RNA–Protein interactions for RNA: ENST00000638802.1

PAX6-240, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,505 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-240ENST00000638802 LMOD3Q0VAK6 560 aa19.1■□□□□ 0.65
PAX6-240ENST00000638802 NEUROD2Q15784 382 aa19.1■□□□□ 0.65
PAX6-240ENST00000638802 MCM10Q7L590 875 aa19.1■□□□□ 0.65
PAX6-240ENST00000638802 CAMKK2Q96RR4 588 aa19.1■□□□□ 0.65
PAX6-240ENST00000638802 RRP7AQ9Y3A4 280 aaKnown RBP19.1■□□□□ 0.65
PAX6-240ENST00000638802 CEMIPQ8WUJ3 1361 aa19.09■□□□□ 0.65
PAX6-240ENST00000638802 APAF1O14727 1248 aa19.09■□□□□ 0.65
PAX6-240ENST00000638802 SMARCC1Q92922 1105 aaPredicted RBP19.09■□□□□ 0.65
PAX6-240ENST00000638802 DCTN1Q14203 1278 aa19.08■□□□□ 0.64
PAX6-240ENST00000638802 EZH2Q15910 746 aaKnown RBP19.08■□□□□ 0.64
PAX6-240ENST00000638802 PALLDQ8WX93 1383 aa19.06■□□□□ 0.64
PAX6-240ENST00000638802 ASAP1Q9ULH1 1129 aa19.05■□□□□ 0.64
PAX6-240ENST00000638802 ATG3Q9NT62 314 aa19.05■□□□□ 0.64
PAX6-240ENST00000638802 LY75O60449 1722 aa19.04■□□□□ 0.64
PAX6-240ENST00000638802 SIPA1L3O60292 1781 aaPredicted RBP19.04■□□□□ 0.64
PAX6-240ENST00000638802 TXNRD1Q16881 649 aa19.04■□□□□ 0.64
PAX6-240ENST00000638802 RREB1Q92766 1687 aa19.04■□□□□ 0.64
PAX6-240ENST00000638802 SLC27A3Q5K4L6 730 aa19.03■□□□□ 0.64
PAX6-240ENST00000638802 TRIM35Q9UPQ4 493 aa19.03■□□□□ 0.64
PAX6-240ENST00000638802 BTBD11A6QL63 1104 aa19.02■□□□□ 0.64
PAX6-240ENST00000638802 PROM2Q8N271 834 aa19.02■□□□□ 0.64
PAX6-240ENST00000638802 THUMPD2Q9BTF0 503 aaKnown RBP19.02■□□□□ 0.64
PAX6-240ENST00000638802 TAF7Q15545 349 aaPredicted RBP19.01■□□□□ 0.63
PAX6-240ENST00000638802 TTC5Q8N0Z6 440 aa19.01■□□□□ 0.63
PAX6-240ENST00000638802 CCNL1Q9UK58 526 aaPredicted RBP19.01■□□□□ 0.63
PAX6-240ENST00000638802 PAPPAQ13219 1627 aa19.01■□□□□ 0.63
PAX6-240ENST00000638802 SLC39A6Q13433 755 aa19■□□□□ 0.63
PAX6-240ENST00000638802 LOC102724428A0A0B4J2F2 783 aa19■□□□□ 0.63
PAX6-240ENST00000638802 SIK1P57059 783 aa19■□□□□ 0.63
PAX6-240ENST00000638802 NCBP3Q53F19 620 aaKnown RBP19■□□□□ 0.63
PAX6-240ENST00000638802 RBM42Q9BTD8 480 aaKnown RBP19■□□□□ 0.63
PAX6-240ENST00000638802 NUP188Q5SRE5 1749 aa18.99■□□□□ 0.63
PAX6-240ENST00000638802 SENP3-EIF4A1A0A087X0R7 540 aa18.99■□□□□ 0.63
PAX6-240ENST00000638802 HMGB2P26583 209 aaKnown RBP18.99■□□□□ 0.63
PAX6-240ENST00000638802 CCDC27Q2M243 656 aa18.99■□□□□ 0.63
PAX6-240ENST00000638802 ZNF790Q6PG37 636 aa18.99■□□□□ 0.63
PAX6-240ENST00000638802 PTCD1O75127 700 aaKnown RBP18.98■□□□□ 0.63
PAX6-240ENST00000638802 LRRC4BQ9NT99 713 aa18.98■□□□□ 0.63
PAX6-240ENST00000638802 ATP6V1AP38606 617 aa18.97■□□□□ 0.63
PAX6-240ENST00000638802 CALD1Q05682 793 aaKnown RBP18.97■□□□□ 0.63
PAX6-240ENST00000638802 NGEFQ8N5V2 710 aa18.97■□□□□ 0.63
PAX6-240ENST00000638802 KCNQ4P56696 695 aa18.96■□□□□ 0.63
PAX6-240ENST00000638802 NBPF14Q5TI25 921 aa18.96■□□□□ 0.63
PAX6-240ENST00000638802 UBR2Q8IWV8 1755 aa18.96■□□□□ 0.63
PAX6-240ENST00000638802 KCPQ6ZWJ8 1503 aa18.96■□□□□ 0.63
PAX6-240ENST00000638802 BABAM1Q9NWV8 329 aa18.95■□□□□ 0.62
PAX6-240ENST00000638802 MIS18AQ9NYP9 233 aa18.95■□□□□ 0.62
PAX6-240ENST00000638802 SALL2Q9Y467 1007 aaPredicted RBP18.95■□□□□ 0.62
PAX6-240ENST00000638802 ZNF831Q5JPB2 1677 aa18.95■□□□□ 0.62
PAX6-240ENST00000638802 WWC1Q8IX03 1113 aa18.95■□□□□ 0.62
PAX6-240ENST00000638802 C5P01031 1676 aa18.94■□□□□ 0.62
PAX6-240ENST00000638802 KCNQ3O43525 872 aa18.94■□□□□ 0.62
PAX6-240ENST00000638802 FMNL2Q96PY5 1086 aa18.94■□□□□ 0.62
PAX6-240ENST00000638802 SLC4A9Q96Q91 983 aa18.94■□□□□ 0.62
PAX6-240ENST00000638802 TSPYL4Q9UJ04 414 aa18.94■□□□□ 0.62
PAX6-240ENST00000638802 LAS1LQ9Y4W2 734 aaKnown RBP18.94■□□□□ 0.62
PAX6-240ENST00000638802 TAF1LQ8IZX4 1826 aa18.93■□□□□ 0.62
PAX6-240ENST00000638802 KDM3BQ7LBC6 1761 aa18.93■□□□□ 0.62
PAX6-240ENST00000638802 VSIG10Q8N0Z9 540 aa18.93■□□□□ 0.62
PAX6-240ENST00000638802 ZNF496Q96IT1 587 aaPredicted RBP18.93■□□□□ 0.62
PAX6-240ENST00000638802 ITPK1Q13572 414 aa18.92■□□□□ 0.62
PAX6-240ENST00000638802 CFAP44Q96MT7 982 aa18.92■□□□□ 0.62
PAX6-240ENST00000638802 STK32BQ9NY57 414 aa18.92■□□□□ 0.62
PAX6-240ENST00000638802 HEG1Q9ULI3 1381 aa18.92■□□□□ 0.62
PAX6-240ENST00000638802 CHL1O00533 1208 aa18.91■□□□□ 0.62
PAX6-240ENST00000638802 GNAI1P63096 354 aa18.91■□□□□ 0.62
PAX6-240ENST00000638802 IFT57Q9NWB7 429 aa18.91■□□□□ 0.62
PAX6-240ENST00000638802 CICQ96RK0 1608 aaPredicted RBP18.91■□□□□ 0.62
PAX6-240ENST00000638802 LINC00116Q8NCU8 138 aa18.9■□□□□ 0.62
PAX6-240ENST00000638802 ANO8Q9HCE9 1232 aaPredicted RBP18.9■□□□□ 0.62
PAX6-240ENST00000638802 TJP1Q07157 1748 aa18.9■□□□□ 0.62
PAX6-240ENST00000638802 SLC15A2Q16348 729 aa18.9■□□□□ 0.62
PAX6-240ENST00000638802 WDR63Q8IWG1 891 aa18.9■□□□□ 0.62
PAX6-240ENST00000638802 C4BP0C0L5 1744 aa18.89■□□□□ 0.61
PAX6-240ENST00000638802 DNAJC10Q8IXB1 793 aa18.89■□□□□ 0.61
PAX6-240ENST00000638802 AKT1S1Q96B36 256 aa18.89■□□□□ 0.61
PAX6-240ENST00000638802 TEX13AQ9BXU3 409 aaPredicted RBP18.89■□□□□ 0.61
PAX6-240ENST00000638802 COL5A3P25940 1745 aaPredicted RBP18.88■□□□□ 0.61
PAX6-240ENST00000638802 IL16Q14005 1332 aa18.88■□□□□ 0.61
PAX6-240ENST00000638802 SNRPA1P09661 255 aaKnown RBP18.88■□□□□ 0.61
PAX6-240ENST00000638802 ZNF853P0CG23 659 aa18.88■□□□□ 0.61
PAX6-240ENST00000638802 EIF4A1P60842 406 aaKnown RBP18.88■□□□□ 0.61
PAX6-240ENST00000638802 ZNF827Q17R98 1081 aa18.88■□□□□ 0.61
PAX6-240ENST00000638802 AK7Q96M32 723 aa18.88■□□□□ 0.61
PAX6-240ENST00000638802 MBIPQ9NS73 344 aa18.87■□□□□ 0.61
PAX6-240ENST00000638802 CNTNAP4Q9C0A0 1308 aa18.87■□□□□ 0.61
PAX6-240ENST00000638802 STARD3NLO95772 234 aa18.86■□□□□ 0.61
PAX6-240ENST00000638802 R3HDM1Q15032 1099 aaKnown RBP18.86■□□□□ 0.61
PAX6-240ENST00000638802 TFCP2L1Q9NZI6 479 aa18.86■□□□□ 0.61
PAX6-240ENST00000638802 CRKLP46109 303 aaKnown RBP18.85■□□□□ 0.61
PAX6-240ENST00000638802 RC3H1Q5TC82 1133 aaKnown RBP18.85■□□□□ 0.61
PAX6-240ENST00000638802 CYP19A1P11511 503 aaPredicted RBP18.84■□□□□ 0.61
PAX6-240ENST00000638802 ZNF521Q96K83 1311 aa18.84■□□□□ 0.61
PAX6-240ENST00000638802 PSDA5PKW4 1024 aaPredicted RBP18.84■□□□□ 0.61
PAX6-240ENST00000638802 GNPATO15228 680 aa18.84■□□□□ 0.61
PAX6-240ENST00000638802 GIGYF1O75420 1035 aaPredicted RBP18.84■□□□□ 0.61
PAX6-240ENST00000638802 PRAMEF22A3QJZ6 481 aa18.83■□□□□ 0.6
PAX6-240ENST00000638802 HNRNPUQ00839 825 aaKnown RBP eCLIP18.83■□□□□ 0.6
PAX6-240ENST00000638802 CCDC87Q9NVE4 849 aa18.83■□□□□ 0.6
PAX6-240ENST00000638802 QSER1Q2KHR3 1735 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms