RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 C8orf59Q8N0T1 100 aaPredicted RBP14.26□□□□□ -0.13
CNOT3-201ENST00000221232 P2RY13Q9BPV8 354 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 HTATIP2Q9BUP3 242 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 OSBPL6Q9BZF3 934 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 LHPPQ9H008 270 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 MTG2Q9H4K7 406 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 CLMPQ9H6B4 373 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 LSM7Q9UK45 103 aaKnown RBP14.26□□□□□ -0.13
CNOT3-201ENST00000221232 PPT2Q9UMR5 302 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 TANC1Q9C0D5 1861 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 DYTNA2CJ06 578 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 TTC36A6NLP5 189 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 CPSF4O95639 269 aaKnown RBP14.26□□□□□ -0.13
CNOT3-201ENST00000221232 KRT6AP02538 564 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 KRT6BP04259 564 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 URODP06132 367 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 SRCP12931 536 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 NSG1P42857 185 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 KRT6CP48668 564 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 HLCSP50747 726 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 ABRQ12979 859 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 TSTA3Q13630 321 aaPredicted RBP14.26□□□□□ -0.13
CNOT3-201ENST00000221232 SIM2Q14190 667 aaPredicted RBP14.26□□□□□ -0.13
CNOT3-201ENST00000221232 CTU2Q2VPK5 515 aaKnown RBP14.26□□□□□ -0.13
CNOT3-201ENST00000221232 DPY19L3Q6ZPD9 716 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 RBM23Q86U06 439 aaKnown RBP14.26□□□□□ -0.13
CNOT3-201ENST00000221232 ERLEC1Q96DZ1 483 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 CCDC138Q96M89 665 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 MTERF1Q99551 399 aaKnown RBP14.26□□□□□ -0.13
CNOT3-201ENST00000221232 SLC32A1Q9H598 525 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 DNAJB9Q9UBS3 223 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 CCL26Q9Y258 94 aa14.26□□□□□ -0.13
CNOT3-201ENST00000221232 MYO7AQ13402 2215 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.25□□□□□ -0.13
CNOT3-201ENST00000221232 PER2O15055 1255 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 PRAMEF4O60810 478 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 HIST1H2AGP0C0S8 130 aaPredicted RBP14.25□□□□□ -0.13
CNOT3-201ENST00000221232 HIST1H2ADP20671 130 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 PRAMEF9Q5VWM5 478 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 ELMSAN1Q6PJG2 1045 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 ZNF783Q6ZMS7 281 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 Q6ZNB5 142 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 Q6ZVU0 165 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 TRIM46Q7Z4K8 759 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 ZNF555Q8NEP9 628 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 OR7A2PQ8NGA2 310 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 SORCS1Q8WY21 1168 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 SNX19Q92543 992 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 HIST1H2AHQ96KK5 128 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 MBOAT4Q96T53 435 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 HIST1H2AJQ99878 128 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 DPH2Q9BQC3 489 aaPredicted RBP14.25□□□□□ -0.13
CNOT3-201ENST00000221232 H2AFJQ9BTM1 129 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 NTMT1Q9BV86 223 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 KAT8Q9H7Z6 458 aaKnown RBP14.25□□□□□ -0.13
CNOT3-201ENST00000221232 TMEM165Q9HC07 324 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 KCTD5Q9NXV2 234 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 DGKBQ9Y6T7 804 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 hCG_2039718K7EN88 272 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 XPNPEP2O43895 674 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 XYLBO75191 536 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 HLA-FP30511 346 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 MAD2L1Q13257 205 aaPredicted RBP14.25□□□□□ -0.13
CNOT3-201ENST00000221232 FXNQ16595 210 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 ZCCHC8Q6NZY4 707 aaKnown RBP14.25□□□□□ -0.13
CNOT3-201ENST00000221232 ZNF621Q6ZSS3 439 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 ZNF551Q7Z340 670 aaPredicted RBP14.25□□□□□ -0.13
CNOT3-201ENST00000221232 CNIH3Q8TBE1 160 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 MRPS31Q92665 395 aaKnown RBP14.25□□□□□ -0.13
CNOT3-201ENST00000221232 CAPNS2Q96L46 248 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 SUV39H2Q9H5I1 410 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 GORASP2Q9H8Y8 452 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 KIAA1522Q9P206 1035 aaPredicted RBP14.25□□□□□ -0.13
CNOT3-201ENST00000221232 STOML2Q9UJZ1 356 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 TMPRSS11EQ9UL52 423 aa14.25□□□□□ -0.13
CNOT3-201ENST00000221232 TRBV5-4A0A0C4DH59 114 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 TRIM64CA6NLI5 447 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 J3QRK9 145 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 FTH1P02794 183 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 DEFB103AP81534 67 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 TPGS2Q68CL5 300 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 ADNP2Q6IQ32 1131 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 TRIM74Q86UV6 250 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 TRIM73Q86UV7 250 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 TMEM25Q86YD3 366 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 FBXL8Q96CD0 374 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 TRMT2BQ96GJ1 504 aaKnown RBP14.24□□□□□ -0.13
CNOT3-201ENST00000221232 ZNF558Q96NG5 402 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 CORO1BQ9BR76 489 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 VNN3Q9NY84 501 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 ZDHHC3Q9NYG2 299 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 B4GALT6Q9UBX8 382 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 MYOFQ9NZM1 2061 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 GBF1Q92538 1859 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 PABPN1LA6NDY0 278 aaKnown RBP14.24□□□□□ -0.13
CNOT3-201ENST00000221232 H0YAE9 185 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 RFXANKO14593 260 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 SDC1P18827 310 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 MSH3P20585 1137 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 CD47Q08722 323 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms