RNA–Protein interactions for RNA: ENST00000639955.1

NECAP1-221, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NECAP1, Length 3,479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-221ENST00000639955 MX1P20591 662 aa9.38□□□□□ -0.91
NECAP1-221ENST00000639955 SKOR2Q2VWA4 1001 aaPredicted RBP9.38□□□□□ -0.91
NECAP1-221ENST00000639955 RTL1A6NKG5 1358 aa9.38□□□□□ -0.91
NECAP1-221ENST00000639955 SRGAP3O43295 1099 aa9.38□□□□□ -0.91
NECAP1-221ENST00000639955 RPAP2Q8IXW5 612 aaPredicted RBP9.38□□□□□ -0.91
NECAP1-221ENST00000639955 ARHGAP45Q92619 1136 aa9.38□□□□□ -0.91
NECAP1-221ENST00000639955 IL25Q9H293 177 aa9.38□□□□□ -0.91
NECAP1-221ENST00000639955 CPS1P31327 1500 aa9.38□□□□□ -0.91
NECAP1-221ENST00000639955 FAM177BA6PVY3 158 aa9.37□□□□□ -0.91
NECAP1-221ENST00000639955 LTKP29376 864 aa9.37□□□□□ -0.91
NECAP1-221ENST00000639955 NUCB2P80303 420 aa9.37□□□□□ -0.91
NECAP1-221ENST00000639955 KCNQ3O43525 872 aa9.37□□□□□ -0.91
NECAP1-221ENST00000639955 CLCN1P35523 988 aa9.37□□□□□ -0.91
NECAP1-221ENST00000639955 FERMT3Q86UX7 667 aa9.37□□□□□ -0.91
NECAP1-221ENST00000639955 C17orf53Q8N3J3 647 aaPredicted RBP9.37□□□□□ -0.91
NECAP1-221ENST00000639955 GPT2Q8TD30 523 aa9.37□□□□□ -0.91
NECAP1-221ENST00000639955 TMEM63CQ9P1W3 806 aa9.37□□□□□ -0.91
NECAP1-221ENST00000639955 CIZ1Q9ULV3 898 aaPredicted RBP9.37□□□□□ -0.91
NECAP1-221ENST00000639955 MYO3AQ8NEV4 1616 aa9.37□□□□□ -0.91
NECAP1-221ENST00000639955 VPS37CA5D8V6 355 aaPredicted RBP9.37□□□□□ -0.91
NECAP1-221ENST00000639955 MCCP23508 829 aa9.37□□□□□ -0.91
NECAP1-221ENST00000639955 MPRIPQ6WCQ1 1025 aa9.37□□□□□ -0.91
NECAP1-221ENST00000639955 AMOTL2Q9Y2J4 779 aa9.37□□□□□ -0.91
NECAP1-221ENST00000639955 ARAP3Q8WWN8 1544 aa9.37□□□□□ -0.91
NECAP1-221ENST00000639955 CHL1O00533 1208 aa9.36□□□□□ -0.91
NECAP1-221ENST00000639955 GADD45BO75293 160 aaPredicted RBP9.36□□□□□ -0.91
NECAP1-221ENST00000639955 LRRC59Q96AG4 307 aaKnown RBP9.36□□□□□ -0.91
NECAP1-221ENST00000639955 PA2G4Q9UQ80 394 aaKnown RBP9.36□□□□□ -0.91
NECAP1-221ENST00000639955 ZFYVE9O95405 1425 aa9.36□□□□□ -0.91
NECAP1-221ENST00000639955 ALKQ9UM73 1620 aa9.36□□□□□ -0.91
NECAP1-221ENST00000639955 KLHL40Q2TBA0 621 aa9.36□□□□□ -0.91
NECAP1-221ENST00000639955 PNPLA6Q8IY17 1366 aa9.36□□□□□ -0.91
NECAP1-221ENST00000639955 ADGRB2O60241 1585 aa9.36□□□□□ -0.91
NECAP1-221ENST00000639955 PUS7Q96PZ0 661 aaKnown RBP9.36□□□□□ -0.91
NECAP1-221ENST00000639955 ROBO2Q9HCK4 1378 aa9.36□□□□□ -0.91
NECAP1-221ENST00000639955 LMBRD1Q9NUN5 540 aa9.36□□□□□ -0.91
NECAP1-221ENST00000639955 TAF7Q15545 349 aaPredicted RBP9.35□□□□□ -0.91
NECAP1-221ENST00000639955 PPP1R42Q7Z4L9 355 aa9.35□□□□□ -0.91
NECAP1-221ENST00000639955 TSC1Q92574 1164 aa9.35□□□□□ -0.91
NECAP1-221ENST00000639955 STK3Q13188 491 aa9.35□□□□□ -0.91
NECAP1-221ENST00000639955 ZDHHC9Q9Y397 364 aa9.35□□□□□ -0.91
NECAP1-221ENST00000639955 ARHGEF40Q8TER5 1519 aa9.35□□□□□ -0.91
NECAP1-221ENST00000639955 VGLL3A8MV65 326 aa9.35□□□□□ -0.91
NECAP1-221ENST00000639955 NBPF7P0C2Y1 421 aaPredicted RBP9.35□□□□□ -0.91
NECAP1-221ENST00000639955 FAM173BQ6P4H8 233 aa9.35□□□□□ -0.91
NECAP1-221ENST00000639955 FBXW7Q969H0 707 aa9.35□□□□□ -0.91
NECAP1-221ENST00000639955 ZNF330Q9Y3S2 320 aaPredicted RBP9.35□□□□□ -0.91
NECAP1-221ENST00000639955 NDUFB9Q9Y6M9 179 aa9.35□□□□□ -0.91
NECAP1-221ENST00000639955 DIP2CQ9Y2E4 1556 aa9.34□□□□□ -0.91
NECAP1-221ENST00000639955 EDC4Q6P2E9 1401 aaKnown RBP9.34□□□□□ -0.91
NECAP1-221ENST00000639955 PI4KAP2A4QPH2 592 aa9.34□□□□□ -0.91
NECAP1-221ENST00000639955 DDIT3P35638 169 aa9.34□□□□□ -0.91
NECAP1-221ENST00000639955 PI4KAP1Q8N8J0 262 aa9.34□□□□□ -0.91
NECAP1-221ENST00000639955 ESYT1Q9BSJ8 1104 aa9.34□□□□□ -0.91
NECAP1-221ENST00000639955 LGR6Q9HBX8 967 aa9.34□□□□□ -0.91
NECAP1-221ENST00000639955 CHPF2Q9P2E5 772 aa9.34□□□□□ -0.91
NECAP1-221ENST00000639955 PTCH1Q13635 1447 aa9.34□□□□□ -0.91
NECAP1-221ENST00000639955 TEFQ10587 303 aa9.34□□□□□ -0.91
NECAP1-221ENST00000639955 NECAB1Q8N987 351 aa9.34□□□□□ -0.91
NECAP1-221ENST00000639955 KLHDC4Q8TBB5 520 aa9.34□□□□□ -0.91
NECAP1-221ENST00000639955 C9orf78Q9NZ63 289 aaPredicted RBP9.34□□□□□ -0.91
NECAP1-221ENST00000639955 LMTK2Q8IWU2 1503 aa9.34□□□□□ -0.91
NECAP1-221ENST00000639955 PRAMEF22A3QJZ6 481 aa9.33□□□□□ -0.92
NECAP1-221ENST00000639955 CCDC173Q0VFZ6 552 aa9.33□□□□□ -0.92
NECAP1-221ENST00000639955 CCDC30Q5VVM6 783 aa9.33□□□□□ -0.92
NECAP1-221ENST00000639955 CCDC83Q8IWF9 413 aa9.33□□□□□ -0.92
NECAP1-221ENST00000639955 SPC24Q8NBT2 197 aa9.33□□□□□ -0.92
NECAP1-221ENST00000639955 USP25Q9UHP3 1055 aa9.33□□□□□ -0.92
NECAP1-221ENST00000639955 CNPY2Q9Y2B0 182 aa9.33□□□□□ -0.92
NECAP1-221ENST00000639955 CCT4P50991 539 aaKnown RBP9.33□□□□□ -0.92
NECAP1-221ENST00000639955 HAP1P54257 671 aaPredicted RBP9.33□□□□□ -0.92
NECAP1-221ENST00000639955 EID1Q9Y6B2 187 aa9.33□□□□□ -0.92
NECAP1-221ENST00000639955 GNAT3A8MTJ3 354 aa9.33□□□□□ -0.92
NECAP1-221ENST00000639955 MYL6BP14649 208 aa9.33□□□□□ -0.92
NECAP1-221ENST00000639955 HDGFP51858 240 aaKnown RBP9.33□□□□□ -0.92
NECAP1-221ENST00000639955 CWF19L2Q2TBE0 894 aaKnown RBP9.33□□□□□ -0.92
NECAP1-221ENST00000639955 CCDC8Q9H0W5 538 aaPredicted RBP9.33□□□□□ -0.92
NECAP1-221ENST00000639955 PRDM10Q9NQV6 1147 aa9.33□□□□□ -0.92
NECAP1-221ENST00000639955 DIAPH3Q9NSV4 1193 aa9.33□□□□□ -0.92
NECAP1-221ENST00000639955 ATP10DQ9P241 1426 aa9.32□□□□□ -0.92
NECAP1-221ENST00000639955 ZSCAN30Q86W11 494 aa9.32□□□□□ -0.92
NECAP1-221ENST00000639955 IL17REQ8NFR9 667 aa9.32□□□□□ -0.92
NECAP1-221ENST00000639955 CASTP20810 708 aaKnown RBP9.32□□□□□ -0.92
NECAP1-221ENST00000639955 CHMLP26374 656 aa9.32□□□□□ -0.92
NECAP1-221ENST00000639955 CEBPZQ03701 1054 aaKnown RBP9.32□□□□□ -0.92
NECAP1-221ENST00000639955 PRPF40BQ6NWY9 871 aaKnown RBP9.32□□□□□ -0.92
NECAP1-221ENST00000639955 CFAP74Q9C0B2 1584 aa9.32□□□□□ -0.92
NECAP1-221ENST00000639955 GNAI3P08754 354 aa9.32□□□□□ -0.92
NECAP1-221ENST00000639955 HCLS1P14317 486 aaPredicted RBP9.32□□□□□ -0.92
NECAP1-221ENST00000639955 ZMYM3Q14202 1370 aa9.32□□□□□ -0.92
NECAP1-221ENST00000639955 KDM4AO75164 1064 aa9.31□□□□□ -0.92
NECAP1-221ENST00000639955 CAMK4Q16566 473 aa9.31□□□□□ -0.92
NECAP1-221ENST00000639955 ESCO1Q5FWF5 840 aa9.31□□□□□ -0.92
NECAP1-221ENST00000639955 SRCIN1Q9C0H9 1055 aa9.31□□□□□ -0.92
NECAP1-221ENST00000639955 JAKMIP1Q96N16 626 aaKnown RBP9.31□□□□□ -0.92
NECAP1-221ENST00000639955 PTPRCP08575 1304 aa9.31□□□□□ -0.92
NECAP1-221ENST00000639955 A2ML1A8K2U0 1454 aa9.31□□□□□ -0.92
NECAP1-221ENST00000639955 ZNF530Q6P9A1 599 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-221ENST00000639955 GIMAP6Q6P9H5 292 aa9.3□□□□□ -0.92
NECAP1-221ENST00000639955 RASEFQ8IZ41 740 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms