RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 PSME1Q06323 249 aa15.25■□□□□ 0.03
SPIN3-236ENST00000640131 ORAI2Q96SN7 254 aa15.25■□□□□ 0.03
SPIN3-236ENST00000640131 FMN2Q9NZ56 1722 aa15.25■□□□□ 0.03
SPIN3-236ENST00000640131 C16orf71Q8IYS4 520 aaPredicted RBP15.25■□□□□ 0.03
SPIN3-236ENST00000640131 RGS22Q8NE09 1264 aa15.25■□□□□ 0.03
SPIN3-236ENST00000640131 API5Q9BZZ5 524 aaKnown RBP15.25■□□□□ 0.03
SPIN3-236ENST00000640131 NALCNQ8IZF0 1738 aa15.25■□□□□ 0.03
SPIN3-236ENST00000640131 SMARCA5O60264 1052 aaPredicted RBP15.24■□□□□ 0.03
SPIN3-236ENST00000640131 LRRC59Q96AG4 307 aaKnown RBP15.24■□□□□ 0.03
SPIN3-236ENST00000640131 TBC1D32Q96NH3 1257 aa15.24■□□□□ 0.03
SPIN3-236ENST00000640131 MEIS3Q99687 375 aa15.24■□□□□ 0.03
SPIN3-236ENST00000640131 UQCRHLA0A096LP55 91 aa15.23■□□□□ 0.03
SPIN3-236ENST00000640131 UQCRHP07919 91 aa15.23■□□□□ 0.03
SPIN3-236ENST00000640131 ZNF428Q96B54 188 aa15.23■□□□□ 0.03
SPIN3-236ENST00000640131 MSH6P52701 1360 aa15.23■□□□□ 0.03
SPIN3-236ENST00000640131 C22orf23Q9BZE7 217 aa15.23■□□□□ 0.03
SPIN3-236ENST00000640131 PIK3R4Q99570 1358 aa15.23■□□□□ 0.03
SPIN3-236ENST00000640131 MAPK8IP2Q13387 824 aaPredicted RBP15.23■□□□□ 0.03
SPIN3-236ENST00000640131 OTUD7AQ8TE49 926 aaPredicted RBP15.23■□□□□ 0.03
SPIN3-236ENST00000640131 TAF3Q5VWG9 929 aa15.22■□□□□ 0.03
SPIN3-236ENST00000640131 ARHGAP45Q92619 1136 aa15.22■□□□□ 0.03
SPIN3-236ENST00000640131 TBC1D2Q9BYX2 928 aa15.22■□□□□ 0.03
SPIN3-236ENST00000640131 XRN1Q8IZH2 1706 aaKnown RBP15.22■□□□□ 0.03
SPIN3-236ENST00000640131 CRB1P82279 1406 aa15.21■□□□□ 0.03
SPIN3-236ENST00000640131 IGSF1Q8N6C5 1336 aa15.21■□□□□ 0.03
SPIN3-236ENST00000640131 RNF216Q9NWF9 866 aaPredicted RBP15.21■□□□□ 0.03
SPIN3-236ENST00000640131 ARHGEF10O15013 1369 aa15.21■□□□□ 0.03
SPIN3-236ENST00000640131 BRPF1P55201 1214 aaPredicted RBP15.21■□□□□ 0.03
SPIN3-236ENST00000640131 DDX17Q92841 729 aaKnown RBP15.2■□□□□ 0.02
SPIN3-236ENST00000640131 RGPD1P0DJD0 1748 aa15.2■□□□□ 0.02
SPIN3-236ENST00000640131 BECN1Q14457 450 aa15.2■□□□□ 0.02
SPIN3-236ENST00000640131 IL17REQ8NFR9 667 aa15.2■□□□□ 0.02
SPIN3-236ENST00000640131 DYNC1I1O14576 645 aa15.19■□□□□ 0.02
SPIN3-236ENST00000640131 EIF2S2P20042 333 aaKnown RBP15.19■□□□□ 0.02
SPIN3-236ENST00000640131 NBPF6Q5VWK0 638 aa15.19■□□□□ 0.02
SPIN3-236ENST00000640131 NBPF4Q96M43 638 aa15.19■□□□□ 0.02
SPIN3-236ENST00000640131 GNAT3A8MTJ3 354 aa15.19■□□□□ 0.02
SPIN3-236ENST00000640131 ZSCAN30Q86W11 494 aa15.19■□□□□ 0.02
SPIN3-236ENST00000640131 GAS2L2Q8NHY3 880 aa15.19■□□□□ 0.02
SPIN3-236ENST00000640131 CGNQ9P2M7 1197 aaKnown RBP15.19■□□□□ 0.02
SPIN3-236ENST00000640131 FKBP5Q13451 457 aaPredicted RBP15.18■□□□□ 0.02
SPIN3-236ENST00000640131 FOXD4L1Q9NU39 408 aa15.18■□□□□ 0.02
SPIN3-236ENST00000640131 RGS12O14924 1447 aa15.18■□□□□ 0.02
SPIN3-236ENST00000640131 MSNP26038 577 aaKnown RBP15.18■□□□□ 0.02
SPIN3-236ENST00000640131 ANXA1P04083 346 aa15.17■□□□□ 0.02
SPIN3-236ENST00000640131 TSHZ3Q63HK5 1081 aa15.17■□□□□ 0.02
SPIN3-236ENST00000640131 LGR6Q9HBX8 967 aa15.17■□□□□ 0.02
SPIN3-236ENST00000640131 BCCIPQ9P287 314 aaKnown RBP eCLIP15.17■□□□□ 0.02
SPIN3-236ENST00000640131 GCC1Q96CN9 775 aa15.17■□□□□ 0.02
SPIN3-236ENST00000640131 TRAK2O60296 914 aa15.16■□□□□ 0.02
SPIN3-236ENST00000640131 MCM4P33991 863 aa15.16■□□□□ 0.02
SPIN3-236ENST00000640131 STK31Q9BXU1 1019 aa15.16■□□□□ 0.02
SPIN3-236ENST00000640131 ISY1Q9ULR0 285 aaKnown RBP15.16■□□□□ 0.02
SPIN3-236ENST00000640131 KCNQ3O43525 872 aa15.16■□□□□ 0.02
SPIN3-236ENST00000640131 CEP85Q6P2H3 762 aa15.16■□□□□ 0.02
SPIN3-236ENST00000640131 MARF1Q9Y4F3 1742 aaKnown RBP15.16■□□□□ 0.02
SPIN3-236ENST00000640131 KDRP35968 1356 aa15.15■□□□□ 0.02
SPIN3-236ENST00000640131 CBX1P83916 185 aa15.15■□□□□ 0.02
SPIN3-236ENST00000640131 INTS3Q68E01 1043 aaKnown RBP15.15■□□□□ 0.02
SPIN3-236ENST00000640131 MPRIPQ6WCQ1 1025 aa15.15■□□□□ 0.02
SPIN3-236ENST00000640131 LTN1O94822 1766 aa15.15■□□□□ 0.02
SPIN3-236ENST00000640131 TBC1D9Q6ZT07 1266 aa15.15■□□□□ 0.02
SPIN3-236ENST00000640131 RBM42Q9BTD8 480 aaKnown RBP15.15■□□□□ 0.02
SPIN3-236ENST00000640131 EXOC6BQ9Y2D4 811 aa15.15■□□□□ 0.02
SPIN3-236ENST00000640131 RGPD2P0DJD1 1756 aa15.15■□□□□ 0.02
SPIN3-236ENST00000640131 GSPT1P15170 499 aaKnown RBP15.14■□□□□ 0.01
SPIN3-236ENST00000640131 ZC3H6P61129 1189 aaKnown RBP15.14■□□□□ 0.01
SPIN3-236ENST00000640131 PROSER2Q86WR7 435 aaPredicted RBP15.14■□□□□ 0.01
SPIN3-236ENST00000640131 CERS3Q8IU89 383 aa15.14■□□□□ 0.01
SPIN3-236ENST00000640131 PHAXQ9H814 394 aaKnown RBP15.14■□□□□ 0.01
SPIN3-236ENST00000640131 ANTXR1Q9H6X2 564 aa15.14■□□□□ 0.01
SPIN3-236ENST00000640131 CHD2O14647 1828 aaKnown RBP15.14■□□□□ 0.01
SPIN3-236ENST00000640131 RTL1A6NKG5 1358 aa15.13■□□□□ 0.01
SPIN3-236ENST00000640131 ANKARQ7Z5J8 1434 aa15.13■□□□□ 0.01
SPIN3-236ENST00000640131 FLIIQ13045 1269 aa15.13■□□□□ 0.01
SPIN3-236ENST00000640131 KIAA0232Q92628 1395 aa15.13■□□□□ 0.01
SPIN3-236ENST00000640131 MAP3K5Q99683 1374 aa15.13■□□□□ 0.01
SPIN3-236ENST00000640131 PLEKHM2Q8IWE5 1019 aa15.12■□□□□ 0.01
SPIN3-236ENST00000640131 ANKRD44Q8N8A2 993 aa15.12■□□□□ 0.01
SPIN3-236ENST00000640131 ATP10DQ9P241 1426 aa15.12■□□□□ 0.01
SPIN3-236ENST00000640131 BMP2KLQ5H9B9 411 aa15.12■□□□□ 0.01
SPIN3-236ENST00000640131 HDGFL1Q5TGJ6 251 aa15.11■□□□□ 0.01
SPIN3-236ENST00000640131 CNPY4Q8N129 248 aa15.11■□□□□ 0.01
SPIN3-236ENST00000640131 DCTPP1Q9H773 170 aa15.11■□□□□ 0.01
SPIN3-236ENST00000640131 KCNG1Q9UIX4 513 aa15.11■□□□□ 0.01
SPIN3-236ENST00000640131 NWD1Q149M9 1564 aa15.11■□□□□ 0.01
SPIN3-236ENST00000640131 ZNF530Q6P9A1 599 aaPredicted RBP15.11■□□□□ 0.01
SPIN3-236ENST00000640131 IP6K1Q92551 441 aa15.11■□□□□ 0.01
SPIN3-236ENST00000640131 PTPRCP08575 1304 aa15.1■□□□□ 0.01
SPIN3-236ENST00000640131 GCP02774 474 aa15.1■□□□□ 0.01
SPIN3-236ENST00000640131 IRX5P78411 483 aaPredicted RBP15.1■□□□□ 0.01
SPIN3-236ENST00000640131 TAF7Q15545 349 aaPredicted RBP15.1■□□□□ 0.01
SPIN3-236ENST00000640131 CABLES1Q8TDN4 633 aa15.1■□□□□ 0.01
SPIN3-236ENST00000640131 AXIN2Q9Y2T1 843 aa15.1■□□□□ 0.01
SPIN3-236ENST00000640131 HOMEZQ8IX15 550 aa15.1■□□□□ 0.01
SPIN3-236ENST00000640131 CD2BP2O95400 341 aaKnown RBP15.1■□□□□ 0.01
SPIN3-236ENST00000640131 CCDC173Q0VFZ6 552 aa15.09■□□□□ 0.01
SPIN3-236ENST00000640131 CCDC30Q5VVM6 783 aa15.09■□□□□ 0.01
SPIN3-236ENST00000640131 NPHP4O75161 1426 aaPredicted RBP15.09■□□□□ 0.01
SPIN3-236ENST00000640131 PNMA6EA0A0J9YXQ4 647 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms