RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 NCAPD2Q15021 1401 aa17■□□□□ 0.31
PHGDH-221ENST00000641573 PTF1AQ7RTS3 328 aa17■□□□□ 0.31
PHGDH-221ENST00000641573 DLG5Q8TDM6 1919 aa17■□□□□ 0.31
PHGDH-221ENST00000641573 GPR162Q16538 588 aa16.99■□□□□ 0.31
PHGDH-221ENST00000641573 TSR2Q969E8 191 aaKnown RBP16.99■□□□□ 0.31
PHGDH-221ENST00000641573 ARXQ96QS3 562 aa16.99■□□□□ 0.31
PHGDH-221ENST00000641573 CDCA7Q9BWT1 371 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-221ENST00000641573 RGPD2P0DJD1 1756 aa16.99■□□□□ 0.31
PHGDH-221ENST00000641573 DCTN1Q14203 1278 aa16.98■□□□□ 0.31
PHGDH-221ENST00000641573 IFT57Q9NWB7 429 aa16.98■□□□□ 0.31
PHGDH-221ENST00000641573 CSB-PGBD3P0DP91 1061 aa16.97■□□□□ 0.31
PHGDH-221ENST00000641573 GNAI1P63096 354 aa16.97■□□□□ 0.31
PHGDH-221ENST00000641573 MARCH10Q8NA82 808 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-221ENST00000641573 NLRP2Q9NX02 1062 aa16.97■□□□□ 0.31
PHGDH-221ENST00000641573 LAS1LQ9Y4W2 734 aaKnown RBP16.97■□□□□ 0.31
PHGDH-221ENST00000641573 BCL9O00512 1426 aa16.96■□□□□ 0.31
PHGDH-221ENST00000641573 HTATSF1O43719 755 aaKnown RBP16.96■□□□□ 0.31
PHGDH-221ENST00000641573 ZNF853P0CG23 659 aa16.96■□□□□ 0.31
PHGDH-221ENST00000641573 ERICH6BQ5W0A0 696 aa16.96■□□□□ 0.31
PHGDH-221ENST00000641573 MCM10Q7L590 875 aa16.96■□□□□ 0.31
PHGDH-221ENST00000641573 RTF1Q92541 710 aaKnown RBP16.96■□□□□ 0.31
PHGDH-221ENST00000641573 SGIP1Q9BQI5 828 aa16.96■□□□□ 0.31
PHGDH-221ENST00000641573 MAP3K5Q99683 1374 aa16.95■□□□□ 0.3
PHGDH-221ENST00000641573 EXOSC9Q06265 439 aaKnown RBP16.95■□□□□ 0.3
PHGDH-221ENST00000641573 PLEKHO1Q53GL0 409 aaPredicted RBP16.95■□□□□ 0.3
PHGDH-221ENST00000641573 WDR17Q8IZU2 1322 aa16.95■□□□□ 0.3
PHGDH-221ENST00000641573 GNAT3A8MTJ3 354 aa16.94■□□□□ 0.3
PHGDH-221ENST00000641573 CT47B1P0C2W7 299 aaPredicted RBP16.94■□□□□ 0.3
PHGDH-221ENST00000641573 CFAP44Q96MT7 982 aa16.94■□□□□ 0.3
PHGDH-221ENST00000641573 FAM208AQ9UK61 1670 aaKnown RBP16.94■□□□□ 0.3
PHGDH-221ENST00000641573 WNK3Q9BYP7 1800 aa16.93■□□□□ 0.3
PHGDH-221ENST00000641573 CEP350Q5VT06 3117 aa16.93■□□□□ 0.3
PHGDH-221ENST00000641573 AMOTQ4VCS5 1084 aa16.93■□□□□ 0.3
PHGDH-221ENST00000641573 PELP1Q8IZL8 1130 aaKnown RBP16.93■□□□□ 0.3
PHGDH-221ENST00000641573 KLHL34Q8N239 644 aa16.93■□□□□ 0.3
PHGDH-221ENST00000641573 EXOC5O00471 708 aa16.92■□□□□ 0.3
PHGDH-221ENST00000641573 PLIN1O60240 522 aa16.92■□□□□ 0.3
PHGDH-221ENST00000641573 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.92■□□□□ 0.3
PHGDH-221ENST00000641573 MBIPQ9NS73 344 aa16.92■□□□□ 0.3
PHGDH-221ENST00000641573 BCAR3O75815 825 aa16.91■□□□□ 0.3
PHGDH-221ENST00000641573 RARSP54136 660 aaKnown RBP16.91■□□□□ 0.3
PHGDH-221ENST00000641573 ZNF530Q6P9A1 599 aaPredicted RBP16.91■□□□□ 0.3
PHGDH-221ENST00000641573 RAPGEF4Q8WZA2 1011 aa16.91■□□□□ 0.3
PHGDH-221ENST00000641573 CHL1O00533 1208 aa16.9■□□□□ 0.3
PHGDH-221ENST00000641573 TATP17735 454 aaPredicted RBP16.9■□□□□ 0.3
PHGDH-221ENST00000641573 POLD1P28340 1107 aa16.89■□□□□ 0.29
PHGDH-221ENST00000641573 AKAP4Q5JQC9 854 aa16.89■□□□□ 0.29
PHGDH-221ENST00000641573 IL17REQ8NFR9 667 aa16.89■□□□□ 0.29
PHGDH-221ENST00000641573 CARD10Q9BWT7 1032 aa16.89■□□□□ 0.29
PHGDH-221ENST00000641573 MEGF6O75095 1541 aa16.87■□□□□ 0.29
PHGDH-221ENST00000641573 C1orf141Q5JVX7 400 aa16.87■□□□□ 0.29
PHGDH-221ENST00000641573 PPP4R2Q9NY27 417 aa16.87■□□□□ 0.29
PHGDH-221ENST00000641573 PLEKHG2Q9H7P9 1386 aa16.87■□□□□ 0.29
PHGDH-221ENST00000641573 SPG7Q9UQ90 795 aa16.86■□□□□ 0.29
PHGDH-221ENST00000641573 TNS2Q63HR2 1409 aa16.86■□□□□ 0.29
PHGDH-221ENST00000641573 NHSQ6T4R5 1651 aa16.85■□□□□ 0.29
PHGDH-221ENST00000641573 ACSBG1Q96GR2 724 aa16.85■□□□□ 0.29
PHGDH-221ENST00000641573 BCL2L13Q9BXK5 485 aa16.85■□□□□ 0.29
PHGDH-221ENST00000641573 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.85■□□□□ 0.29
PHGDH-221ENST00000641573 TSPYL4Q9UJ04 414 aa16.85■□□□□ 0.29
PHGDH-221ENST00000641573 VAMP4O75379 141 aa16.84■□□□□ 0.29
PHGDH-221ENST00000641573 CANXP27824 592 aaKnown RBP16.84■□□□□ 0.29
PHGDH-221ENST00000641573 C20orf194Q5TEA3 1177 aa16.84■□□□□ 0.29
PHGDH-221ENST00000641573 TSPYL6Q8N831 410 aa16.84■□□□□ 0.29
PHGDH-221ENST00000641573 C8orf58Q8NAV2 365 aa16.84■□□□□ 0.29
PHGDH-221ENST00000641573 EXOC6Q8TAG9 804 aa16.84■□□□□ 0.29
PHGDH-221ENST00000641573 SLC16A10Q8TF71 515 aa16.84■□□□□ 0.29
PHGDH-221ENST00000641573 SSH1Q8WYL5 1049 aa16.84■□□□□ 0.29
PHGDH-221ENST00000641573 ZNF428Q96B54 188 aa16.84■□□□□ 0.29
PHGDH-221ENST00000641573 LGR6Q9HBX8 967 aa16.84■□□□□ 0.29
PHGDH-221ENST00000641573 SMC4Q9NTJ3 1288 aa16.84■□□□□ 0.29
PHGDH-221ENST00000641573 MIS18AQ9NYP9 233 aa16.84■□□□□ 0.29
PHGDH-221ENST00000641573 CEMIPQ8WUJ3 1361 aa16.84■□□□□ 0.29
PHGDH-221ENST00000641573 PAPPAQ13219 1627 aa16.84■□□□□ 0.29
PHGDH-221ENST00000641573 RNMTO43148 476 aaKnown RBP16.83■□□□□ 0.28
PHGDH-221ENST00000641573 TAF7Q15545 349 aaPredicted RBP16.83■□□□□ 0.28
PHGDH-221ENST00000641573 ZNF827Q17R98 1081 aa16.83■□□□□ 0.28
PHGDH-221ENST00000641573 TWISTNBQ3B726 338 aaPredicted RBP16.83■□□□□ 0.28
PHGDH-221ENST00000641573 ALDH1L2Q3SY69 923 aa16.83■□□□□ 0.28
PHGDH-221ENST00000641573 MPRIPQ6WCQ1 1025 aa16.83■□□□□ 0.28
PHGDH-221ENST00000641573 CRBNQ96SW2 442 aa16.83■□□□□ 0.28
PHGDH-221ENST00000641573 SHANK3Q9BYB0 1731 aa16.83■□□□□ 0.28
PHGDH-221ENST00000641573 BABAM1Q9NWV8 329 aa16.83■□□□□ 0.28
PHGDH-221ENST00000641573 ELL2O00472 640 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-221ENST00000641573 FRAT1Q92837 279 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-221ENST00000641573 GOLGB1Q14789 3259 aaKnown RBP16.81■□□□□ 0.28
PHGDH-221ENST00000641573 GRIN3BO60391 1043 aa16.81■□□□□ 0.28
PHGDH-221ENST00000641573 PHKG2P15735 406 aa16.8■□□□□ 0.28
PHGDH-221ENST00000641573 TEFQ10587 303 aa16.8■□□□□ 0.28
PHGDH-221ENST00000641573 PDE3AQ14432 1141 aa16.8■□□□□ 0.28
PHGDH-221ENST00000641573 IFNL2Q8IZJ0 200 aa16.8■□□□□ 0.28
PHGDH-221ENST00000641573 PKD1L3Q7Z443 1732 aa16.79■□□□□ 0.28
PHGDH-221ENST00000641573 IL2RBP14784 551 aa16.79■□□□□ 0.28
PHGDH-221ENST00000641573 KRT24Q2M2I5 525 aa16.79■□□□□ 0.28
PHGDH-221ENST00000641573 BTAF1O14981 1849 aa16.78■□□□□ 0.28
PHGDH-221ENST00000641573 ZKSCAN2Q63HK3 967 aa16.78■□□□□ 0.28
PHGDH-221ENST00000641573 MRPL50Q8N5N7 158 aaKnown RBP16.78■□□□□ 0.28
PHGDH-221ENST00000641573 NLGN2Q8NFZ4 835 aa16.78■□□□□ 0.28
PHGDH-221ENST00000641573 ZCRB1Q8TBF4 217 aaKnown RBP16.78■□□□□ 0.28
PHGDH-221ENST00000641573 CYP27B1O15528 508 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms