RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 MSANTD1Q6ZTZ1 278 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 TAS1R1Q7RTX1 841 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 TRIM74Q86UV6 250 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 TRIM73Q86UV7 250 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 ELMOD1Q8N336 334 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 ZBTB8BQ8NAP8 495 aaPredicted RBP12.99□□□□□ -0.33
SRP54-201ENST00000216774 TESCQ96BS2 214 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 TMEM175Q9BSA9 504 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 ACPTQ9BZG2 426 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 KLHL42Q9P2K6 505 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 DNMT3BQ9UBC3 853 aaKnown RBP12.99□□□□□ -0.33
SRP54-201ENST00000216774 SAMD4AQ9UPU9 718 aaKnown RBP12.99□□□□□ -0.33
SRP54-201ENST00000216774 ERVW-1Q9UQF0 538 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 OR51B4Q9Y5P0 310 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 GLYATL1P3A0A0U1RQE8 302 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.99□□□□□ -0.33
SRP54-201ENST00000216774 CLDN25C9JDP6 229 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 ADAM12O43184 909 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 TBL1XO60907 577 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 GABARAPO95166 117 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 CCNDBP1O95273 360 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 LATS1O95835 1130 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 TRBC1P01850 177 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 FUCA1P04066 466 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 UGT2B4P06133 528 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 PRKACGP22612 351 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 PRPH2P23942 346 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 IGFBP5P24593 272 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 PTPN6P29350 595 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 PSMD7P51665 324 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 PHC1P78364 1004 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 PRKCZQ05513 592 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 CPZQ66K79 652 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 IGFN1Q86VF2 1251 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 DCAF4L2Q8NA75 395 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 SH3YL1Q96HL8 342 aaPredicted RBP12.99□□□□□ -0.33
SRP54-201ENST00000216774 RNF38Q9H0F5 515 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 HMG20AQ9NP66 347 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 CRLS1Q9UJA2 301 aa12.99□□□□□ -0.33
SRP54-201ENST00000216774 ZNF106Q9H2Y7 1883 aaKnown RBP12.98□□□□□ -0.33
SRP54-201ENST00000216774 PTGES3LE9PB15 166 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 SLC22A1O15245 554 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 INMTO95050 263 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 GALTP07902 379 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 ANXA5P08758 320 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 ACPPP15309 386 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 JUNDP17535 347 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 PFKLP17858 780 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 MAPK1P28482 360 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 GGT5P36269 586 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 OPRL1P41146 370 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 MAPK8P45983 427 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 GATMP50440 423 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 CXCR4P61073 352 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 PIGFQ07326 219 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 ATP1A4Q13733 1029 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 KEAP1Q14145 624 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 ARHGEF7Q14155 803 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 CDKN3Q16667 212 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 GGTA1PQ4G0N0 100 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 CES5AQ6NT32 575 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 TMEM173Q86WV6 379 aaPredicted RBP12.98□□□□□ -0.33
SRP54-201ENST00000216774 ZDHHC21Q8IVQ6 265 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 CBARPQ8N350 705 aaPredicted RBP12.98□□□□□ -0.33
SRP54-201ENST00000216774 TMCO5AQ8N6Q1 288 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 HJURPQ8NCD3 748 aaPredicted RBP12.98□□□□□ -0.33
SRP54-201ENST00000216774 CLHC1Q8NHS4 586 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 FAR1Q8WVX9 515 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 WBP2Q969T9 261 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 VMP1Q96GC9 406 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 WDR12Q9GZL7 423 aaKnown RBP12.98□□□□□ -0.33
SRP54-201ENST00000216774 SLC32A1Q9H598 525 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 KCTD5Q9NXV2 234 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 MTRRQ9UBK8 725 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 DLGAP4Q9Y2H0 992 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 TMED5Q9Y3A6 229 aa12.98□□□□□ -0.33
SRP54-201ENST00000216774 NT5C1B-RDH14C9J2C7 533 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 NPIPB8E9PQR5 432 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 ARVCFO00192 962 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 ANGPTL1O95841 491 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 PDYNP01213 254 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 BPIP17213 487 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 PTPN5P54829 565 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 IL5RAQ01344 420 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 EMX1Q04741 257 aaPredicted RBP12.97□□□□□ -0.33
SRP54-201ENST00000216774 BCL2L1Q07817 233 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 PPP1R8Q12972 351 aaKnown RBP12.97□□□□□ -0.33
SRP54-201ENST00000216774 ITGADQ13349 1161 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 RAPSNQ13702 412 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 CAPN13Q6MZZ7 669 aaPredicted RBP12.97□□□□□ -0.33
SRP54-201ENST00000216774 RGMBQ6NW40 437 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 ZBTB46Q86UZ6 589 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 NXPE1Q8N323 547 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 C10orf111Q8N326 155 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 PGBD3Q8N328 593 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 BEND7Q8N7W2 519 aaPredicted RBP12.97□□□□□ -0.33
SRP54-201ENST00000216774 S100ZQ8WXG8 99 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 ALG14Q96F25 216 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 HHIPQ96QV1 700 aa12.97□□□□□ -0.33
SRP54-201ENST00000216774 MRPL9Q9BYD2 267 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms