RNA–Protein interactions for RNA: ENST00000638914.1

PAX6-245, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 7,300 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-245ENST00000638914 ZSCAN31Q96LW9 406 aaPredicted RBP13.83□□□□□ -0.2
PAX6-245ENST00000638914 PRXQ9BXM0 1461 aa13.83□□□□□ -0.2
PAX6-245ENST00000638914 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.83□□□□□ -0.2
PAX6-245ENST00000638914 FANCAO15360 1455 aa13.83□□□□□ -0.2
PAX6-245ENST00000638914 CFAP45Q9UL16 551 aa13.82□□□□□ -0.2
PAX6-245ENST00000638914 CETN2P41208 172 aa13.82□□□□□ -0.2
PAX6-245ENST00000638914 CAGE1Q8TC20 777 aa13.82□□□□□ -0.2
PAX6-245ENST00000638914 ERCC4Q92889 916 aaPredicted RBP13.82□□□□□ -0.2
PAX6-245ENST00000638914 HSP90B2PQ58FF3 399 aa13.82□□□□□ -0.2
PAX6-245ENST00000638914 TSR2Q969E8 191 aaKnown RBP13.82□□□□□ -0.2
PAX6-245ENST00000638914 NSD3Q9BZ95 1437 aa13.82□□□□□ -0.2
PAX6-245ENST00000638914 SPDYE4A6NLX3 237 aa13.82□□□□□ -0.2
PAX6-245ENST00000638914 TMPOP42166 694 aaKnown RBP13.82□□□□□ -0.2
PAX6-245ENST00000638914 ARAP1Q96P48 1450 aa13.82□□□□□ -0.2
PAX6-245ENST00000638914 FBXO3Q9UK99 471 aa13.82□□□□□ -0.2
PAX6-245ENST00000638914 B4DLN1 442 aa13.81□□□□□ -0.2
PAX6-245ENST00000638914 MRPL12P52815 198 aaKnown RBP13.81□□□□□ -0.2
PAX6-245ENST00000638914 LRRC59Q96AG4 307 aaKnown RBP13.81□□□□□ -0.2
PAX6-245ENST00000638914 CCDC85AQ96PX6 553 aaPredicted RBP13.81□□□□□ -0.2
PAX6-245ENST00000638914 IFT57Q9NWB7 429 aa13.81□□□□□ -0.2
PAX6-245ENST00000638914 NBPF6Q5VWK0 638 aa13.81□□□□□ -0.2
PAX6-245ENST00000638914 NBPF5PQ86XG9 351 aaPredicted RBP13.81□□□□□ -0.2
PAX6-245ENST00000638914 NBPF4Q96M43 638 aa13.81□□□□□ -0.2
PAX6-245ENST00000638914 DCTN1Q14203 1278 aa13.81□□□□□ -0.2
PAX6-245ENST00000638914 TEX35Q5T0J7 233 aa13.81□□□□□ -0.2
PAX6-245ENST00000638914 ZGPATQ8N5A5 531 aaKnown RBP13.81□□□□□ -0.2
PAX6-245ENST00000638914 KRT85P78386 507 aa13.8□□□□□ -0.2
PAX6-245ENST00000638914 TTF1Q15361 905 aaPredicted RBP13.8□□□□□ -0.2
PAX6-245ENST00000638914 DDB1Q16531 1140 aa13.8□□□□□ -0.2
PAX6-245ENST00000638914 CCDC96Q2M329 555 aa13.8□□□□□ -0.2
PAX6-245ENST00000638914 KIF20AO95235 890 aa13.8□□□□□ -0.2
PAX6-245ENST00000638914 GSTO1P78417 241 aa13.8□□□□□ -0.2
PAX6-245ENST00000638914 STK11IPQ8N1F8 1099 aa13.8□□□□□ -0.2
PAX6-245ENST00000638914 ME1P48163 572 aa13.79□□□□□ -0.2
PAX6-245ENST00000638914 CCDC12Q8WUD4 166 aaPredicted RBP13.79□□□□□ -0.2
PAX6-245ENST00000638914 SETDB2Q96T68 719 aa13.79□□□□□ -0.2
PAX6-245ENST00000638914 TANGO6Q9C0B7 1094 aa13.79□□□□□ -0.2
PAX6-245ENST00000638914 DEF6Q9H4E7 631 aa13.79□□□□□ -0.2
PAX6-245ENST00000638914 TTC21AQ8NDW8 1320 aa13.79□□□□□ -0.2
PAX6-245ENST00000638914 MYD88Q99836 296 aa13.79□□□□□ -0.2
PAX6-245ENST00000638914 MINDY4BA8MYZ0 360 aa13.79□□□□□ -0.2
PAX6-245ENST00000638914 KDM4AO75164 1064 aa13.79□□□□□ -0.2
PAX6-245ENST00000638914 C8orf37Q96NL8 207 aa13.79□□□□□ -0.2
PAX6-245ENST00000638914 PHAXQ9H814 394 aaKnown RBP13.79□□□□□ -0.2
PAX6-245ENST00000638914 WDR33Q9C0J8 1336 aaKnown RBP13.79□□□□□ -0.2
PAX6-245ENST00000638914 FBXO31Q5XUX0 539 aaPredicted RBP13.79□□□□□ -0.2
PAX6-245ENST00000638914 C19orf44Q9H6X5 657 aa13.79□□□□□ -0.2
PAX6-245ENST00000638914 HMGB1P09429 215 aaKnown RBP13.78□□□□□ -0.2
PAX6-245ENST00000638914 SNRPA1P09661 255 aaKnown RBP13.78□□□□□ -0.2
PAX6-245ENST00000638914 CLEC11AQ9Y240 323 aa13.78□□□□□ -0.2
PAX6-245ENST00000638914 UHRF1BP1LA0JNW5 1464 aa13.78□□□□□ -0.2
PAX6-245ENST00000638914 CCDC152Q4G0S7 254 aa13.78□□□□□ -0.2
PAX6-245ENST00000638914 JDP2Q8WYK2 163 aa13.78□□□□□ -0.2
PAX6-245ENST00000638914 MVPQ14764 893 aaKnown RBP13.78□□□□□ -0.2
PAX6-245ENST00000638914 PPFIBP1Q86W92 1011 aa13.78□□□□□ -0.2
PAX6-245ENST00000638914 NLRP3Q96P20 1036 aa13.78□□□□□ -0.2
PAX6-245ENST00000638914 CWC25Q9NXE8 425 aaPredicted RBP13.78□□□□□ -0.2
PAX6-245ENST00000638914 MYCNP04198 464 aaPredicted RBP13.78□□□□□ -0.2
PAX6-245ENST00000638914 CCDC150Q8NCX0 1101 aa13.78□□□□□ -0.2
PAX6-245ENST00000638914 NYXQ9GZU5 481 aa13.78□□□□□ -0.2
PAX6-245ENST00000638914 NSD2O96028 1365 aa13.77□□□□□ -0.2
PAX6-245ENST00000638914 CEP57L1Q8IYX8 460 aa13.77□□□□□ -0.2
PAX6-245ENST00000638914 ZCRB1Q8TBF4 217 aaKnown RBP13.77□□□□□ -0.2
PAX6-245ENST00000638914 TMEM266Q2M3C6 531 aa13.77□□□□□ -0.2
PAX6-245ENST00000638914 LARP1BQ659C4 914 aaKnown RBP13.77□□□□□ -0.21
PAX6-245ENST00000638914 DNAAF4Q8WXU2 420 aa13.77□□□□□ -0.21
PAX6-245ENST00000638914 LDHAL6AQ6ZMR3 332 aa13.77□□□□□ -0.21
PAX6-245ENST00000638914 TRIM5Q9C035 493 aa13.77□□□□□ -0.21
PAX6-245ENST00000638914 C1orf115Q9H7X2 142 aa13.77□□□□□ -0.21
PAX6-245ENST00000638914 ZNF219Q9P2Y4 722 aaPredicted RBP13.77□□□□□ -0.21
PAX6-245ENST00000638914 DHX29Q7Z478 1369 aaKnown RBP13.77□□□□□ -0.21
PAX6-245ENST00000638914 KIF5BP33176 963 aa13.76□□□□□ -0.21
PAX6-245ENST00000638914 PDE4BQ07343 736 aa13.76□□□□□ -0.21
PAX6-245ENST00000638914 DRC1Q96MC2 740 aa13.76□□□□□ -0.21
PAX6-245ENST00000638914 CDCA7Q9BWT1 371 aaPredicted RBP13.76□□□□□ -0.21
PAX6-245ENST00000638914 BRPF1P55201 1214 aaPredicted RBP13.76□□□□□ -0.21
PAX6-245ENST00000638914 NEFHP12036 1026 aa13.76□□□□□ -0.21
PAX6-245ENST00000638914 ALDH1L2Q3SY69 923 aa13.76□□□□□ -0.21
PAX6-245ENST00000638914 NOM1Q5C9Z4 860 aaKnown RBP13.76□□□□□ -0.21
PAX6-245ENST00000638914 ANKRD24Q8TF21 1146 aa13.76□□□□□ -0.21
PAX6-245ENST00000638914 CHMP4BP1P59074 171 aa13.75□□□□□ -0.21
PAX6-245ENST00000638914 BAG4O95429 457 aaKnown RBP13.75□□□□□ -0.21
PAX6-245ENST00000638914 PDZRN3Q9UPQ7 1066 aa13.75□□□□□ -0.21
PAX6-245ENST00000638914 FGFR1OPO95684 399 aaKnown RBP13.75□□□□□ -0.21
PAX6-245ENST00000638914 CCDC178Q5BJE1 867 aa13.75□□□□□ -0.21
PAX6-245ENST00000638914 LMTK3Q96Q04 1460 aa13.75□□□□□ -0.21
PAX6-245ENST00000638914 CCDC181Q5TID7 509 aa13.75□□□□□ -0.21
PAX6-245ENST00000638914 DNAJC5BQ9UF47 199 aa13.75□□□□□ -0.21
PAX6-245ENST00000638914 TIAM1Q13009 1591 aa13.75□□□□□ -0.21
PAX6-245ENST00000638914 IBSPP21815 317 aaPredicted RBP13.74□□□□□ -0.21
PAX6-245ENST00000638914 NME9Q86XW9 330 aa13.74□□□□□ -0.21
PAX6-245ENST00000638914 CBFA2T2O43439 604 aa13.74□□□□□ -0.21
PAX6-245ENST00000638914 C11orf95C9JLR9 678 aaPredicted RBP13.74□□□□□ -0.21
PAX6-245ENST00000638914 SERPINC1P01008 464 aa13.74□□□□□ -0.21
PAX6-245ENST00000638914 UQCRFS1P1P0C7P4 283 aa13.74□□□□□ -0.21
PAX6-245ENST00000638914 LMOD1P29536 600 aaPredicted RBP13.74□□□□□ -0.21
PAX6-245ENST00000638914 CATIPQ7Z7H3 387 aa13.74□□□□□ -0.21
PAX6-245ENST00000638914 PARP3Q9Y6F1 533 aa13.74□□□□□ -0.21
PAX6-245ENST00000638914 BCAR3O75815 825 aa13.74□□□□□ -0.21
PAX6-245ENST00000638914 CCDC39Q9UFE4 941 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms