RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	NEMF	O60524	1076 aa		13.35	□□□□□ -0.27
SPIN3-231	ENST00000639895	TERF2IP	Q9NYB0	399 aa		13.35	□□□□□ -0.27
SPIN3-231	ENST00000639895	DNAI1	Q9UI46	699 aa		13.35	□□□□□ -0.27
SPIN3-231	ENST00000639895	EIF4G3	O43432	1585 aa	Known RBP	13.35	□□□□□ -0.27
SPIN3-231	ENST00000639895	DENND4B	O75064	1496 aa	Predicted RBP	13.35	□□□□□ -0.27
SPIN3-231	ENST00000639895	CT47B1	P0C2W7	299 aa	Predicted RBP	13.35	□□□□□ -0.27
SPIN3-231	ENST00000639895	RUFY1	Q96T51	708 aa		13.35	□□□□□ -0.27
SPIN3-231	ENST00000639895	KDM5B	Q9UGL1	1544 aa		13.35	□□□□□ -0.27
SPIN3-231	ENST00000639895	SCAPER	Q9BY12	1400 aa		13.35	□□□□□ -0.27
SPIN3-231	ENST00000639895	ANO6	Q4KMQ2	910 aa		13.35	□□□□□ -0.27
SPIN3-231	ENST00000639895	PHACTR2	O75167	634 aa		13.34	□□□□□ -0.27
SPIN3-231	ENST00000639895	RAD51AP2	Q09MP3	1159 aa		13.34	□□□□□ -0.27
SPIN3-231	ENST00000639895	KIAA1524	Q8TCG1	905 aa		13.34	□□□□□ -0.27
SPIN3-231	ENST00000639895	PER1	O15534	1290 aa	Predicted RBP	13.34	□□□□□ -0.27
SPIN3-231	ENST00000639895	JAKMIP3	Q5VZ66	844 aa		13.34	□□□□□ -0.27
SPIN3-231	ENST00000639895	VPS18	Q9P253	973 aa		13.34	□□□□□ -0.27
SPIN3-231	ENST00000639895	PDC	P20941	246 aa		13.34	□□□□□ -0.27
SPIN3-231	ENST00000639895	CNPY4	Q8N129	248 aa		13.34	□□□□□ -0.27
SPIN3-231	ENST00000639895	ADGB	Q8N7X0	1667 aa		13.33	□□□□□ -0.27
SPIN3-231	ENST00000639895	MAP2K2	P36507	400 aa		13.33	□□□□□ -0.28
SPIN3-231	ENST00000639895	SYT10	Q6XYQ8	523 aa		13.33	□□□□□ -0.28
SPIN3-231	ENST00000639895	CCDC83	Q8IWF9	413 aa		13.33	□□□□□ -0.28
SPIN3-231	ENST00000639895	VGF	O15240	615 aa	Predicted RBP	13.33	□□□□□ -0.28
SPIN3-231	ENST00000639895	STX6	O43752	255 aa		13.33	□□□□□ -0.28
SPIN3-231	ENST00000639895	ERCC6L	Q2NKX8	1250 aa		13.33	□□□□□ -0.28
SPIN3-231	ENST00000639895	CEP57L1	Q8IYX8	460 aa		13.33	□□□□□ -0.28
SPIN3-231	ENST00000639895	TFIP11	Q9UBB9	837 aa	Known RBP	13.33	□□□□□ -0.28
SPIN3-231	ENST00000639895	CTNNA3	Q9UI47	895 aa		13.33	□□□□□ -0.28
SPIN3-231	ENST00000639895	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.33	□□□□□ -0.28
SPIN3-231	ENST00000639895	JRKL	Q9Y4A0	524 aa		13.33	□□□□□ -0.28
SPIN3-231	ENST00000639895	ICE2	Q659A1	982 aa		13.33	□□□□□ -0.28
SPIN3-231	ENST00000639895	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.33	□□□□□ -0.28
SPIN3-231	ENST00000639895	TESK2	Q96S53	571 aa		13.33	□□□□□ -0.28
SPIN3-231	ENST00000639895	SRRT	Q9BXP5	876 aa	Known RBP	13.33	□□□□□ -0.28
SPIN3-231	ENST00000639895	SYTL4	Q96C24	671 aa	Predicted RBP	13.32	□□□□□ -0.28
SPIN3-231	ENST00000639895	PLCD4	Q9BRC7	762 aa		13.32	□□□□□ -0.28
SPIN3-231	ENST00000639895	SERPINC1	P01008	464 aa		13.32	□□□□□ -0.28
SPIN3-231	ENST00000639895	CCDC70	Q6NSX1	233 aa		13.32	□□□□□ -0.28
SPIN3-231	ENST00000639895	SYCP2	Q9BX26	1530 aa		13.32	□□□□□ -0.28
SPIN3-231	ENST00000639895	MYCN	P04198	464 aa	Predicted RBP	13.31	□□□□□ -0.28
SPIN3-231	ENST00000639895	OAS2	P29728	719 aa	Known RBP	13.31	□□□□□ -0.28
SPIN3-231	ENST00000639895	TYRO3	Q06418	890 aa		13.31	□□□□□ -0.28
SPIN3-231	ENST00000639895	CCDC69	A6NI79	296 aa		13.31	□□□□□ -0.28
SPIN3-231	ENST00000639895	STK31	Q9BXU1	1019 aa		13.31	□□□□□ -0.28
SPIN3-231	ENST00000639895	FAM107B	Q9H098	131 aa		13.31	□□□□□ -0.28
SPIN3-231	ENST00000639895	DNAJC25	Q9H1X3	360 aa		13.31	□□□□□ -0.28
SPIN3-231	ENST00000639895	MYO1C	O00159	1063 aa		13.31	□□□□□ -0.28
SPIN3-231	ENST00000639895	RGS22	Q8NE09	1264 aa		13.31	□□□□□ -0.28
SPIN3-231	ENST00000639895	NUP160	Q12769	1436 aa		13.3	□□□□□ -0.28
SPIN3-231	ENST00000639895	SART3	Q15020	963 aa	Known RBP	13.3	□□□□□ -0.28
SPIN3-231	ENST00000639895	TMEM132E	Q6IEE7	984 aa		13.3	□□□□□ -0.28
SPIN3-231	ENST00000639895	PPM1E	Q8WY54	764 aa		13.3	□□□□□ -0.28
SPIN3-231	ENST00000639895	TICAM2	Q86XR7	235 aa		13.3	□□□□□ -0.28
SPIN3-231	ENST00000639895	ZNF692	Q9BU19	519 aa	Predicted RBP	13.3	□□□□□ -0.28
SPIN3-231	ENST00000639895	LRRCC1	Q9C099	1032 aa		13.3	□□□□□ -0.28
SPIN3-231	ENST00000639895	PES1	O00541	588 aa	Known RBP	13.3	□□□□□ -0.28
SPIN3-231	ENST00000639895	RUFY2	Q8WXA3	655 aa		13.3	□□□□□ -0.28
SPIN3-231	ENST00000639895	DDX11	Q96FC9	970 aa		13.3	□□□□□ -0.28
SPIN3-231	ENST00000639895	ZSCAN22	P10073	491 aa	Predicted RBP	13.29	□□□□□ -0.28
SPIN3-231	ENST00000639895	ATP6V1A	P38606	617 aa		13.29	□□□□□ -0.28
SPIN3-231	ENST00000639895	DNM1	Q05193	864 aa	Known RBP	13.29	□□□□□ -0.28
SPIN3-231	ENST00000639895	STK3	Q13188	491 aa		13.29	□□□□□ -0.28
SPIN3-231	ENST00000639895	TMC6	Q7Z403	805 aa		13.29	□□□□□ -0.28
SPIN3-231	ENST00000639895	DDX54	Q8TDD1	881 aa	Known RBP	13.29	□□□□□ -0.28
SPIN3-231	ENST00000639895	SMARCC1	Q92922	1105 aa	Predicted RBP	13.29	□□□□□ -0.28
SPIN3-231	ENST00000639895	SCAF11	Q99590	1463 aa	Known RBP	13.29	□□□□□ -0.28
SPIN3-231	ENST00000639895	SDS	P20132	328 aa		13.29	□□□□□ -0.28
SPIN3-231	ENST00000639895	NF2	P35240	595 aa		13.29	□□□□□ -0.28
SPIN3-231	ENST00000639895	GBP6	Q6ZN66	633 aa		13.29	□□□□□ -0.28
SPIN3-231	ENST00000639895	ST7	Q9NRC1	585 aa		13.29	□□□□□ -0.28
SPIN3-231	ENST00000639895	DACT1	Q9NYF0	836 aa		13.29	□□□□□ -0.28
SPIN3-231	ENST00000639895	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.29	□□□□□ -0.28
SPIN3-231	ENST00000639895	GPRASP1	Q5JY77	1395 aa		13.29	□□□□□ -0.28
SPIN3-231	ENST00000639895	SHTN1	A0MZ66	631 aa		13.29	□□□□□ -0.28
SPIN3-231	ENST00000639895	LRRIQ1	Q96JM4	1722 aa		13.29	□□□□□ -0.28
SPIN3-231	ENST00000639895	RRP15	Q9Y3B9	282 aa	Known RBP	13.29	□□□□□ -0.28
SPIN3-231	ENST00000639895	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.29	□□□□□ -0.28
SPIN3-231	ENST00000639895	MAP4K4	O95819	1239 aa	Predicted RBP	13.28	□□□□□ -0.28
SPIN3-231	ENST00000639895	SLFN14	P0C7P3	912 aa		13.28	□□□□□ -0.28
SPIN3-231	ENST00000639895	TTC22	Q5TAA0	569 aa		13.28	□□□□□ -0.28
SPIN3-231	ENST00000639895	SLC12A5	Q9H2X9	1139 aa		13.28	□□□□□ -0.28
SPIN3-231	ENST00000639895	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.28	□□□□□ -0.28
SPIN3-231	ENST00000639895	KDM5C	P41229	1560 aa		13.28	□□□□□ -0.28
SPIN3-231	ENST00000639895	GOLIM4	O00461	696 aa		13.28	□□□□□ -0.28
SPIN3-231	ENST00000639895	FBXO38	Q6PIJ6	1188 aa		13.28	□□□□□ -0.28
SPIN3-231	ENST00000639895	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.28	□□□□□ -0.28
SPIN3-231	ENST00000639895	USP26	Q9BXU7	913 aa		13.28	□□□□□ -0.28
SPIN3-231	ENST00000639895	SOX12	O15370	315 aa		13.28	□□□□□ -0.28
SPIN3-231	ENST00000639895	ME1	P48163	572 aa		13.28	□□□□□ -0.28
SPIN3-231	ENST00000639895	GSDMD	P57764	484 aa		13.28	□□□□□ -0.28
SPIN3-231	ENST00000639895	GNG11	P61952	73 aa		13.28	□□□□□ -0.28
SPIN3-231	ENST00000639895	DIAPH1	O60610	1272 aa	Known RBP	13.28	□□□□□ -0.28
SPIN3-231	ENST00000639895	HMOX1	P09601	288 aa		13.27	□□□□□ -0.29
SPIN3-231	ENST00000639895	SARNP	P82979	210 aa	Known RBP	13.27	□□□□□ -0.29
SPIN3-231	ENST00000639895	DDX19A	Q9NUU7	478 aa	Known RBP	13.27	□□□□□ -0.29
SPIN3-231	ENST00000639895	MBD5	Q9P267	1494 aa		13.27	□□□□□ -0.29
SPIN3-231	ENST00000639895	SMC1A	Q14683	1233 aa	Known RBP	13.27	□□□□□ -0.29
SPIN3-231	ENST00000639895	CFAP100	Q494V2	611 aa		13.27	□□□□□ -0.29
SPIN3-231	ENST00000639895	GPATCH3	Q96I76	525 aa		13.27	□□□□□ -0.29
SPIN3-231	ENST00000639895	CRACR2A	Q9BSW2	395 aa		13.27	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms