RNA–Protein interactions for RNA: ENST00000638099.1

GABRB3-225, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 2,752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-225ENST00000638099 KIF24Q5T7B8 1368 aa9.9□□□□□ -0.83
GABRB3-225ENST00000638099 BTBD11A6QL63 1104 aa9.9□□□□□ -0.83
GABRB3-225ENST00000638099 PODXL2Q9NZ53 605 aa9.9□□□□□ -0.83
GABRB3-225ENST00000638099 TRPM3Q9HCF6 1732 aaPredicted RBP9.89□□□□□ -0.83
GABRB3-225ENST00000638099 SLC39A6Q13433 755 aa9.89□□□□□ -0.83
GABRB3-225ENST00000638099 PLEKHO1Q53GL0 409 aaPredicted RBP9.89□□□□□ -0.83
GABRB3-225ENST00000638099 USP54Q70EL1 1684 aa9.89□□□□□ -0.83
GABRB3-225ENST00000638099 MED1Q15648 1581 aaPredicted RBP9.89□□□□□ -0.83
GABRB3-225ENST00000638099 C1orf141Q5JVX7 400 aa9.89□□□□□ -0.83
GABRB3-225ENST00000638099 CEP85Q6P2H3 762 aa9.89□□□□□ -0.83
GABRB3-225ENST00000638099 CHPF2Q9P2E5 772 aa9.89□□□□□ -0.83
GABRB3-225ENST00000638099 VIRMAQ69YN4 1812 aaKnown RBP9.89□□□□□ -0.83
GABRB3-225ENST00000638099 CCDC30Q5VVM6 783 aa9.88□□□□□ -0.83
GABRB3-225ENST00000638099 PTPRCP08575 1304 aa9.88□□□□□ -0.83
GABRB3-225ENST00000638099 ERBB3P21860 1342 aa9.88□□□□□ -0.83
GABRB3-225ENST00000638099 HTATSF1O43719 755 aaKnown RBP9.88□□□□□ -0.83
GABRB3-225ENST00000638099 EIF4A1P60842 406 aaKnown RBP9.88□□□□□ -0.83
GABRB3-225ENST00000638099 CADPS2Q86UW7 1296 aa9.88□□□□□ -0.83
GABRB3-225ENST00000638099 RNMTO43148 476 aaKnown RBP9.87□□□□□ -0.83
GABRB3-225ENST00000638099 PIP4K2AP48426 406 aaPredicted RBP9.87□□□□□ -0.83
GABRB3-225ENST00000638099 TSHZ3Q63HK5 1081 aa9.87□□□□□ -0.83
GABRB3-225ENST00000638099 BRINP3Q76B58 766 aa9.87□□□□□ -0.83
GABRB3-225ENST00000638099 DDRGK1Q96HY6 314 aa9.87□□□□□ -0.83
GABRB3-225ENST00000638099 EXOC6BQ9Y2D4 811 aa9.87□□□□□ -0.83
GABRB3-225ENST00000638099 ATP10DQ9P241 1426 aa9.87□□□□□ -0.83
GABRB3-225ENST00000638099 HAP1P54257 671 aaPredicted RBP9.87□□□□□ -0.83
GABRB3-225ENST00000638099 PROSER3Q2NL68 480 aa9.87□□□□□ -0.83
GABRB3-225ENST00000638099 AKAP4Q5JQC9 854 aa9.87□□□□□ -0.83
GABRB3-225ENST00000638099 SLIT3O75094 1523 aa9.86□□□□□ -0.83
GABRB3-225ENST00000638099 ANKRD44Q8N8A2 993 aa9.86□□□□□ -0.83
GABRB3-225ENST00000638099 GCC1Q96CN9 775 aa9.86□□□□□ -0.83
GABRB3-225ENST00000638099 SLKQ9H2G2 1235 aaPredicted RBP9.86□□□□□ -0.83
GABRB3-225ENST00000638099 LRRC37A3O60309 1634 aa9.86□□□□□ -0.83
GABRB3-225ENST00000638099 CEMIPQ8WUJ3 1361 aa9.86□□□□□ -0.83
GABRB3-225ENST00000638099 RAPGEF4Q8WZA2 1011 aa9.86□□□□□ -0.83
GABRB3-225ENST00000638099 PNMA6EA0A0J9YXQ4 647 aa9.86□□□□□ -0.83
GABRB3-225ENST00000638099 LRRFIP2Q9Y608 721 aaKnown RBP9.86□□□□□ -0.83
GABRB3-225ENST00000638099 NPHP3Q7Z494 1330 aa9.85□□□□□ -0.83
GABRB3-225ENST00000638099 AIMP1Q12904 312 aaKnown RBP9.85□□□□□ -0.83
GABRB3-225ENST00000638099 CHMP4BQ9H444 224 aaKnown RBP9.85□□□□□ -0.83
GABRB3-225ENST00000638099 DCTPP1Q9H773 170 aa9.85□□□□□ -0.83
GABRB3-225ENST00000638099 UPF2Q9HAU5 1272 aaKnown RBP9.85□□□□□ -0.83
GABRB3-225ENST00000638099 USP35Q9P2H5 1018 aa9.85□□□□□ -0.83
GABRB3-225ENST00000638099 GSPT1P15170 499 aaKnown RBP9.85□□□□□ -0.83
GABRB3-225ENST00000638099 NFATC2IPQ8NCF5 419 aa9.85□□□□□ -0.83
GABRB3-225ENST00000638099 TBC1D32Q96NH3 1257 aa9.85□□□□□ -0.83
GABRB3-225ENST00000638099 PI4KAP2A4QPH2 592 aa9.84□□□□□ -0.83
GABRB3-225ENST00000638099 PI4KAP1Q8N8J0 262 aa9.84□□□□□ -0.83
GABRB3-225ENST00000638099 ALS2Q96Q42 1657 aa9.84□□□□□ -0.83
GABRB3-225ENST00000638099 C22orf23Q9BZE7 217 aa9.84□□□□□ -0.83
GABRB3-225ENST00000638099 FAM208AQ9UK61 1670 aaKnown RBP9.84□□□□□ -0.83
GABRB3-225ENST00000638099 XIRP1Q702N8 1843 aaKnown RBP9.84□□□□□ -0.83
GABRB3-225ENST00000638099 SPATA31A3Q5VYP0 1347 aa9.84□□□□□ -0.83
GABRB3-225ENST00000638099 CCT4P50991 539 aaKnown RBP9.84□□□□□ -0.83
GABRB3-225ENST00000638099 AMOTQ4VCS5 1084 aa9.84□□□□□ -0.83
GABRB3-225ENST00000638099 PLEKHM2Q8IWE5 1019 aa9.84□□□□□ -0.83
GABRB3-225ENST00000638099 STRN4Q9NRL3 753 aa9.84□□□□□ -0.83
GABRB3-225ENST00000638099 SLAIN2Q9P270 581 aa9.84□□□□□ -0.83
GABRB3-225ENST00000638099 MEGF6O75095 1541 aa9.83□□□□□ -0.84
GABRB3-225ENST00000638099 PRDM11Q9NQV5 511 aa9.83□□□□□ -0.84
GABRB3-225ENST00000638099 KIF1AQ12756 1690 aa9.83□□□□□ -0.84
GABRB3-225ENST00000638099 TNS3Q68CZ2 1445 aa9.83□□□□□ -0.84
GABRB3-225ENST00000638099 STRCQ7RTU9 1775 aa9.83□□□□□ -0.84
GABRB3-225ENST00000638099 GNAI2P04899 355 aa9.83□□□□□ -0.84
GABRB3-225ENST00000638099 NBPF7P0C2Y1 421 aaPredicted RBP9.83□□□□□ -0.84
GABRB3-225ENST00000638099 MYL6BP14649 208 aa9.83□□□□□ -0.84
GABRB3-225ENST00000638099 TATP17735 454 aaPredicted RBP9.83□□□□□ -0.84
GABRB3-225ENST00000638099 PIAS4Q8N2W9 510 aaPredicted RBP9.83□□□□□ -0.84
GABRB3-225ENST00000638099 USP44Q9H0E7 712 aa9.83□□□□□ -0.84
GABRB3-225ENST00000638099 TBC1D9Q6ZT07 1266 aa9.82□□□□□ -0.84
GABRB3-225ENST00000638099 RPAP2Q8IXW5 612 aaPredicted RBP9.82□□□□□ -0.84
GABRB3-225ENST00000638099 CYP27B1O15528 508 aa9.82□□□□□ -0.84
GABRB3-225ENST00000638099 GIGYF1O75420 1035 aaPredicted RBP9.81□□□□□ -0.84
GABRB3-225ENST00000638099 CWF19L2Q2TBE0 894 aaKnown RBP9.81□□□□□ -0.84
GABRB3-225ENST00000638099 JARID2Q92833 1246 aaPredicted RBP9.81□□□□□ -0.84
GABRB3-225ENST00000638099 IL1RAPL2Q9NP60 686 aa9.81□□□□□ -0.84
GABRB3-225ENST00000638099 PHKG2P15735 406 aa9.81□□□□□ -0.84
GABRB3-225ENST00000638099 BMP2KLQ5H9B9 411 aa9.81□□□□□ -0.84
GABRB3-225ENST00000638099 TOM1L2Q6ZVM7 507 aa9.81□□□□□ -0.84
GABRB3-225ENST00000638099 TBC1D2Q9BYX2 928 aa9.81□□□□□ -0.84
GABRB3-225ENST00000638099 PHRF1Q9P1Y6 1649 aaKnown RBP9.81□□□□□ -0.84
GABRB3-225ENST00000638099 UBTFL1P0CB47 393 aaPredicted RBP9.8□□□□□ -0.84
GABRB3-225ENST00000638099 RTL5Q5HYW3 569 aaPredicted RBP9.8□□□□□ -0.84
GABRB3-225ENST00000638099 RBM42Q9BTD8 480 aaKnown RBP9.8□□□□□ -0.84
GABRB3-225ENST00000638099 MAP3K2Q9Y2U5 619 aa9.8□□□□□ -0.84
GABRB3-225ENST00000638099 KDM6AO15550 1401 aaPredicted RBP9.8□□□□□ -0.84
GABRB3-225ENST00000638099 LMO7Q8WWI1 1683 aa9.8□□□□□ -0.84
GABRB3-225ENST00000638099 DNAAF4Q8WXU2 420 aa9.8□□□□□ -0.84
GABRB3-225ENST00000638099 SRCIN1Q9C0H9 1055 aa9.8□□□□□ -0.84
GABRB3-225ENST00000638099 KAT6BQ8WYB5 2073 aa9.8□□□□□ -0.84
GABRB3-225ENST00000638099 PPP4R3CPQ6ZMV5 832 aa9.8□□□□□ -0.84
GABRB3-225ENST00000638099 DDX54Q8TDD1 881 aaKnown RBP9.8□□□□□ -0.84
GABRB3-225ENST00000638099 ZNF496Q96IT1 587 aaPredicted RBP9.8□□□□□ -0.84
GABRB3-225ENST00000638099 KDM3BQ7LBC6 1761 aa9.8□□□□□ -0.84
GABRB3-225ENST00000638099 ZNF790Q6PG37 636 aa9.79□□□□□ -0.84
GABRB3-225ENST00000638099 PPP1R42Q7Z4L9 355 aa9.79□□□□□ -0.84
GABRB3-225ENST00000638099 USP16Q9Y5T5 823 aa9.79□□□□□ -0.84
GABRB3-225ENST00000638099 ADCY9O60503 1353 aa9.79□□□□□ -0.84
GABRB3-225ENST00000638099 HMMRO75330 724 aa9.79□□□□□ -0.84
GABRB3-225ENST00000638099 GNAI3P08754 354 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms