RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 GNAI2P04899 355 aa6.75□□□□□ -1.33
SCARB2-218ENST00000639715 C1orf141Q5JVX7 400 aa6.75□□□□□ -1.33
SCARB2-218ENST00000639715 ANO2Q9NQ90 1003 aa6.75□□□□□ -1.33
SCARB2-218ENST00000639715 PCDHB15Q9Y5E8 787 aa6.75□□□□□ -1.33
SCARB2-218ENST00000639715 PREX2Q70Z35 1606 aa6.75□□□□□ -1.33
SCARB2-218ENST00000639715 ALKQ9UM73 1620 aa6.75□□□□□ -1.33
SCARB2-218ENST00000639715 SSFA2P28290 1259 aa6.75□□□□□ -1.33
SCARB2-218ENST00000639715 PRIM1P49642 420 aaKnown RBP6.75□□□□□ -1.33
SCARB2-218ENST00000639715 TPM4P67936 248 aa6.75□□□□□ -1.33
SCARB2-218ENST00000639715 ZSCAN23Q3MJ62 389 aa6.75□□□□□ -1.33
SCARB2-218ENST00000639715 TTC12Q9H892 705 aaPredicted RBP6.75□□□□□ -1.33
SCARB2-218ENST00000639715 RNF17Q9BXT8 1623 aaKnown RBP6.75□□□□□ -1.33
SCARB2-218ENST00000639715 CHRM1P11229 460 aaPredicted RBP6.75□□□□□ -1.33
SCARB2-218ENST00000639715 BMP2KLQ5H9B9 411 aa6.75□□□□□ -1.33
SCARB2-218ENST00000639715 CCDC91Q7Z6B0 441 aa6.75□□□□□ -1.33
SCARB2-218ENST00000639715 SPC24Q8NBT2 197 aa6.75□□□□□ -1.33
SCARB2-218ENST00000639715 CNKSR2Q8WXI2 1034 aa6.75□□□□□ -1.33
SCARB2-218ENST00000639715 RBSNQ9H1K0 784 aa6.75□□□□□ -1.33
SCARB2-218ENST00000639715 C1orf115Q9H7X2 142 aa6.75□□□□□ -1.33
SCARB2-218ENST00000639715 KCNG1Q9UIX4 513 aa6.75□□□□□ -1.33
SCARB2-218ENST00000639715 PRDM15P57071 1507 aaPredicted RBP6.74□□□□□ -1.33
SCARB2-218ENST00000639715 FYB1O15117 783 aa6.74□□□□□ -1.33
SCARB2-218ENST00000639715 MBD3O95983 291 aa6.74□□□□□ -1.33
SCARB2-218ENST00000639715 SLC4A2P04920 1241 aa6.74□□□□□ -1.33
SCARB2-218ENST00000639715 UBTFL1P0CB47 393 aaPredicted RBP6.74□□□□□ -1.33
SCARB2-218ENST00000639715 ZKSCAN1P17029 563 aaPredicted RBP6.74□□□□□ -1.33
SCARB2-218ENST00000639715 TPD52L1Q16890 204 aaPredicted RBP6.74□□□□□ -1.33
SCARB2-218ENST00000639715 HSP90AB3PQ58FF7 597 aa6.74□□□□□ -1.33
SCARB2-218ENST00000639715 LEKR1Q6ZMV7 388 aa6.74□□□□□ -1.33
SCARB2-218ENST00000639715 AK7Q96M32 723 aa6.74□□□□□ -1.33
SCARB2-218ENST00000639715 RIOK3O14730 519 aaKnown RBP6.74□□□□□ -1.33
SCARB2-218ENST00000639715 ERC2O15083 957 aa6.74□□□□□ -1.33
SCARB2-218ENST00000639715 NLRP6P59044 892 aa6.74□□□□□ -1.33
SCARB2-218ENST00000639715 EP400NLQ6ZTU2 488 aa6.74□□□□□ -1.33
SCARB2-218ENST00000639715 MNS1Q8NEH6 495 aa6.74□□□□□ -1.33
SCARB2-218ENST00000639715 CDC42BPAQ5VT25 1732 aa6.74□□□□□ -1.33
SCARB2-218ENST00000639715 WASLO00401 505 aaPredicted RBP6.74□□□□□ -1.33
SCARB2-218ENST00000639715 POLR1AO95602 1720 aaPredicted RBP6.74□□□□□ -1.33
SCARB2-218ENST00000639715 DDX58O95786 925 aaKnown RBP6.74□□□□□ -1.33
SCARB2-218ENST00000639715 NPATQ14207 1427 aa6.74□□□□□ -1.33
SCARB2-218ENST00000639715 NOL8Q76FK4 1167 aaKnown RBP6.74□□□□□ -1.33
SCARB2-218ENST00000639715 SRCIN1Q9C0H9 1055 aa6.74□□□□□ -1.33
SCARB2-218ENST00000639715 C9orf78Q9NZ63 289 aaPredicted RBP6.74□□□□□ -1.33
SCARB2-218ENST00000639715 CEP83Q9Y592 693 aa6.74□□□□□ -1.33
SCARB2-218ENST00000639715 LRRIQ1Q96JM4 1722 aa6.74□□□□□ -1.33
SCARB2-218ENST00000639715 TPM3P06753 285 aa6.73□□□□□ -1.33
SCARB2-218ENST00000639715 TRMT2AQ8IZ69 625 aaKnown RBP6.73□□□□□ -1.33
SCARB2-218ENST00000639715 C17orf53Q8N3J3 647 aaPredicted RBP6.73□□□□□ -1.33
SCARB2-218ENST00000639715 CCDC191Q8NCU4 936 aa6.73□□□□□ -1.33
SCARB2-218ENST00000639715 ARGLU1Q9NWB6 273 aaPredicted RBP6.73□□□□□ -1.33
SCARB2-218ENST00000639715 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.73□□□□□ -1.33
SCARB2-218ENST00000639715 SIGLEC1Q9BZZ2 1709 aa6.73□□□□□ -1.33
SCARB2-218ENST00000639715 NEXNQ0ZGT2 675 aa6.73□□□□□ -1.33
SCARB2-218ENST00000639715 TTC31Q49AM3 519 aaPredicted RBP6.73□□□□□ -1.33
SCARB2-218ENST00000639715 CT47A1Q5JQC4 288 aaPredicted RBP6.73□□□□□ -1.33
SCARB2-218ENST00000639715 ICE2Q659A1 982 aa6.73□□□□□ -1.33
SCARB2-218ENST00000639715 TTLL5Q6EMB2 1281 aa6.73□□□□□ -1.33
SCARB2-218ENST00000639715 NCAPGQ9BPX3 1015 aa6.73□□□□□ -1.33
SCARB2-218ENST00000639715 YY1AP1Q9H869 796 aa6.73□□□□□ -1.33
SCARB2-218ENST00000639715 DEPDC5O75140 1603 aa6.73□□□□□ -1.33
SCARB2-218ENST00000639715 CSB-PGBD3P0DP91 1061 aa6.73□□□□□ -1.33
SCARB2-218ENST00000639715 TERF2Q15554 542 aa6.73□□□□□ -1.33
SCARB2-218ENST00000639715 TXLNBQ8N3L3 684 aa6.73□□□□□ -1.33
SCARB2-218ENST00000639715 SPINK5Q9NQ38 1064 aaPredicted RBP6.73□□□□□ -1.33
SCARB2-218ENST00000639715 RBM27Q9P2N5 1060 aaKnown RBP6.73□□□□□ -1.33
SCARB2-218ENST00000639715 TRPM2O94759 1503 aa6.73□□□□□ -1.33
SCARB2-218ENST00000639715 BAG4O95429 457 aaKnown RBP6.73□□□□□ -1.33
SCARB2-218ENST00000639715 EIF2S2P20042 333 aaKnown RBP6.73□□□□□ -1.33
SCARB2-218ENST00000639715 SLC20A2Q08357 652 aa6.73□□□□□ -1.33
SCARB2-218ENST00000639715 GIMAP7Q8NHV1 300 aa6.73□□□□□ -1.33
SCARB2-218ENST00000639715 ZMYM3Q14202 1370 aa6.73□□□□□ -1.33
SCARB2-218ENST00000639715 ZNF521Q96K83 1311 aa6.72□□□□□ -1.33
SCARB2-218ENST00000639715 CROCC2H7BZ55 1655 aa6.72□□□□□ -1.33
SCARB2-218ENST00000639715 KDM5AP29375 1690 aaKnown RBP6.72□□□□□ -1.33
SCARB2-218ENST00000639715 MPHOSPH10O00566 681 aaKnown RBP6.72□□□□□ -1.33
SCARB2-218ENST00000639715 IFIT2P09913 472 aaKnown RBP6.72□□□□□ -1.33
SCARB2-218ENST00000639715 CCDC172P0C7W6 258 aa6.72□□□□□ -1.33
SCARB2-218ENST00000639715 NEK4P51957 841 aa6.72□□□□□ -1.33
SCARB2-218ENST00000639715 HNRNPH2P55795 449 aaKnown RBP6.72□□□□□ -1.33
SCARB2-218ENST00000639715 NUCB1Q02818 461 aa6.72□□□□□ -1.33
SCARB2-218ENST00000639715 WAPLQ7Z5K2 1190 aa6.72□□□□□ -1.33
SCARB2-218ENST00000639715 USP25Q9UHP3 1055 aa6.72□□□□□ -1.33
SCARB2-218ENST00000639715 PLXNC1O60486 1568 aa6.72□□□□□ -1.33
SCARB2-218ENST00000639715 A0A1B0GUL7 405 aa6.72□□□□□ -1.33
SCARB2-218ENST00000639715 H0YHG0 523 aa6.72□□□□□ -1.33
SCARB2-218ENST00000639715 SARNPP82979 210 aaKnown RBP6.72□□□□□ -1.33
SCARB2-218ENST00000639715 BMS1Q14692 1282 aaKnown RBP6.72□□□□□ -1.33
SCARB2-218ENST00000639715 RNF20Q5VTR2 975 aa6.72□□□□□ -1.33
SCARB2-218ENST00000639715 LRCH2Q5VUJ6 765 aa6.72□□□□□ -1.33
SCARB2-218ENST00000639715 SMC5Q8IY18 1101 aa6.72□□□□□ -1.33
SCARB2-218ENST00000639715 LRRCC1Q9C099 1032 aa6.72□□□□□ -1.33
SCARB2-218ENST00000639715 RBM28Q9NW13 759 aaKnown RBP6.72□□□□□ -1.33
SCARB2-218ENST00000639715 ZFYVE9O95405 1425 aa6.72□□□□□ -1.33
SCARB2-218ENST00000639715 MNAT1P51948 309 aa6.72□□□□□ -1.33
SCARB2-218ENST00000639715 RRS1Q15050 365 aaKnown RBP6.72□□□□□ -1.33
SCARB2-218ENST00000639715 SKIDA1Q1XH10 827 aa6.72□□□□□ -1.33
SCARB2-218ENST00000639715 TMED8Q6PL24 325 aaPredicted RBP6.72□□□□□ -1.33
SCARB2-218ENST00000639715 KRBA2Q6ZNG9 492 aa6.72□□□□□ -1.33
SCARB2-218ENST00000639715 ANKRD20A12PQ8NF67 263 aa6.72□□□□□ -1.33
SCARB2-218ENST00000639715 PIBF1Q8WXW3 757 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms