RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 OR52E6Q96RD3 313 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 PRPF18Q99633 342 aaKnown RBP8.05□□□□□ -1.12
VAMP3-201ENST00000054666 P2RY13Q9BPV8 354 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 THUMPD3Q9BV44 507 aaKnown RBP8.05□□□□□ -1.12
VAMP3-201ENST00000054666 OSBPL6Q9BZF3 934 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 MTG2Q9H4K7 406 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 UBAP1Q9NZ09 502 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 NDUFA13Q9P0J0 144 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 FBXO10Q9UK96 956 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 SLC22A14Q9Y267 594 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 HCFC2Q9Y5Z7 792 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 V9GYQ6 96 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 KCNE1BA0A087WTH5 132 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 C7orf72A4D263 438 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 FAM149AA5PLN7 773 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 H0Y858 1186 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 SOCS2O14508 198 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 PER2O15055 1255 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 DFNA5O60443 496 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 PGM3O95394 542 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 SMIM18P0DKX4 95 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 C7P10643 843 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 JUPP14923 745 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 ACPPP15309 386 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 PRPH2P23942 346 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 HRH2P25021 359 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 PBLDP30039 288 aaPredicted RBP8.05□□□□□ -1.12
VAMP3-201ENST00000054666 S100A3P33764 101 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 CCT8P50990 548 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 ZNF33BQ06732 778 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 KIAA0040Q15053 153 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 FAM98BQ52LJ0 330 aaKnown RBP8.05□□□□□ -1.12
VAMP3-201ENST00000054666 LIPJQ5W064 366 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 NEK5Q6P3R8 708 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 SUSD1Q6UWL2 747 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 TMEM132CQ8N3T6 1108 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 KRTCAP2Q8N6L1 136 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 GTF2H4Q92759 462 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 ZNF707Q96C28 371 aaPredicted RBP8.05□□□□□ -1.12
VAMP3-201ENST00000054666 PPP1R16AQ96I34 528 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 CCDC115Q96NT0 180 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 SEPHS2Q99611 448 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 SLC29A1Q99808 456 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 CCM2Q9BSQ5 444 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 HAUS8Q9BT25 410 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 WRAP53Q9BUR4 548 aaKnown RBP8.05□□□□□ -1.12
VAMP3-201ENST00000054666 BDH2Q9BUT1 245 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 ATG10Q9H0Y0 220 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 RPF2Q9H7B2 306 aaKnown RBP8.05□□□□□ -1.12
VAMP3-201ENST00000054666 DYRK4Q9NR20 520 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 PNPLA3Q9NST1 481 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 VAPAQ9P0L0 249 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 MBD1Q9UIS9 605 aaPredicted RBP8.05□□□□□ -1.12
VAMP3-201ENST00000054666 OAZ3Q9UMX2 235 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 SLC27A6Q9Y2P4 619 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 MYO7AQ13402 2215 aa8.05□□□□□ -1.12
VAMP3-201ENST00000054666 ZFC3H1O60293 1989 aaKnown RBP8.04□□□□□ -1.12
VAMP3-201ENST00000054666 EDDM13A0A1B0GTR0 161 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 ARHGEF33A8MVX0 844 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 DEAF1O75398 565 aaPredicted RBP8.04□□□□□ -1.12
VAMP3-201ENST00000054666 ERN1O75460 977 aaKnown RBP8.04□□□□□ -1.12
VAMP3-201ENST00000054666 PSIP1O75475 530 aaKnown RBP8.04□□□□□ -1.12
VAMP3-201ENST00000054666 PABPC4LP0CB38 370 aaKnown RBP8.04□□□□□ -1.12
VAMP3-201ENST00000054666 GGT1P19440 569 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 ITGB7P26010 798 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 RPL5P46777 297 aaKnown RBP8.04□□□□□ -1.12
VAMP3-201ENST00000054666 SH3BGRP55822 239 aaPredicted RBP8.04□□□□□ -1.12
VAMP3-201ENST00000054666 CLDN8P56748 225 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 MYBPC1Q00872 1141 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 CHRNB3Q05901 458 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 TMEM115Q12893 351 aaPredicted RBP8.04□□□□□ -1.12
VAMP3-201ENST00000054666 CSTF3Q12996 717 aaKnown RBP8.04□□□□□ -1.12
VAMP3-201ENST00000054666 GTF2H3Q13889 308 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 SELPLGQ14242 412 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 GRIN2CQ14957 1233 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 EIF4HQ15056 248 aaKnown RBP8.04□□□□□ -1.12
VAMP3-201ENST00000054666 ATP6AP1Q15904 470 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 ADRM1Q16186 407 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 DPY19L1Q2PZI1 675 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 ZNF648Q5T619 568 aaPredicted RBP8.04□□□□□ -1.12
VAMP3-201ENST00000054666 FOXB2Q5VYV0 432 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 IYDQ6PHW0 289 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 TECPR1Q7Z6L1 1165 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 RBM23Q86U06 439 aaKnown RBP8.04□□□□□ -1.12
VAMP3-201ENST00000054666 C12orf40Q86WS4 652 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 CARM1Q86X55 608 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 EPHX4Q8IUS5 362 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 DTWD1Q8N5C7 304 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 MFSD2AQ8NA29 543 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 PAPD5Q8NDF8 572 aaKnown RBP8.04□□□□□ -1.12
VAMP3-201ENST00000054666 FAM110BQ8TC76 370 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 BPIFB1Q8TDL5 484 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 FIG4Q92562 907 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 NCLNQ969V3 563 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 BIRC7Q96CA5 298 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 DTD2Q96FN9 168 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 MED8Q96G25 268 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 ITCHQ96J02 903 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 VPS50Q96JG6 964 aa8.04□□□□□ -1.12
VAMP3-201ENST00000054666 CCDC138Q96M89 665 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms