RNA–Protein interactions for RNA: ENST00000641012.1

MACF1-234, Transcript of microtubule-actin crosslinking factor 1, humanhuman

BASIC

Gene MACF1, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-234ENST00000641012 NBPF5PQ86XG9 351 aaPredicted RBP13.25□□□□□ -0.29
MACF1-234ENST00000641012 NBPF4Q96M43 638 aa13.25□□□□□ -0.29
MACF1-234ENST00000641012 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.25□□□□□ -0.29
MACF1-234ENST00000641012 LRP2BPQ9P2M1 347 aa13.25□□□□□ -0.29
MACF1-234ENST00000641012 IDH1O75874 414 aaKnown RBP13.25□□□□□ -0.29
MACF1-234ENST00000641012 TRIM27P14373 513 aa13.25□□□□□ -0.29
MACF1-234ENST00000641012 C20orf194Q5TEA3 1177 aa13.25□□□□□ -0.29
MACF1-234ENST00000641012 GZF1Q9H116 711 aaPredicted RBP13.25□□□□□ -0.29
MACF1-234ENST00000641012 RAI14Q9P0K7 980 aa13.25□□□□□ -0.29
MACF1-234ENST00000641012 KRT24Q2M2I5 525 aa13.24□□□□□ -0.29
MACF1-234ENST00000641012 C8orf58Q8NAV2 365 aa13.24□□□□□ -0.29
MACF1-234ENST00000641012 WWC3Q9ULE0 1092 aa13.24□□□□□ -0.29
MACF1-234ENST00000641012 IKQ13123 557 aaPredicted RBP13.24□□□□□ -0.29
MACF1-234ENST00000641012 CCDC34Q96HJ3 373 aa13.24□□□□□ -0.29
MACF1-234ENST00000641012 POLR3AO14802 1390 aaPredicted RBP13.24□□□□□ -0.29
MACF1-234ENST00000641012 PARD3Q8TEW0 1356 aa13.24□□□□□ -0.29
MACF1-234ENST00000641012 ADCY10Q96PN6 1610 aa13.24□□□□□ -0.29
MACF1-234ENST00000641012 C6orf229H3BNL8 230 aa13.23□□□□□ -0.29
MACF1-234ENST00000641012 NUTM1Q86Y26 1132 aa13.23□□□□□ -0.29
MACF1-234ENST00000641012 ROBO2Q9HCK4 1378 aa13.23□□□□□ -0.29
MACF1-234ENST00000641012 CWC25Q9NXE8 425 aaPredicted RBP13.23□□□□□ -0.29
MACF1-234ENST00000641012 NLRP1Q9C000 1473 aa13.23□□□□□ -0.29
MACF1-234ENST00000641012 PCDH11XQ9BZA7 1347 aa13.23□□□□□ -0.29
MACF1-234ENST00000641012 PCDH11YQ9BZA8 1340 aa13.23□□□□□ -0.29
MACF1-234ENST00000641012 IFIT1P09914 478 aaKnown RBP13.23□□□□□ -0.29
MACF1-234ENST00000641012 TRIM29Q14134 588 aa13.23□□□□□ -0.29
MACF1-234ENST00000641012 ZNF622Q969S3 477 aaKnown RBP eCLIP13.23□□□□□ -0.29
MACF1-234ENST00000641012 ZSCAN29Q8IWY8 852 aaPredicted RBP13.23□□□□□ -0.29
MACF1-234ENST00000641012 CWC22Q9HCG8 908 aaKnown RBP13.23□□□□□ -0.29
MACF1-234ENST00000641012 LDHAL6AQ6ZMR3 332 aa13.22□□□□□ -0.29
MACF1-234ENST00000641012 PPP1R42Q7Z4L9 355 aa13.22□□□□□ -0.29
MACF1-234ENST00000641012 IPO9Q96P70 1041 aaKnown RBP13.22□□□□□ -0.29
MACF1-234ENST00000641012 CDCA7Q9BWT1 371 aaPredicted RBP13.22□□□□□ -0.29
MACF1-234ENST00000641012 TSHZ2Q9NRE2 1034 aa13.22□□□□□ -0.29
MACF1-234ENST00000641012 RIMBP3CA6NJZ7 1639 aa13.22□□□□□ -0.29
MACF1-234ENST00000641012 RIMBP3BA6NNM3 1639 aa13.22□□□□□ -0.29
MACF1-234ENST00000641012 RIMBP3Q9UFD9 1639 aa13.22□□□□□ -0.29
MACF1-234ENST00000641012 ATP2B2Q01814 1243 aa13.22□□□□□ -0.29
MACF1-234ENST00000641012 C22orf23Q9BZE7 217 aa13.22□□□□□ -0.29
MACF1-234ENST00000641012 SBNO1A3KN83 1393 aa13.22□□□□□ -0.29
MACF1-234ENST00000641012 ANKRD18BA2A2Z9 1011 aa13.22□□□□□ -0.29
MACF1-234ENST00000641012 PRIM1P49642 420 aaKnown RBP13.22□□□□□ -0.29
MACF1-234ENST00000641012 CHD1LQ86WJ1 897 aa13.22□□□□□ -0.29
MACF1-234ENST00000641012 KIF1BPQ96EK5 621 aa13.22□□□□□ -0.29
MACF1-234ENST00000641012 SETDB2Q96T68 719 aa13.22□□□□□ -0.29
MACF1-234ENST00000641012 NKTRP30414 1462 aaKnown RBP13.22□□□□□ -0.29
MACF1-234ENST00000641012 IL16Q14005 1332 aa13.22□□□□□ -0.29
MACF1-234ENST00000641012 RTCBQ9Y3I0 505 aaKnown RBP13.21□□□□□ -0.29
MACF1-234ENST00000641012 HIP1O00291 1037 aa13.21□□□□□ -0.29
MACF1-234ENST00000641012 RNMTO43148 476 aaKnown RBP13.21□□□□□ -0.29
MACF1-234ENST00000641012 CAVIN4Q5BKX8 364 aa13.21□□□□□ -0.29
MACF1-234ENST00000641012 DDX46Q7L014 1031 aaKnown RBP13.21□□□□□ -0.29
MACF1-234ENST00000641012 NIP7Q9Y221 180 aaKnown RBP eCLIP13.21□□□□□ -0.3
MACF1-234ENST00000641012 PTPRCP08575 1304 aa13.2□□□□□ -0.3
MACF1-234ENST00000641012 IL13P35225 146 aa13.2□□□□□ -0.3
MACF1-234ENST00000641012 PRDM15P57071 1507 aaPredicted RBP13.2□□□□□ -0.3
MACF1-234ENST00000641012 PTPRTO14522 1441 aa13.2□□□□□ -0.3
MACF1-234ENST00000641012 FOSBP53539 338 aa13.2□□□□□ -0.3
MACF1-234ENST00000641012 NACAP1Q9BZK3 213 aa13.2□□□□□ -0.3
MACF1-234ENST00000641012 RSPH6AQ9H0K4 717 aa13.2□□□□□ -0.3
MACF1-234ENST00000641012 PIK3R4Q99570 1358 aa13.2□□□□□ -0.3
MACF1-234ENST00000641012 SART3Q15020 963 aaKnown RBP13.2□□□□□ -0.3
MACF1-234ENST00000641012 CCDC8Q9H0W5 538 aaPredicted RBP13.2□□□□□ -0.3
MACF1-234ENST00000641012 AKAP2Q9Y2D5 859 aa13.2□□□□□ -0.3
MACF1-234ENST00000641012 PIK3C2GO75747 1445 aa13.2□□□□□ -0.3
MACF1-234ENST00000641012 MAP3K5Q99683 1374 aa13.19□□□□□ -0.3
MACF1-234ENST00000641012 SMARCA5O60264 1052 aaPredicted RBP13.19□□□□□ -0.3
MACF1-234ENST00000641012 ADGBQ8N7X0 1667 aa13.19□□□□□ -0.3
MACF1-234ENST00000641012 KDM4AO75164 1064 aa13.19□□□□□ -0.3
MACF1-234ENST00000641012 NBPF14Q5TI25 921 aa13.19□□□□□ -0.3
MACF1-234ENST00000641012 DZIP3Q86Y13 1208 aaKnown RBP13.19□□□□□ -0.3
MACF1-234ENST00000641012 ZFYVE9O95405 1425 aa13.19□□□□□ -0.3
MACF1-234ENST00000641012 SPATA31E1Q6ZUB1 1445 aa13.19□□□□□ -0.3
MACF1-234ENST00000641012 SLC3A2P08195 630 aaKnown RBP13.19□□□□□ -0.3
MACF1-234ENST00000641012 BOLA2Q9H3K6 86 aa13.19□□□□□ -0.3
MACF1-234ENST00000641012 LGR6Q9HBX8 967 aa13.19□□□□□ -0.3
MACF1-234ENST00000641012 ABCC3O15438 1527 aa13.19□□□□□ -0.3
MACF1-234ENST00000641012 VPS37CA5D8V6 355 aaPredicted RBP13.19□□□□□ -0.3
MACF1-234ENST00000641012 GNPATO15228 680 aa13.19□□□□□ -0.3
MACF1-234ENST00000641012 TSPYL6Q8N831 410 aa13.19□□□□□ -0.3
MACF1-234ENST00000641012 CDC5LQ99459 802 aaKnown RBP13.19□□□□□ -0.3
MACF1-234ENST00000641012 TCEAL9Q9UHQ7 104 aa13.18□□□□□ -0.3
MACF1-234ENST00000641012 CCNL1Q9UK58 526 aaPredicted RBP13.18□□□□□ -0.3
MACF1-234ENST00000641012 NRDCO43847 1150 aa13.18□□□□□ -0.3
MACF1-234ENST00000641012 NEK4P51957 841 aa13.17□□□□□ -0.3
MACF1-234ENST00000641012 ZSCAN25Q6NSZ9 544 aa13.17□□□□□ -0.3
MACF1-234ENST00000641012 CWC27Q6UX04 472 aaKnown RBP13.17□□□□□ -0.3
MACF1-234ENST00000641012 NLRP3Q96P20 1036 aa13.17□□□□□ -0.3
MACF1-234ENST00000641012 ARAP3Q8WWN8 1544 aa13.17□□□□□ -0.3
MACF1-234ENST00000641012 GOLGA6L6A8MZA4 724 aa13.17□□□□□ -0.3
MACF1-234ENST00000641012 CREBRFQ8IUR6 639 aa13.17□□□□□ -0.3
MACF1-234ENST00000641012 SMC3Q9UQE7 1217 aa13.17□□□□□ -0.3
MACF1-234ENST00000641012 PSMA5P28066 241 aa13.17□□□□□ -0.3
MACF1-234ENST00000641012 CSPP1Q1MSJ5 1256 aa13.17□□□□□ -0.3
MACF1-234ENST00000641012 ZNF790Q6PG37 636 aa13.17□□□□□ -0.3
MACF1-234ENST00000641012 DNTTIP2Q5QJE6 756 aaKnown RBP13.16□□□□□ -0.3
MACF1-234ENST00000641012 ATP6V1DQ9Y5K8 247 aa13.16□□□□□ -0.3
MACF1-234ENST00000641012 TDO2P48775 406 aa13.16□□□□□ -0.3
MACF1-234ENST00000641012 DRC7Q8IY82 874 aa13.16□□□□□ -0.3
MACF1-234ENST00000641012 TMOD2Q9NZR1 351 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms