RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 A8MT66 165 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 TMEM150CB9EJG8 249 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 KLF11O14901 512 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 UGT1A9O60656 530 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 GATBO75879 557 aaKnown RBP13.28□□□□□ -0.28
SF3A1-201ENST00000215793 EFNA1P20827 205 aaPredicted RBP13.28□□□□□ -0.28
SF3A1-201ENST00000215793 SPIN4Q56A73 249 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 PDE12Q6L8Q7 609 aaKnown RBP13.28□□□□□ -0.28
SF3A1-201ENST00000215793 GDPD4Q6W3E5 623 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 NUS1Q96E22 293 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 CST11Q9H112 138 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 UGT1A7Q9HAW7 530 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 UGT1A10Q9HAW8 530 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 UGT1A8Q9HAW9 530 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 MED31Q9Y3C7 131 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 CAMTA1Q9Y6Y1 1673 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 DAPL1A0PJW8 107 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 TSPAN5P62079 268 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 SCARB2Q14108 478 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 SLC51AQ86UW1 340 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 OR10G2Q8NGC3 310 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 LRRC58Q96CX6 371 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 FARSBQ9NSD9 589 aaKnown RBP13.28□□□□□ -0.28
SF3A1-201ENST00000215793 PRKAB1Q9Y478 270 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 GSTT2BP0CG30 244 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 MLLT6P55198 1093 aaPredicted RBP13.28□□□□□ -0.28
SF3A1-201ENST00000215793 ADAM8P78325 824 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 IRF9Q00978 393 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 ZNF33AQ06730 810 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 RASGEF1BQ0VAM2 473 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 CRB2Q5IJ48 1285 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 FRG2Q64ET8 278 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 FRG2BQ96QU4 278 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 CGREF1Q99674 301 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 SLC29A3Q9BZD2 475 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 WDR26Q9H7D7 661 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 ABI3Q9P2A4 366 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 FABP12A6NFH5 140 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 CLIC1O00299 241 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 NRP1O14786 923 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 ECI2O75521 394 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 PGLSO95336 258 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 C8BP07358 591 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 ALPPL2P10696 532 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 MYCLP1P12525 358 aaPredicted RBP13.28□□□□□ -0.28
SF3A1-201ENST00000215793 MAT2AP31153 395 aaKnown RBP13.28□□□□□ -0.28
SF3A1-201ENST00000215793 SLC6A4P31645 630 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 CCKBRP32239 447 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 NCBP2P52298 156 aaKnown RBP eCLIP13.28□□□□□ -0.28
SF3A1-201ENST00000215793 PITPNAQ00169 270 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 FOXM1Q08050 763 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 SLBPQ14493 270 aaKnown RBP eCLIP13.28□□□□□ -0.28
SF3A1-201ENST00000215793 ALKBH2Q6NS38 261 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 RNF19BQ6ZMZ0 732 aa13.28□□□□□ -0.28
SF3A1-201ENST00000215793 NOBOXO60393 691 aa13.27□□□□□ -0.28
SF3A1-201ENST00000215793 DNAJA1P31689 397 aaKnown RBP13.27□□□□□ -0.28
SF3A1-201ENST00000215793 ACTR1BP42025 376 aa13.27□□□□□ -0.28
SF3A1-201ENST00000215793 ARCN1P48444 511 aaKnown RBP13.27□□□□□ -0.28
SF3A1-201ENST00000215793 ACTR1AP61163 376 aa13.27□□□□□ -0.28
SF3A1-201ENST00000215793 TMEM198Q66K66 360 aa13.27□□□□□ -0.28
SF3A1-201ENST00000215793 HDDC3Q8N4P3 179 aa13.27□□□□□ -0.28
SF3A1-201ENST00000215793 TP53INP1Q96A56 240 aa13.27□□□□□ -0.28
SF3A1-201ENST00000215793 CAPNS2Q96L46 248 aa13.27□□□□□ -0.28
SF3A1-201ENST00000215793 PCDHAC1Q9H158 963 aa13.27□□□□□ -0.28
SF3A1-201ENST00000215793 ANKHQ9HCJ1 492 aa13.27□□□□□ -0.28
SF3A1-201ENST00000215793 ZNF358Q9NW07 568 aa13.27□□□□□ -0.28
SF3A1-201ENST00000215793 CFL2Q9Y281 166 aa13.27□□□□□ -0.28
SF3A1-201ENST00000215793 CA12O43570 354 aa13.27□□□□□ -0.28
SF3A1-201ENST00000215793 TPST2O60704 377 aa13.27□□□□□ -0.28
SF3A1-201ENST00000215793 ARHGAP1Q07960 439 aa13.27□□□□□ -0.28
SF3A1-201ENST00000215793 LRRC32Q14392 662 aa13.27□□□□□ -0.28
SF3A1-201ENST00000215793 DSC3Q14574 896 aa13.27□□□□□ -0.28
SF3A1-201ENST00000215793 PDGFRLQ15198 375 aa13.27□□□□□ -0.28
SF3A1-201ENST00000215793 RBM48Q5RL73 367 aaKnown RBP13.27□□□□□ -0.28
SF3A1-201ENST00000215793 OR2AP1Q8NGE2 309 aa13.27□□□□□ -0.28
SF3A1-201ENST00000215793 OR5T3Q8NGG3 340 aa13.27□□□□□ -0.28
SF3A1-201ENST00000215793 CNDP2Q96KP4 475 aaKnown RBP13.27□□□□□ -0.28
SF3A1-201ENST00000215793 MNTQ99583 582 aa13.27□□□□□ -0.28
SF3A1-201ENST00000215793 AKTIPQ9H8T0 292 aa13.27□□□□□ -0.28
SF3A1-201ENST00000215793 TMED5Q9Y3A6 229 aa13.27□□□□□ -0.28
SF3A1-201ENST00000215793 YIPF1Q9Y548 306 aa13.27□□□□□ -0.28
SF3A1-201ENST00000215793 OR51F1A6NGY5 319 aa13.27□□□□□ -0.29
SF3A1-201ENST00000215793 TBX18O95935 607 aa13.27□□□□□ -0.29
SF3A1-201ENST00000215793 INHAP05111 366 aa13.27□□□□□ -0.29
SF3A1-201ENST00000215793 S100A6P06703 90 aa13.27□□□□□ -0.29
SF3A1-201ENST00000215793 DBIP07108 87 aaKnown RBP13.27□□□□□ -0.29
SF3A1-201ENST00000215793 CBSLP0DN79 551 aa13.27□□□□□ -0.29
SF3A1-201ENST00000215793 UGT1A6P19224 532 aa13.27□□□□□ -0.29
SF3A1-201ENST00000215793 GSTM3P21266 225 aa13.27□□□□□ -0.29
SF3A1-201ENST00000215793 UGT1A1P22309 533 aa13.27□□□□□ -0.29
SF3A1-201ENST00000215793 UGT1A4P22310 534 aa13.27□□□□□ -0.29
SF3A1-201ENST00000215793 UGT1A3P35503 534 aa13.27□□□□□ -0.29
SF3A1-201ENST00000215793 CBSP35520 551 aa13.27□□□□□ -0.29
SF3A1-201ENST00000215793 RABGGTBP53611 331 aa13.27□□□□□ -0.29
SF3A1-201ENST00000215793 SLC8B1Q6J4K2 584 aa13.27□□□□□ -0.29
SF3A1-201ENST00000215793 PAMR1Q6UXH9 720 aa13.27□□□□□ -0.29
SF3A1-201ENST00000215793 ADGRD2Q7Z7M1 963 aa13.27□□□□□ -0.29
SF3A1-201ENST00000215793 NRSN1Q8IZ57 195 aa13.27□□□□□ -0.29
SF3A1-201ENST00000215793 LINC00471Q8N535 108 aa13.27□□□□□ -0.29
SF3A1-201ENST00000215793 TMEM145Q8NBT3 493 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms