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 IGSF8Q969P0 613 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 FEM1AQ9BSK4 669 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 IL21RQ9HBE5 538 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 AK5Q9Y6K8 562 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 TTC34A8MYJ7 566 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 PEX12O00623 359 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 LNX2Q8N448 690 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 FAM47BQ8NA70 645 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 NOL6Q9H6R4 1146 aaKnown RBP18.04■□□□□ 0.48
CLIP2-201ENST00000223398 RC3H2Q9HBD1 1191 aaKnown RBP18.04■□□□□ 0.48
CLIP2-201ENST00000223398 FNIP2Q9P278 1114 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 C10orf71Q711Q0 1435 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 KAT7O95251 611 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 GANABQ14697 944 aaKnown RBP18.04■□□□□ 0.48
CLIP2-201ENST00000223398 UBAP2Q5T6F2 1119 aaKnown RBP18.04■□□□□ 0.48
CLIP2-201ENST00000223398 GPR107Q5VW38 600 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 OSBPL11Q9BXB4 747 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 TMEM138Q9NPI0 162 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 IMPDH1P20839 514 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 FRRS1Q6ZNA5 592 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 PLA2G15Q8NCC3 412 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 LRRC15Q8TF66 581 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 PLGRKTQ9HBL7 147 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 LGALS13Q9UHV8 139 aa18.04■□□□□ 0.48
CLIP2-201ENST00000223398 JUNP05412 331 aaKnown RBP18.03■□□□□ 0.48
CLIP2-201ENST00000223398 TMEM115Q12893 351 aaPredicted RBP18.03■□□□□ 0.48
CLIP2-201ENST00000223398 PON2Q15165 354 aa18.03■□□□□ 0.48
CLIP2-201ENST00000223398 CYP1B1Q16678 543 aa18.03■□□□□ 0.48
CLIP2-201ENST00000223398 PQLC1Q8N2U9 271 aa18.03■□□□□ 0.48
CLIP2-201ENST00000223398 MCUBQ9NWR8 336 aa18.03■□□□□ 0.48
CLIP2-201ENST00000223398 OAS3Q9Y6K5 1087 aaKnown RBP18.03■□□□□ 0.48
CLIP2-201ENST00000223398 ZNF840PA6NDX5 716 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms