RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 CLDN19Q8N6F1 224 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 SPERTQ8NA61 448 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 PARPBPQ9NWS1 579 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 ZNF99A8MXY4 864 aaPredicted RBP13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 DHFRP00374 187 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 SERPINA3P01011 423 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 SWI5Q1ZZU3 235 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 TMEM236Q5W0B7 351 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 MRPS30Q9NP92 439 aaKnown RBP13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 ZDHHC4Q9NPG8 344 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 GRIP1Q9Y3R0 1128 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 PRKD1Q15139 912 aaPredicted RBP13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 CHRNA6Q15825 494 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 FBXO42Q6P3S6 717 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 ANKRD23Q86SG2 305 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 OR4C6Q8NH72 309 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 ZNF384Q8TF68 577 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 HNRNPABQ99729 332 aaKnown RBP13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 EHD1Q9H4M9 534 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 HOXC6P09630 235 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 ELK4P28324 431 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 CAP1Q01518 475 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 SMU1Q2TAY7 513 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 LSM14AQ8ND56 463 aaKnown RBP13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 SPPL2BQ8TCT7 592 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 HM13Q8TCT9 377 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 TMBIM1Q969X1 311 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 DUSP26Q9BV47 211 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 MYOM1P52179 1685 aa13.34□□□□□ -0.27
TGFBR3-201ENST00000212355 PER2O15055 1255 aa13.33□□□□□ -0.27
TGFBR3-201ENST00000212355 ARPC2O15144 300 aa13.33□□□□□ -0.27
TGFBR3-201ENST00000212355 PCDHGA12O60330 932 aa13.33□□□□□ -0.27
TGFBR3-201ENST00000212355 TAF1AQ15573 450 aaPredicted RBP13.33□□□□□ -0.27
TGFBR3-201ENST00000212355 MEP1AQ16819 746 aa13.33□□□□□ -0.27
TGFBR3-201ENST00000212355 C1orf109Q9NX04 203 aa13.33□□□□□ -0.27
TGFBR3-201ENST00000212355 PEAK1Q9H792 1746 aa13.33□□□□□ -0.27
TGFBR3-201ENST00000212355 MYH8P13535 1937 aa13.33□□□□□ -0.27
TGFBR3-201ENST00000212355 WWP2O00308 870 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 NDUFS4O43181 175 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 ACSL1P33121 698 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 SLBPQ14493 270 aaKnown RBP eCLIP13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 TCAIMQ8N3R3 496 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 PRDM8Q9NQV8 689 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 MTRF1O75570 445 aaKnown RBP13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 CDKL1Q00532 357 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 BLMHQ13867 455 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 NPTX1Q15818 432 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 ENPP7Q6UWV6 458 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 BRSK1Q8TDC3 778 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 LRRC58Q96CX6 371 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 SMURF2Q9HAU4 748 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 PCDHA2Q9Y5H9 948 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 ANXA2P2A6NMY6 339 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 PRKD3O94806 890 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 ANXA2P07355 339 aaKnown RBP13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 ACVR2AP27037 513 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 CDKN1CP49918 316 aaPredicted RBP13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 AIF1P55008 147 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 VBP1P61758 197 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 TSTQ16762 297 aaKnown RBP13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 SCGB2B2Q4G0G5 96 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 SFT2D3Q587I9 215 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 TRIM74Q86UV6 250 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 POLR2J2Q9GZM3 115 aaKnown RBP13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 ZNF69Q9UC07 566 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 A0A0J9YVX5 310 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 BTN3A2P78410 334 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 UGT8Q16880 541 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 PLEKHG6Q3KR16 790 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 TMEM145Q8NBT3 493 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 RBM18Q96H35 190 aaKnown RBP13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 COLEC10Q9Y6Z7 277 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 A0A1B0GVM2 712 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 CPNE3O75131 537 aaKnown RBP13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 ERN1O75460 977 aaKnown RBP13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 TSPAN5P62079 268 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 JAG1P78504 1218 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 ELP6Q0PNE2 266 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 MERTKQ12866 999 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 RABL3Q5HYI8 236 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 Q6ZVU0 165 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 EZH1Q92800 747 aaPredicted RBP13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 CCDC59Q9P031 241 aaKnown RBP13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 IFT80Q9P2H3 777 aaPredicted RBP13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 PFDN2Q9UHV9 154 aa13.33□□□□□ -0.28
TGFBR3-201ENST00000212355 AURKAO14965 403 aa13.32□□□□□ -0.28
TGFBR3-201ENST00000212355 AHSGP02765 367 aa13.32□□□□□ -0.28
TGFBR3-201ENST00000212355 S100A6P06703 90 aa13.32□□□□□ -0.28
TGFBR3-201ENST00000212355 TGFBR2P37173 567 aa13.32□□□□□ -0.28
TGFBR3-201ENST00000212355 SULT2A1Q06520 285 aa13.32□□□□□ -0.28
TGFBR3-201ENST00000212355 IFI44LQ53G44 452 aa13.32□□□□□ -0.28
TGFBR3-201ENST00000212355 ZDHHC20Q5W0Z9 365 aa13.32□□□□□ -0.28
TGFBR3-201ENST00000212355 SNX29P2Q8IUI4 249 aa13.32□□□□□ -0.28
TGFBR3-201ENST00000212355 PLD6Q8N2A8 252 aaKnown RBP13.32□□□□□ -0.28
TGFBR3-201ENST00000212355 SLC38A4Q969I6 547 aa13.32□□□□□ -0.28
TGFBR3-201ENST00000212355 HEPHQ9BQS7 1158 aa13.32□□□□□ -0.28
TGFBR3-201ENST00000212355 ACBD6Q9BR61 282 aa13.32□□□□□ -0.28
TGFBR3-201ENST00000212355 TRMOQ9BU70 441 aa13.32□□□□□ -0.28
TGFBR3-201ENST00000212355 FBXL3Q9UKT7 428 aa13.32□□□□□ -0.28
TGFBR3-201ENST00000212355 RNF11Q9Y3C5 154 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms