RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 R3HDM1Q15032 1099 aaKnown RBP17.8■□□□□ 0.44
ATRIP-208ENST00000639561 NFE2L2Q16236 605 aa17.8■□□□□ 0.44
ATRIP-208ENST00000639561 MS4A1P11836 297 aa17.79■□□□□ 0.44
ATRIP-208ENST00000639561 NEFMP07197 916 aa17.78■□□□□ 0.44
ATRIP-208ENST00000639561 FLT4P35916 1363 aa17.78■□□□□ 0.44
ATRIP-208ENST00000639561 BCL11AQ9H165 835 aa17.77■□□□□ 0.44
ATRIP-208ENST00000639561 CLUAP1Q96AJ1 413 aa17.77■□□□□ 0.44
ATRIP-208ENST00000639561 DLG5Q8TDM6 1919 aa17.77■□□□□ 0.43
ATRIP-208ENST00000639561 EIF4A2Q14240 407 aaKnown RBP17.76■□□□□ 0.43
ATRIP-208ENST00000639561 THUMPD2Q9BTF0 503 aaKnown RBP17.76■□□□□ 0.43
ATRIP-208ENST00000639561 PDE4AP27815 886 aa17.75■□□□□ 0.43
ATRIP-208ENST00000639561 SSH1Q8WYL5 1049 aa17.75■□□□□ 0.43
ATRIP-208ENST00000639561 IGHDP01880 384 aa17.75■□□□□ 0.43
ATRIP-208ENST00000639561 AEBP1Q8IUX7 1158 aa17.74■□□□□ 0.43
ATRIP-208ENST00000639561 SMC4Q9NTJ3 1288 aa17.74■□□□□ 0.43
ATRIP-208ENST00000639561 HSP90AB2PQ58FF8 381 aa17.74■□□□□ 0.43
ATRIP-208ENST00000639561 BACH2Q9BYV9 841 aa17.74■□□□□ 0.43
ATRIP-208ENST00000639561 BTAF1O14981 1849 aa17.74■□□□□ 0.43
ATRIP-208ENST00000639561 SHANK3Q9BYB0 1731 aa17.73■□□□□ 0.43
ATRIP-208ENST00000639561 ZKSCAN2Q63HK3 967 aa17.73■□□□□ 0.43
ATRIP-208ENST00000639561 PTF1AQ7RTS3 328 aa17.73■□□□□ 0.43
ATRIP-208ENST00000639561 KAT6BQ8WYB5 2073 aa17.72■□□□□ 0.43
ATRIP-208ENST00000639561 MEGF6O75095 1541 aa17.72■□□□□ 0.43
ATRIP-208ENST00000639561 SULT6B1Q6IMI4 303 aa17.71■□□□□ 0.43
ATRIP-208ENST00000639561 LAS1LQ9Y4W2 734 aaKnown RBP17.71■□□□□ 0.43
ATRIP-208ENST00000639561 TRIM27P14373 513 aa17.71■□□□□ 0.42
ATRIP-208ENST00000639561 ACSBG1Q96GR2 724 aa17.71■□□□□ 0.42
ATRIP-208ENST00000639561 DOT1LQ8TEK3 1739 aa17.7■□□□□ 0.42
ATRIP-208ENST00000639561 NBPF6Q5VWK0 638 aa17.7■□□□□ 0.42
ATRIP-208ENST00000639561 ZCRB1Q8TBF4 217 aaKnown RBP17.7■□□□□ 0.42
ATRIP-208ENST00000639561 NBPF4Q96M43 638 aa17.7■□□□□ 0.42
ATRIP-208ENST00000639561 KCNQ2O43526 872 aa17.69■□□□□ 0.42
ATRIP-208ENST00000639561 ZNF853P0CG23 659 aa17.69■□□□□ 0.42
ATRIP-208ENST00000639561 MVPQ14764 893 aaKnown RBP17.69■□□□□ 0.42
ATRIP-208ENST00000639561 DZIP1LQ8IYY4 767 aaKnown RBP17.69■□□□□ 0.42
ATRIP-208ENST00000639561 DDX54Q8TDD1 881 aaKnown RBP17.69■□□□□ 0.42
ATRIP-208ENST00000639561 RAPGEF4Q8WZA2 1011 aa17.69■□□□□ 0.42
ATRIP-208ENST00000639561 PCDHB15Q9Y5E8 787 aa17.69■□□□□ 0.42
ATRIP-208ENST00000639561 TXNRD1Q16881 649 aa17.69■□□□□ 0.42
ATRIP-208ENST00000639561 IFT57Q9NWB7 429 aa17.69■□□□□ 0.42
ATRIP-208ENST00000639561 CALD1Q05682 793 aaKnown RBP17.68■□□□□ 0.42
ATRIP-208ENST00000639561 AAMPQ13685 434 aa17.68■□□□□ 0.42
ATRIP-208ENST00000639561 FTSJ3Q8IY81 847 aaKnown RBP17.68■□□□□ 0.42
ATRIP-208ENST00000639561 MBIPQ9NS73 344 aa17.68■□□□□ 0.42
ATRIP-208ENST00000639561 NOB1Q9ULX3 412 aaKnown RBP17.68■□□□□ 0.42
ATRIP-208ENST00000639561 TATP17735 454 aaPredicted RBP17.67■□□□□ 0.42
ATRIP-208ENST00000639561 DCTN1Q14203 1278 aa17.67■□□□□ 0.42
ATRIP-208ENST00000639561 ATF7IPQ6VMQ6 1270 aa17.67■□□□□ 0.42
ATRIP-208ENST00000639561 ANP32EQ9BTT0 268 aa17.67■□□□□ 0.42
ATRIP-208ENST00000639561 GNAI1P63096 354 aa17.67■□□□□ 0.42
ATRIP-208ENST00000639561 LMOD3Q0VAK6 560 aa17.67■□□□□ 0.42
ATRIP-208ENST00000639561 PROM2Q8N271 834 aa17.67■□□□□ 0.42
ATRIP-208ENST00000639561 CASZ1Q86V15 1759 aa17.67■□□□□ 0.42
ATRIP-208ENST00000639561 ALDH1L2Q3SY69 923 aa17.66■□□□□ 0.42
ATRIP-208ENST00000639561 USHBP1Q8N6Y0 703 aa17.66■□□□□ 0.42
ATRIP-208ENST00000639561 TSPYL6Q8N831 410 aa17.66■□□□□ 0.42
ATRIP-208ENST00000639561 RGS3P49796 1198 aa17.66■□□□□ 0.42
ATRIP-208ENST00000639561 STK32BQ9NY57 414 aa17.66■□□□□ 0.42
ATRIP-208ENST00000639561 PKD1L3Q7Z443 1732 aa17.65■□□□□ 0.42
ATRIP-208ENST00000639561 NCAPD2Q15021 1401 aa17.65■□□□□ 0.42
ATRIP-208ENST00000639561 ANP32AP39687 249 aaKnown RBP17.65■□□□□ 0.42
ATRIP-208ENST00000639561 CFAP44Q96MT7 982 aa17.65■□□□□ 0.42
ATRIP-208ENST00000639561 ANO8Q9HCE9 1232 aaPredicted RBP17.65■□□□□ 0.42
ATRIP-208ENST00000639561 KIF16BQ96L93 1317 aa17.65■□□□□ 0.42
ATRIP-208ENST00000639561 VAMP4O75379 141 aa17.64■□□□□ 0.41
ATRIP-208ENST00000639561 PAPPAQ13219 1627 aa17.64■□□□□ 0.41
ATRIP-208ENST00000639561 PCDH11XQ9BZA7 1347 aa17.64■□□□□ 0.41
ATRIP-208ENST00000639561 PCDH11YQ9BZA8 1340 aa17.64■□□□□ 0.41
ATRIP-208ENST00000639561 ZNF428Q96B54 188 aa17.64■□□□□ 0.41
ATRIP-208ENST00000639561 SPON1Q9HCB6 807 aa17.62■□□□□ 0.41
ATRIP-208ENST00000639561 BRPF1P55201 1214 aaPredicted RBP17.62■□□□□ 0.41
ATRIP-208ENST00000639561 LY75O60449 1722 aa17.62■□□□□ 0.41
ATRIP-208ENST00000639561 KDRP35968 1356 aa17.62■□□□□ 0.41
ATRIP-208ENST00000639561 ELL2O00472 640 aaPredicted RBP17.61■□□□□ 0.41
ATRIP-208ENST00000639561 ITPRIPQ8IWB1 547 aa17.61■□□□□ 0.41
ATRIP-208ENST00000639561 TMEM57Q8N5G2 664 aa17.61■□□□□ 0.41
ATRIP-208ENST00000639561 SYTL4Q96C24 671 aaPredicted RBP17.61■□□□□ 0.41
ATRIP-208ENST00000639561 SLC15A2Q16348 729 aa17.61■□□□□ 0.41
ATRIP-208ENST00000639561 C8orf34Q49A92 452 aa17.61■□□□□ 0.41
ATRIP-208ENST00000639561 NPM2Q86SE8 214 aaKnown RBP17.61■□□□□ 0.41
ATRIP-208ENST00000639561 C8orf58Q8NAV2 365 aa17.61■□□□□ 0.41
ATRIP-208ENST00000639561 IGSF1Q8N6C5 1336 aa17.61■□□□□ 0.41
ATRIP-208ENST00000639561 PRIM1P49642 420 aaKnown RBP17.6■□□□□ 0.41
ATRIP-208ENST00000639561 SLC27A3Q5K4L6 730 aa17.6■□□□□ 0.41
ATRIP-208ENST00000639561 IPO9Q96P70 1041 aaKnown RBP17.6■□□□□ 0.41
ATRIP-208ENST00000639561 EYA1Q99502 592 aa17.6■□□□□ 0.41
ATRIP-208ENST00000639561 IPO8O15397 1037 aaKnown RBP17.6■□□□□ 0.41
ATRIP-208ENST00000639561 MCM10Q7L590 875 aa17.6■□□□□ 0.41
ATRIP-208ENST00000639561 MRPL50Q8N5N7 158 aaKnown RBP17.6■□□□□ 0.41
ATRIP-208ENST00000639561 DDX19BQ9UMR2 479 aa17.6■□□□□ 0.41
ATRIP-208ENST00000639561 QSER1Q2KHR3 1735 aa17.59■□□□□ 0.41
ATRIP-208ENST00000639561 SRCAPQ6ZRS2 3230 aa17.59■□□□□ 0.41
ATRIP-208ENST00000639561 TWISTNBQ3B726 338 aaPredicted RBP17.59■□□□□ 0.41
ATRIP-208ENST00000639561 FAM161AQ3B820 660 aa17.59■□□□□ 0.41
ATRIP-208ENST00000639561 PLEKHG2Q9H7P9 1386 aa17.59■□□□□ 0.41
ATRIP-208ENST00000639561 PPP1R1BQ9UD71 204 aaPredicted RBP17.58■□□□□ 0.4
ATRIP-208ENST00000639561 SPG7Q9UQ90 795 aa17.58■□□□□ 0.4
ATRIP-208ENST00000639561 MTHFSDQ2M296 383 aaKnown RBP17.57■□□□□ 0.4
ATRIP-208ENST00000639561 RWDD1Q9H446 243 aaPredicted RBP17.57■□□□□ 0.4
ATRIP-208ENST00000639561 NOP58Q9Y2X3 529 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms