RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 IP6K1Q92551 441 aa13.03□□□□□ -0.32
CACNA1A-236ENST00000637117 SYTL4Q96C24 671 aaPredicted RBP13.03□□□□□ -0.32
CACNA1A-236ENST00000637117 LTV1Q96GA3 475 aaPredicted RBP13.03□□□□□ -0.32
CACNA1A-236ENST00000637117 TRPC6Q9Y210 931 aa13.03□□□□□ -0.32
CACNA1A-236ENST00000637117 SBNO2Q9Y2G9 1366 aa13.03□□□□□ -0.32
CACNA1A-236ENST00000637117 NLGN2Q8NFZ4 835 aa13.02□□□□□ -0.33
CACNA1A-236ENST00000637117 TULP1O00294 542 aaPredicted RBP13.01□□□□□ -0.33
CACNA1A-236ENST00000637117 CD163L1Q9NR16 1453 aa13.01□□□□□ -0.33
CACNA1A-236ENST00000637117 MON2Q7Z3U7 1717 aa13.01□□□□□ -0.33
CACNA1A-236ENST00000637117 LTN1O94822 1766 aa13□□□□□ -0.33
CACNA1A-236ENST00000637117 GRIN3BO60391 1043 aa13□□□□□ -0.33
CACNA1A-236ENST00000637117 TERF2IPQ9NYB0 399 aa13□□□□□ -0.33
CACNA1A-236ENST00000637117 ANKRD36BQ8N2N9 1353 aa12.99□□□□□ -0.33
CACNA1A-236ENST00000637117 C19orf67A6NJJ6 358 aa12.99□□□□□ -0.33
CACNA1A-236ENST00000637117 MKRN3Q13064 507 aaKnown RBP12.99□□□□□ -0.33
CACNA1A-236ENST00000637117 IFFO2Q5TF58 517 aa12.99□□□□□ -0.33
CACNA1A-236ENST00000637117 ZCRB1Q8TBF4 217 aaKnown RBP12.99□□□□□ -0.33
CACNA1A-236ENST00000637117 LARP6Q9BRS8 491 aaKnown RBP12.99□□□□□ -0.33
CACNA1A-236ENST00000637117 CARD11Q9BXL7 1154 aa12.99□□□□□ -0.33
CACNA1A-236ENST00000637117 USP54Q70EL1 1684 aa12.99□□□□□ -0.33
CACNA1A-236ENST00000637117 EDC4Q6P2E9 1401 aaKnown RBP12.98□□□□□ -0.33
CACNA1A-236ENST00000637117 YBX3P16989 372 aaKnown RBP eCLIP12.98□□□□□ -0.33
CACNA1A-236ENST00000637117 COL23A1Q86Y22 540 aaPredicted RBP12.98□□□□□ -0.33
CACNA1A-236ENST00000637117 CCNL1Q9UK58 526 aaPredicted RBP12.98□□□□□ -0.33
CACNA1A-236ENST00000637117 QSER1Q2KHR3 1735 aa12.97□□□□□ -0.33
CACNA1A-236ENST00000637117 FBLN1P23142 703 aa12.97□□□□□ -0.33
CACNA1A-236ENST00000637117 PDE4AP27815 886 aa12.97□□□□□ -0.33
CACNA1A-236ENST00000637117 AMPHP49418 695 aa12.97□□□□□ -0.33
CACNA1A-236ENST00000637117 PUS7Q96PZ0 661 aaKnown RBP12.97□□□□□ -0.33
CACNA1A-236ENST00000637117 CRISPLD2Q9H0B8 497 aa12.97□□□□□ -0.33
CACNA1A-236ENST00000637117 COL24A1Q17RW2 1714 aa12.96□□□□□ -0.33
CACNA1A-236ENST00000637117 HOXC9P31274 260 aa12.96□□□□□ -0.33
CACNA1A-236ENST00000637117 MFSD10Q14728 455 aa12.96□□□□□ -0.33
CACNA1A-236ENST00000637117 A0A1W2PP64 1363 aa12.95□□□□□ -0.34
CACNA1A-236ENST00000637117 NSD2O96028 1365 aa12.95□□□□□ -0.34
CACNA1A-236ENST00000637117 MAP3K19Q56UN5 1328 aa12.95□□□□□ -0.34
CACNA1A-236ENST00000637117 COG3Q96JB2 828 aa12.95□□□□□ -0.34
CACNA1A-236ENST00000637117 GOLGB1Q14789 3259 aaKnown RBP12.95□□□□□ -0.34
CACNA1A-236ENST00000637117 TIE1P35590 1138 aa12.94□□□□□ -0.34
CACNA1A-236ENST00000637117 MSL1Q68DK7 614 aa12.94□□□□□ -0.34
CACNA1A-236ENST00000637117 DDX27Q96GQ7 796 aaKnown RBP12.94□□□□□ -0.34
CACNA1A-236ENST00000637117 USP47Q96K76 1375 aa12.94□□□□□ -0.34
CACNA1A-236ENST00000637117 TUBGCP6Q96RT7 1819 aa12.93□□□□□ -0.34
CACNA1A-236ENST00000637117 SEMA3EO15041 775 aa12.93□□□□□ -0.34
CACNA1A-236ENST00000637117 SHANK3Q9BYB0 1731 aa12.93□□□□□ -0.34
CACNA1A-236ENST00000637117 TESPA1A2RU30 521 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-236ENST00000637117 LY75O60449 1722 aa12.92□□□□□ -0.34
CACNA1A-236ENST00000637117 HMGB2P26583 209 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-236ENST00000637117 NBPF6Q5VWK0 638 aa12.92□□□□□ -0.34
CACNA1A-236ENST00000637117 NBPF4Q96M43 638 aa12.92□□□□□ -0.34
CACNA1A-236ENST00000637117 CD2APQ9Y5K6 639 aa12.92□□□□□ -0.34
CACNA1A-236ENST00000637117 TTLL13PA6NNM8 815 aa12.91□□□□□ -0.34
CACNA1A-236ENST00000637117 FLAD1Q8NFF5 587 aa12.91□□□□□ -0.34
CACNA1A-236ENST00000637117 DOT1LQ8TEK3 1739 aa12.91□□□□□ -0.34
CACNA1A-236ENST00000637117 CGNL1Q0VF96 1302 aa12.9□□□□□ -0.34
CACNA1A-236ENST00000637117 FAM208AQ9UK61 1670 aaKnown RBP12.9□□□□□ -0.34
CACNA1A-236ENST00000637117 ATP10DQ9P241 1426 aa12.9□□□□□ -0.34
CACNA1A-236ENST00000637117 MEGF6O75095 1541 aa12.9□□□□□ -0.34
CACNA1A-236ENST00000637117 TATP17735 454 aaPredicted RBP12.9□□□□□ -0.34
CACNA1A-236ENST00000637117 RRS1Q15050 365 aaKnown RBP12.9□□□□□ -0.34
CACNA1A-236ENST00000637117 USHBP1Q8N6Y0 703 aa12.9□□□□□ -0.34
CACNA1A-236ENST00000637117 RAPGEF4Q8WZA2 1011 aa12.9□□□□□ -0.34
CACNA1A-236ENST00000637117 GPBP1L1Q9HC44 474 aaPredicted RBP12.9□□□□□ -0.34
CACNA1A-236ENST00000637117 MPRIPQ6WCQ1 1025 aa12.89□□□□□ -0.35
CACNA1A-236ENST00000637117 RGPD2P0DJD1 1756 aa12.89□□□□□ -0.35
CACNA1A-236ENST00000637117 ZNF526Q8TF50 670 aaPredicted RBP12.88□□□□□ -0.35
CACNA1A-236ENST00000637117 TESK2Q96S53 571 aa12.88□□□□□ -0.35
CACNA1A-236ENST00000637117 ST20-MTHFSA0A0A6YYL1 179 aa12.87□□□□□ -0.35
CACNA1A-236ENST00000637117 FYB1O15117 783 aa12.87□□□□□ -0.35
CACNA1A-236ENST00000637117 HSPA6P17066 643 aa12.87□□□□□ -0.35
CACNA1A-236ENST00000637117 BMP2KQ9NSY1 1161 aaPredicted RBP12.87□□□□□ -0.35
CACNA1A-236ENST00000637117 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.87□□□□□ -0.35
CACNA1A-236ENST00000637117 PALLDQ8WX93 1383 aa12.86□□□□□ -0.35
CACNA1A-236ENST00000637117 CEP350Q5VT06 3117 aa12.86□□□□□ -0.35
CACNA1A-236ENST00000637117 SMARCC1Q92922 1105 aaPredicted RBP12.86□□□□□ -0.35
CACNA1A-236ENST00000637117 AK7Q96M32 723 aa12.86□□□□□ -0.35
CACNA1A-236ENST00000637117 GGNBP2Q9H3C7 697 aa12.86□□□□□ -0.35
CACNA1A-236ENST00000637117 PCDH11XQ9BZA7 1347 aa12.86□□□□□ -0.35
CACNA1A-236ENST00000637117 PCDH11YQ9BZA8 1340 aa12.86□□□□□ -0.35
CACNA1A-236ENST00000637117 RTL1A6NKG5 1358 aa12.85□□□□□ -0.35
CACNA1A-236ENST00000637117 HSP90AB2PQ58FF8 381 aa12.85□□□□□ -0.35
CACNA1A-236ENST00000637117 WWC3Q9ULE0 1092 aa12.85□□□□□ -0.35
CACNA1A-236ENST00000637117 ARIH1Q9Y4X5 557 aaPredicted RBP12.85□□□□□ -0.35
CACNA1A-236ENST00000637117 CYP27B1O15528 508 aa12.84□□□□□ -0.35
CACNA1A-236ENST00000637117 PHF14O94880 888 aa12.84□□□□□ -0.35
CACNA1A-236ENST00000637117 CAMK2BQ13554 666 aa12.84□□□□□ -0.35
CACNA1A-236ENST00000637117 SMIM5Q71RC9 77 aa12.84□□□□□ -0.35
CACNA1A-236ENST00000637117 AMIGO3Q86WK7 504 aa12.84□□□□□ -0.35
CACNA1A-236ENST00000637117 ZC3H15Q8WU90 426 aaKnown RBP12.84□□□□□ -0.35
CACNA1A-236ENST00000637117 SMG6Q86US8 1419 aaKnown RBP12.84□□□□□ -0.35
CACNA1A-236ENST00000637117 IGSF1Q8N6C5 1336 aa12.84□□□□□ -0.35
CACNA1A-236ENST00000637117 ADCY9O60503 1353 aa12.83□□□□□ -0.36
CACNA1A-236ENST00000637117 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.83□□□□□ -0.36
CACNA1A-236ENST00000637117 PIGBQ92521 554 aa12.83□□□□□ -0.36
CACNA1A-236ENST00000637117 TRIM35Q9UPQ4 493 aa12.83□□□□□ -0.36
CACNA1A-236ENST00000637117 C5P01031 1676 aa12.83□□□□□ -0.36
CACNA1A-236ENST00000637117 INSRP06213 1382 aa12.82□□□□□ -0.36
CACNA1A-236ENST00000637117 TONSLQ96HA7 1378 aa12.82□□□□□ -0.36
CACNA1A-236ENST00000637117 GALR2O43603 387 aaPredicted RBP12.82□□□□□ -0.36
CACNA1A-236ENST00000637117 TAF1LQ8IZX4 1826 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms