RNA–Protein interactions for RNA: ENST00000640251.1

PAX6-267, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-267	ENST00000640251	PHTF2	Q8N3S3	785 aa		11.07	□□□□□ -0.64
PAX6-267	ENST00000640251	ESF1	Q9H501	851 aa	Known RBP	11.07	□□□□□ -0.64
PAX6-267	ENST00000640251	ALG2	Q9H553	416 aa		11.07	□□□□□ -0.64
PAX6-267	ENST00000640251	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.07	□□□□□ -0.64
PAX6-267	ENST00000640251	PRX	Q9BXM0	1461 aa		11.06	□□□□□ -0.64
PAX6-267	ENST00000640251	CC2D2B	Q6DHV5	1058 aa		11.06	□□□□□ -0.64
PAX6-267	ENST00000640251	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.06	□□□□□ -0.64
PAX6-267	ENST00000640251	COL17A1	Q9UMD9	1497 aa	Predicted RBP	11.06	□□□□□ -0.64
PAX6-267	ENST00000640251		A6NJR5	290 aa		11.05	□□□□□ -0.64
PAX6-267	ENST00000640251	SOBP	A7XYQ1	873 aa		11.05	□□□□□ -0.64
PAX6-267	ENST00000640251	ADH1A	P07327	375 aa		11.05	□□□□□ -0.64
PAX6-267	ENST00000640251	ERVK-9	P63128	1117 aa		11.05	□□□□□ -0.64
PAX6-267	ENST00000640251	HDGFL1	Q5TGJ6	251 aa		11.05	□□□□□ -0.64
PAX6-267	ENST00000640251	TRIM52	Q96A61	297 aa		11.05	□□□□□ -0.64
PAX6-267	ENST00000640251	DOLK	Q9UPQ8	538 aa		11.05	□□□□□ -0.64
PAX6-267	ENST00000640251	UHRF1BP1L	A0JNW5	1464 aa		11.05	□□□□□ -0.64
PAX6-267	ENST00000640251	PIK3CD	O00329	1044 aa		11.04	□□□□□ -0.64
PAX6-267	ENST00000640251	ADAMTS19	Q8TE59	1207 aa		11.04	□□□□□ -0.64
PAX6-267	ENST00000640251	EPRS	P07814	1512 aa	Known RBP	11.04	□□□□□ -0.64
PAX6-267	ENST00000640251	KDM5B	Q9UGL1	1544 aa		11.04	□□□□□ -0.64
PAX6-267	ENST00000640251	OXLD1	Q5BKU9	147 aa		11.03	□□□□□ -0.64
PAX6-267	ENST00000640251	ATP5J2-PTCD1	G3V325	749 aa		11.02	□□□□□ -0.65
PAX6-267	ENST00000640251	PTGIR	P43119	386 aa		11.02	□□□□□ -0.65
PAX6-267	ENST00000640251	KDF1	Q8NAX2	398 aa	Predicted RBP	11.02	□□□□□ -0.65
PAX6-267	ENST00000640251	INSM2	Q96T92	566 aa	Predicted RBP	11.02	□□□□□ -0.65
PAX6-267	ENST00000640251	SPINT1	O43278	529 aa		11.01	□□□□□ -0.65
PAX6-267	ENST00000640251	MYC	P01106	439 aa	Predicted RBP	11.01	□□□□□ -0.65
PAX6-267	ENST00000640251	PLPP7	Q8NBV4	271 aa		11.01	□□□□□ -0.65
PAX6-267	ENST00000640251	ABCA8	O94911	1581 aa		11.01	□□□□□ -0.65
PAX6-267	ENST00000640251	GLI2	P10070	1586 aa		11	□□□□□ -0.65
PAX6-267	ENST00000640251	MAP3K4	Q9Y6R4	1608 aa		11	□□□□□ -0.65
PAX6-267	ENST00000640251	FIGNL2	A6NMB9	653 aa		11	□□□□□ -0.65
PAX6-267	ENST00000640251	MAN1A2	O60476	641 aa		11	□□□□□ -0.65
PAX6-267	ENST00000640251	SKI	P12755	728 aa		11	□□□□□ -0.65
PAX6-267	ENST00000640251	OSBPL3	Q9H4L5	887 aa		11	□□□□□ -0.65
PAX6-267	ENST00000640251	POLM	Q9NP87	494 aa	Predicted RBP	11	□□□□□ -0.65
PAX6-267	ENST00000640251	SOS2	Q07890	1332 aa	Predicted RBP	11	□□□□□ -0.65
PAX6-267	ENST00000640251	TTLL8	A6PVC2	850 aa		10.99	□□□□□ -0.65
PAX6-267	ENST00000640251	CTSO	P43234	321 aa	Predicted RBP	10.99	□□□□□ -0.65
PAX6-267	ENST00000640251	USP4	Q13107	963 aa		10.98	□□□□□ -0.65
PAX6-267	ENST00000640251	CYP2U1	Q7Z449	544 aa		10.98	□□□□□ -0.65
PAX6-267	ENST00000640251	GLMN	Q92990	594 aa		10.98	□□□□□ -0.65
PAX6-267	ENST00000640251	ZNF775	Q96BV0	537 aa	Predicted RBP	10.98	□□□□□ -0.65
PAX6-267	ENST00000640251	CHIC2	Q9UKJ5	165 aa		10.98	□□□□□ -0.65
PAX6-267	ENST00000640251	MEN1	O00255	615 aa		10.97	□□□□□ -0.65
PAX6-267	ENST00000640251	TRAK2	O60296	914 aa		10.97	□□□□□ -0.65
PAX6-267	ENST00000640251	MAP7D1	Q3KQU3	841 aa		10.97	□□□□□ -0.65
PAX6-267	ENST00000640251	DNMT3L	Q9UJW3	386 aa		10.97	□□□□□ -0.65
PAX6-267	ENST00000640251	ZNF777	Q9ULD5	760 aa	Predicted RBP	10.97	□□□□□ -0.65
PAX6-267	ENST00000640251	WDR7	Q9Y4E6	1490 aa		10.97	□□□□□ -0.65
PAX6-267	ENST00000640251		A0A1W2PRU2	124 aa		10.96	□□□□□ -0.65
PAX6-267	ENST00000640251	RAB6B	Q9NRW1	208 aa		10.96	□□□□□ -0.65
PAX6-267	ENST00000640251	FHOD3	Q2V2M9	1422 aa		10.95	□□□□□ -0.66
PAX6-267	ENST00000640251	DEPDC4	Q8N2C3	294 aa		10.95	□□□□□ -0.66
PAX6-267	ENST00000640251	CALR3	Q96L12	384 aa	Known RBP	10.95	□□□□□ -0.66
PAX6-267	ENST00000640251	ARHGEF10L	Q9HCE6	1279 aa		10.95	□□□□□ -0.66
PAX6-267	ENST00000640251	ATP10B	O94823	1461 aa		10.94	□□□□□ -0.66
PAX6-267	ENST00000640251	GOLGA3	Q08378	1498 aa		10.94	□□□□□ -0.66
PAX6-267	ENST00000640251	TBC1D9	Q6ZT07	1266 aa		10.94	□□□□□ -0.66
PAX6-267	ENST00000640251	UCN2	Q96RP3	112 aa		10.94	□□□□□ -0.66
PAX6-267	ENST00000640251	ZMYND15	Q9H091	742 aa		10.94	□□□□□ -0.66
PAX6-267	ENST00000640251	SAMD9	Q5K651	1589 aa		10.94	□□□□□ -0.66
PAX6-267	ENST00000640251	STAU1	O95793	577 aa	Known RBP	10.93	□□□□□ -0.66
PAX6-267	ENST00000640251	SIRT1	Q96EB6	747 aa		10.93	□□□□□ -0.66
PAX6-267	ENST00000640251	USP17L5	A8MUK1	530 aa		10.92	□□□□□ -0.66
PAX6-267	ENST00000640251	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.92	□□□□□ -0.66
PAX6-267	ENST00000640251	NFATC2IP	Q8NCF5	419 aa		10.92	□□□□□ -0.66
PAX6-267	ENST00000640251	NLRP3	Q96P20	1036 aa		10.92	□□□□□ -0.66
PAX6-267	ENST00000640251	GNRH1	P01148	92 aa		10.91	□□□□□ -0.66
PAX6-267	ENST00000640251	VEGFB	P49765	207 aa		10.91	□□□□□ -0.66
PAX6-267	ENST00000640251	NCOA4	Q13772	614 aa		10.91	□□□□□ -0.66
PAX6-267	ENST00000640251	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	10.91	□□□□□ -0.66
PAX6-267	ENST00000640251	EML3	Q32P44	896 aa		10.91	□□□□□ -0.66
PAX6-267	ENST00000640251	RNF217	Q8TC41	542 aa		10.91	□□□□□ -0.66
PAX6-267	ENST00000640251	ADGRL1	O94910	1474 aa		10.91	□□□□□ -0.66
PAX6-267	ENST00000640251	CD109	Q6YHK3	1445 aa		10.91	□□□□□ -0.66
PAX6-267	ENST00000640251	RAPGEF6	Q8TEU7	1601 aa		10.9	□□□□□ -0.66
PAX6-267	ENST00000640251	CLN3	Q13286	438 aa		10.89	□□□□□ -0.67
PAX6-267	ENST00000640251	PRICKLE2	Q7Z3G6	844 aa		10.89	□□□□□ -0.67
PAX6-267	ENST00000640251	TFIP11	Q9UBB9	837 aa	Known RBP	10.89	□□□□□ -0.67
PAX6-267	ENST00000640251	NOD1	Q9Y239	953 aa		10.89	□□□□□ -0.67
PAX6-267	ENST00000640251	CFAP43	Q8NDM7	1665 aa		10.89	□□□□□ -0.67
PAX6-267	ENST00000640251	NUP153	P49790	1475 aa	Known RBP	10.88	□□□□□ -0.67
PAX6-267	ENST00000640251	ATP9B	O43861	1147 aa		10.88	□□□□□ -0.67
PAX6-267	ENST00000640251	IL2RA	P01589	272 aa		10.88	□□□□□ -0.67
PAX6-267	ENST00000640251	RNF144A	P50876	292 aa	Predicted RBP	10.88	□□□□□ -0.67
PAX6-267	ENST00000640251	SLC27A3	Q5K4L6	730 aa		10.88	□□□□□ -0.67
PAX6-267	ENST00000640251	CNKSR1	Q969H4	720 aa		10.88	□□□□□ -0.67
PAX6-267	ENST00000640251	NXF1	Q9UBU9	619 aa	Known RBP	10.88	□□□□□ -0.67
PAX6-267	ENST00000640251	USP17L3	A6NCW0	530 aa		10.87	□□□□□ -0.67
PAX6-267	ENST00000640251	USP17L4	A6NCW7	530 aa		10.87	□□□□□ -0.67
PAX6-267	ENST00000640251	TERT	O14746	1132 aa	Known RBP	10.87	□□□□□ -0.67
PAX6-267	ENST00000640251	USP17L2	Q6R6M4	530 aa		10.87	□□□□□ -0.67
PAX6-267	ENST00000640251	USP17L1	Q7RTZ2	530 aa		10.87	□□□□□ -0.67
PAX6-267	ENST00000640251	LYSMD3	Q7Z3D4	306 aa		10.87	□□□□□ -0.67
PAX6-267	ENST00000640251	C14orf37	Q86TY3	774 aa		10.87	□□□□□ -0.67
PAX6-267	ENST00000640251	ETNK1	Q9HBU6	452 aa		10.87	□□□□□ -0.67
PAX6-267	ENST00000640251	TEX14	Q8IWB6	1497 aa		10.87	□□□□□ -0.67
PAX6-267	ENST00000640251	LZTS3	O60299	673 aa	Predicted RBP	10.86	□□□□□ -0.67
PAX6-267	ENST00000640251	PTS	Q03393	145 aa		10.86	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms