RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 CTIFO43310 598 aaKnown RBP14.73□□□□□ -0.05
GFAP-228ENST00000638488 TMEM63CQ9P1W3 806 aa14.73□□□□□ -0.05
GFAP-228ENST00000638488 AATKQ6ZMQ8 1374 aa14.72□□□□□ -0.05
GFAP-228ENST00000638488 SYCE3A1L190 88 aa14.72□□□□□ -0.05
GFAP-228ENST00000638488 CT47B1P0C2W7 299 aaPredicted RBP14.72□□□□□ -0.05
GFAP-228ENST00000638488 NUCB1Q02818 461 aa14.72□□□□□ -0.05
GFAP-228ENST00000638488 AEBP1Q8IUX7 1158 aa14.72□□□□□ -0.05
GFAP-228ENST00000638488 CDK12Q9NYV4 1490 aaPredicted RBP14.72□□□□□ -0.05
GFAP-228ENST00000638488 U2AF2P26368 475 aaKnown RBP eCLIP14.72□□□□□ -0.05
GFAP-228ENST00000638488 SYCP1Q15431 976 aa14.72□□□□□ -0.05
GFAP-228ENST00000638488 UVSSAQ2YD98 709 aa14.72□□□□□ -0.05
GFAP-228ENST00000638488 SULT6B1Q6IMI4 303 aa14.72□□□□□ -0.05
GFAP-228ENST00000638488 RBM27Q9P2N5 1060 aaKnown RBP14.72□□□□□ -0.05
GFAP-228ENST00000638488 DDX19BQ9UMR2 479 aa14.72□□□□□ -0.05
GFAP-228ENST00000638488 AKAP12Q02952 1782 aa14.71□□□□□ -0.05
GFAP-228ENST00000638488 PRPF40AO75400 957 aaKnown RBP14.71□□□□□ -0.05
GFAP-228ENST00000638488 RABEP1Q15276 862 aa14.71□□□□□ -0.05
GFAP-228ENST00000638488 RBM33Q96EV2 1170 aaKnown RBP14.71□□□□□ -0.05
GFAP-228ENST00000638488 CHAF1AQ13111 956 aaPredicted RBP14.71□□□□□ -0.06
GFAP-228ENST00000638488 EIF4A2Q14240 407 aaKnown RBP14.71□□□□□ -0.06
GFAP-228ENST00000638488 HSP90AB2PQ58FF8 381 aa14.71□□□□□ -0.06
GFAP-228ENST00000638488 ATF7IPQ6VMQ6 1270 aa14.71□□□□□ -0.06
GFAP-228ENST00000638488 PLCD3Q8N3E9 789 aa14.71□□□□□ -0.06
GFAP-228ENST00000638488 TSPY26PQ9H489 355 aa14.71□□□□□ -0.06
GFAP-228ENST00000638488 TBX22Q9Y458 520 aa14.71□□□□□ -0.06
GFAP-228ENST00000638488 ZBTB22O15209 634 aa14.7□□□□□ -0.06
GFAP-228ENST00000638488 PAXIP1Q6ZW49 1069 aaPredicted RBP14.7□□□□□ -0.06
GFAP-228ENST00000638488 FAM184AQ8NB25 1140 aa14.7□□□□□ -0.06
GFAP-228ENST00000638488 PLEKHG3A1L390 1219 aa14.7□□□□□ -0.06
GFAP-228ENST00000638488 USP6P35125 1406 aa14.7□□□□□ -0.06
GFAP-228ENST00000638488 NUTM2GQ5VZR2 741 aa14.7□□□□□ -0.06
GFAP-228ENST00000638488 TSPYL6Q8N831 410 aa14.7□□□□□ -0.06
GFAP-228ENST00000638488 KCNA6P17658 529 aa14.69□□□□□ -0.06
GFAP-228ENST00000638488 KCNJ4P48050 445 aa14.69□□□□□ -0.06
GFAP-228ENST00000638488 FAM193AP78312 1265 aa14.69□□□□□ -0.06
GFAP-228ENST00000638488 TMEM57Q8N5G2 664 aa14.69□□□□□ -0.06
GFAP-228ENST00000638488 TIGD1Q96MW7 591 aa14.69□□□□□ -0.06
GFAP-228ENST00000638488 TSPYL1Q9H0U9 437 aa14.69□□□□□ -0.06
GFAP-228ENST00000638488 SLFN14P0C7P3 912 aa14.68□□□□□ -0.06
GFAP-228ENST00000638488 MBIPQ9NS73 344 aa14.68□□□□□ -0.06
GFAP-228ENST00000638488 SYAP1Q96A49 352 aaPredicted RBP14.68□□□□□ -0.06
GFAP-228ENST00000638488 RBM42Q9BTD8 480 aaKnown RBP14.68□□□□□ -0.06
GFAP-228ENST00000638488 SLIT1O75093 1534 aa14.68□□□□□ -0.06
GFAP-228ENST00000638488 ARHGAP23Q9P227 1491 aa14.67□□□□□ -0.06
GFAP-228ENST00000638488 IGSF3O75054 1194 aa14.67□□□□□ -0.06
GFAP-228ENST00000638488 C14orf37Q86TY3 774 aa14.67□□□□□ -0.06
GFAP-228ENST00000638488 RNF214Q8ND24 703 aa14.67□□□□□ -0.06
GFAP-228ENST00000638488 CFAP44Q96MT7 982 aa14.67□□□□□ -0.06
GFAP-228ENST00000638488 TULP2O00295 520 aa14.66□□□□□ -0.06
GFAP-228ENST00000638488 PHF14O94880 888 aa14.66□□□□□ -0.06
GFAP-228ENST00000638488 GNAI1P63096 354 aa14.66□□□□□ -0.06
GFAP-228ENST00000638488 CHD1LQ86WJ1 897 aa14.66□□□□□ -0.06
GFAP-228ENST00000638488 CREBRFQ8IUR6 639 aa14.66□□□□□ -0.06
GFAP-228ENST00000638488 TEX2Q8IWB9 1127 aa14.66□□□□□ -0.06
GFAP-228ENST00000638488 RIOK3O14730 519 aaKnown RBP14.66□□□□□ -0.06
GFAP-228ENST00000638488 IPO8O15397 1037 aaKnown RBP14.66□□□□□ -0.06
GFAP-228ENST00000638488 TBC1D9Q6ZT07 1266 aa14.66□□□□□ -0.06
GFAP-228ENST00000638488 CALCOCO1Q9P1Z2 691 aa14.66□□□□□ -0.06
GFAP-228ENST00000638488 OVOS2A0A0J9YW53 1432 aa14.65□□□□□ -0.06
GFAP-228ENST00000638488 OVOS2Q6IE36 1432 aa14.65□□□□□ -0.06
GFAP-228ENST00000638488 FAM177BA6PVY3 158 aa14.65□□□□□ -0.06
GFAP-228ENST00000638488 IRX3P78415 501 aaPredicted RBP14.65□□□□□ -0.06
GFAP-228ENST00000638488 CTNNA3Q9UI47 895 aa14.65□□□□□ -0.06
GFAP-228ENST00000638488 VAMP4O75379 141 aa14.65□□□□□ -0.06
GFAP-228ENST00000638488 CHRM1P11229 460 aaPredicted RBP14.65□□□□□ -0.06
GFAP-228ENST00000638488 LMOD3Q0VAK6 560 aa14.65□□□□□ -0.06
GFAP-228ENST00000638488 MCM10Q7L590 875 aa14.65□□□□□ -0.06
GFAP-228ENST00000638488 IFT57Q9NWB7 429 aa14.65□□□□□ -0.06
GFAP-228ENST00000638488 DDX41Q9UJV9 622 aaKnown RBP14.65□□□□□ -0.06
GFAP-228ENST00000638488 TOPAZ1Q8N9V7 1692 aa14.65□□□□□ -0.06
GFAP-228ENST00000638488 TWISTNBQ3B726 338 aaPredicted RBP14.64□□□□□ -0.07
GFAP-228ENST00000638488 MORC2Q9Y6X9 1032 aaPredicted RBP14.64□□□□□ -0.07
GFAP-228ENST00000638488 RGPD8O14715 1765 aaPredicted RBP14.64□□□□□ -0.07
GFAP-228ENST00000638488 TPM3P06753 285 aa14.64□□□□□ -0.07
GFAP-228ENST00000638488 AMPHP49418 695 aa14.64□□□□□ -0.07
GFAP-228ENST00000638488 NLRP6P59044 892 aa14.64□□□□□ -0.07
GFAP-228ENST00000638488 C8orf58Q8NAV2 365 aa14.64□□□□□ -0.07
GFAP-228ENST00000638488 NRKQ7Z2Y5 1582 aa14.64□□□□□ -0.07
GFAP-228ENST00000638488 MAP3K19Q56UN5 1328 aa14.64□□□□□ -0.07
GFAP-228ENST00000638488 TERF2Q15554 542 aa14.63□□□□□ -0.07
GFAP-228ENST00000638488 ALDH1L2Q3SY69 923 aa14.63□□□□□ -0.07
GFAP-228ENST00000638488 DIP2AQ14689 1571 aa14.63□□□□□ -0.07
GFAP-228ENST00000638488 PKP1Q13835 747 aa14.63□□□□□ -0.07
GFAP-228ENST00000638488 LNPKQ9C0E8 428 aa14.63□□□□□ -0.07
GFAP-228ENST00000638488 ZBTB40Q9NUA8 1239 aa14.63□□□□□ -0.07
GFAP-228ENST00000638488 ZDHHC9Q9Y397 364 aa14.62□□□□□ -0.07
GFAP-228ENST00000638488 PTCH1Q13635 1447 aa14.62□□□□□ -0.07
GFAP-228ENST00000638488 DLG5Q8TDM6 1919 aa14.62□□□□□ -0.07
GFAP-228ENST00000638488 CDC45O75419 566 aa14.62□□□□□ -0.07
GFAP-228ENST00000638488 KRT24Q2M2I5 525 aa14.62□□□□□ -0.07
GFAP-228ENST00000638488 KIAA1524Q8TCG1 905 aa14.62□□□□□ -0.07
GFAP-228ENST00000638488 TTC12Q9H892 705 aaPredicted RBP14.62□□□□□ -0.07
GFAP-228ENST00000638488 NSFL1CQ9UNZ2 370 aaKnown RBP14.62□□□□□ -0.07
GFAP-228ENST00000638488 NCBP1Q09161 790 aaKnown RBP14.62□□□□□ -0.07
GFAP-228ENST00000638488 C1orf115Q9H7X2 142 aa14.62□□□□□ -0.07
GFAP-228ENST00000638488 ZNF853P0CG23 659 aa14.61□□□□□ -0.07
GFAP-228ENST00000638488 MRPL50Q8N5N7 158 aaKnown RBP14.61□□□□□ -0.07
GFAP-228ENST00000638488 RIMS1Q86UR5 1692 aaKnown RBP14.61□□□□□ -0.07
GFAP-228ENST00000638488 TTC21AQ8NDW8 1320 aa14.61□□□□□ -0.07
GFAP-228ENST00000638488 LTV1Q96GA3 475 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms