RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 MINK1Q8N4C8 1332 aaPredicted RBP18.87■□□□□ 0.61
CACNA1A-235ENST00000637004 SMARCA5O60264 1052 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-235ENST00000637004 OSBPL3Q9H4L5 887 aa18.86■□□□□ 0.61
CACNA1A-235ENST00000637004 PRDM10Q9NQV6 1147 aa18.86■□□□□ 0.61
CACNA1A-235ENST00000637004 HMMRO75330 724 aa18.85■□□□□ 0.61
CACNA1A-235ENST00000637004 ANAPC15P60006 121 aa18.85■□□□□ 0.61
CACNA1A-235ENST00000637004 TMEM131LA2VDJ0 1609 aa18.85■□□□□ 0.61
CACNA1A-235ENST00000637004 APBB1O00213 710 aa18.84■□□□□ 0.61
CACNA1A-235ENST00000637004 ZSCAN20P17040 1043 aaPredicted RBP18.84■□□□□ 0.61
CACNA1A-235ENST00000637004 PRAM1Q96QH2 718 aa18.84■□□□□ 0.61
CACNA1A-235ENST00000637004 KIF3AQ9Y496 699 aa18.84■□□□□ 0.61
CACNA1A-235ENST00000637004 LETM1O95202 739 aaPredicted RBP18.83■□□□□ 0.61
CACNA1A-235ENST00000637004 RTL1A6NKG5 1358 aa18.83■□□□□ 0.61
CACNA1A-235ENST00000637004 UBR1Q8IWV7 1749 aa18.83■□□□□ 0.6
CACNA1A-235ENST00000637004 WDR33Q9C0J8 1336 aaKnown RBP18.83■□□□□ 0.6
CACNA1A-235ENST00000637004 CPSF1Q10570 1443 aaKnown RBP18.83■□□□□ 0.6
CACNA1A-235ENST00000637004 GTPBP4Q9BZE4 634 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-235ENST00000637004 SPTLC3Q9NUV7 552 aa18.82■□□□□ 0.6
CACNA1A-235ENST00000637004 CABP1Q9NZU7 370 aa18.82■□□□□ 0.6
CACNA1A-235ENST00000637004 YTHDC2Q9H6S0 1430 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-235ENST00000637004 PDE1AP54750 535 aa18.82■□□□□ 0.6
CACNA1A-235ENST00000637004 IL13P35225 146 aa18.82■□□□□ 0.6
CACNA1A-235ENST00000637004 ZNF710Q8N1W2 664 aa18.82■□□□□ 0.6
CACNA1A-235ENST00000637004 USP25Q9UHP3 1055 aa18.82■□□□□ 0.6
CACNA1A-235ENST00000637004 FKBP5Q13451 457 aaPredicted RBP18.81■□□□□ 0.6
CACNA1A-235ENST00000637004 CCDC183Q5T5S1 534 aa18.81■□□□□ 0.6
CACNA1A-235ENST00000637004 PTPRCP08575 1304 aa18.81■□□□□ 0.6
CACNA1A-235ENST00000637004 KIF20BQ96Q89 1820 aa18.81■□□□□ 0.6
CACNA1A-235ENST00000637004 CDK19Q9BWU1 502 aa18.81■□□□□ 0.6
CACNA1A-235ENST00000637004 ZHX1Q9UKY1 873 aaPredicted RBP18.81■□□□□ 0.6
CACNA1A-235ENST00000637004 ADCY5O95622 1261 aa18.8■□□□□ 0.6
CACNA1A-235ENST00000637004 USP48Q86UV5 1035 aa18.8■□□□□ 0.6
CACNA1A-235ENST00000637004 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.8■□□□□ 0.6
CACNA1A-235ENST00000637004 KLHL34Q8N239 644 aa18.8■□□□□ 0.6
CACNA1A-235ENST00000637004 ESYT1Q9BSJ8 1104 aa18.8■□□□□ 0.6
CACNA1A-235ENST00000637004 TMEM87AQ8NBN3 555 aa18.79■□□□□ 0.6
CACNA1A-235ENST00000637004 ZNF830Q96NB3 372 aaPredicted RBP18.79■□□□□ 0.6
CACNA1A-235ENST00000637004 MSH6P52701 1360 aa18.79■□□□□ 0.6
CACNA1A-235ENST00000637004 GADD45BO75293 160 aaPredicted RBP18.79■□□□□ 0.6
CACNA1A-235ENST00000637004 RGS12O14924 1447 aa18.79■□□□□ 0.6
CACNA1A-235ENST00000637004 MEIS3Q99687 375 aa18.78■□□□□ 0.6
CACNA1A-235ENST00000637004 TTC12Q9H892 705 aaPredicted RBP18.78■□□□□ 0.6
CACNA1A-235ENST00000637004 ZBTB7CA1YPR0 619 aa18.78■□□□□ 0.6
CACNA1A-235ENST00000637004 FBLN1P23142 703 aa18.78■□□□□ 0.6
CACNA1A-235ENST00000637004 HDGFP51858 240 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-235ENST00000637004 DIAPH3Q9NSV4 1193 aa18.78■□□□□ 0.6
CACNA1A-235ENST00000637004 IL17RAQ96F46 866 aa18.78■□□□□ 0.6
CACNA1A-235ENST00000637004 ZNF335Q9H4Z2 1342 aaPredicted RBP18.77■□□□□ 0.6
CACNA1A-235ENST00000637004 SSH2Q76I76 1423 aa18.77■□□□□ 0.6
CACNA1A-235ENST00000637004 KIF20AO95235 890 aa18.77■□□□□ 0.6
CACNA1A-235ENST00000637004 TPM3P06753 285 aa18.77■□□□□ 0.6
CACNA1A-235ENST00000637004 MX1P20591 662 aa18.77■□□□□ 0.6
CACNA1A-235ENST00000637004 CHAF1AQ13111 956 aaPredicted RBP18.77■□□□□ 0.6
CACNA1A-235ENST00000637004 PPP4R3BQ5MIZ7 849 aa18.77■□□□□ 0.6
CACNA1A-235ENST00000637004 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.77■□□□□ 0.6
CACNA1A-235ENST00000637004 GDPD2Q9HCC8 539 aa18.77■□□□□ 0.6
CACNA1A-235ENST00000637004 FAM83GA6ND36 823 aa18.76■□□□□ 0.59
CACNA1A-235ENST00000637004 TSC1Q92574 1164 aa18.76■□□□□ 0.59
CACNA1A-235ENST00000637004 ANO2Q9NQ90 1003 aa18.76■□□□□ 0.59
CACNA1A-235ENST00000637004 EMILIN1Q9Y6C2 1016 aa18.76■□□□□ 0.59
CACNA1A-235ENST00000637004 CDK12Q9NYV4 1490 aaPredicted RBP18.76■□□□□ 0.59
CACNA1A-235ENST00000637004 CBX1P83916 185 aa18.76■□□□□ 0.59
CACNA1A-235ENST00000637004 NOL8Q76FK4 1167 aaKnown RBP18.76■□□□□ 0.59
CACNA1A-235ENST00000637004 MPNDQ8N594 471 aa18.76■□□□□ 0.59
CACNA1A-235ENST00000637004 KDM4AO75164 1064 aa18.75■□□□□ 0.59
CACNA1A-235ENST00000637004 PALD1Q9ULE6 856 aa18.75■□□□□ 0.59
CACNA1A-235ENST00000637004 FOXD4L6Q3SYB3 417 aaPredicted RBP18.75■□□□□ 0.59
CACNA1A-235ENST00000637004 TAF7LQ5H9L4 462 aa18.75■□□□□ 0.59
CACNA1A-235ENST00000637004 FOXD4L3Q6VB84 417 aaPredicted RBP18.75■□□□□ 0.59
CACNA1A-235ENST00000637004 JARID2Q92833 1246 aaPredicted RBP18.75■□□□□ 0.59
CACNA1A-235ENST00000637004 HCLS1P14317 486 aaPredicted RBP18.74■□□□□ 0.59
CACNA1A-235ENST00000637004 ATP7BP35670 1465 aa18.74■□□□□ 0.59
CACNA1A-235ENST00000637004 KIAA0232Q92628 1395 aa18.74■□□□□ 0.59
CACNA1A-235ENST00000637004 EPB41L2O43491 1005 aaKnown RBP18.74■□□□□ 0.59
CACNA1A-235ENST00000637004 UBE2HP62256 183 aa18.74■□□□□ 0.59
CACNA1A-235ENST00000637004 BCL2L12Q9HB09 334 aa18.74■□□□□ 0.59
CACNA1A-235ENST00000637004 METP08581 1390 aa18.74■□□□□ 0.59
CACNA1A-235ENST00000637004 DCTN1Q14203 1278 aa18.73■□□□□ 0.59
CACNA1A-235ENST00000637004 PDCL2Q8N4E4 241 aa18.73■□□□□ 0.59
CACNA1A-235ENST00000637004 NPHP4O75161 1426 aaPredicted RBP18.73■□□□□ 0.59
CACNA1A-235ENST00000637004 CHMLP26374 656 aa18.73■□□□□ 0.59
CACNA1A-235ENST00000637004 C17orf53Q8N3J3 647 aaPredicted RBP18.73■□□□□ 0.59
CACNA1A-235ENST00000637004 AATKQ6ZMQ8 1374 aa18.72■□□□□ 0.59
CACNA1A-235ENST00000637004 SRCIN1Q9C0H9 1055 aa18.72■□□□□ 0.59
CACNA1A-235ENST00000637004 ARHGAP23Q9P227 1491 aa18.72■□□□□ 0.59
CACNA1A-235ENST00000637004 CHL1O00533 1208 aa18.72■□□□□ 0.59
CACNA1A-235ENST00000637004 KRT24Q2M2I5 525 aa18.72■□□□□ 0.59
CACNA1A-235ENST00000637004 KIAA1524Q8TCG1 905 aa18.72■□□□□ 0.59
CACNA1A-235ENST00000637004 ATP6V1DQ9Y5K8 247 aa18.72■□□□□ 0.59
CACNA1A-235ENST00000637004 ZNF142P52746 1687 aaPredicted RBP18.72■□□□□ 0.59
CACNA1A-235ENST00000637004 UPF3BQ9BZI7 483 aaKnown RBP18.71■□□□□ 0.59
CACNA1A-235ENST00000637004 GOLGA6L6A8MZA4 724 aa18.71■□□□□ 0.59
CACNA1A-235ENST00000637004 CCT4P50991 539 aaKnown RBP18.71■□□□□ 0.59
CACNA1A-235ENST00000637004 ATP2B3Q16720 1220 aa18.71■□□□□ 0.59
CACNA1A-235ENST00000637004 LRRCC1Q9C099 1032 aa18.71■□□□□ 0.59
CACNA1A-235ENST00000637004 SALL3Q9BXA9 1300 aa18.71■□□□□ 0.58
CACNA1A-235ENST00000637004 SLIT1O75093 1534 aa18.7■□□□□ 0.58
CACNA1A-235ENST00000637004 RPAP1Q9BWH6 1393 aaPredicted RBP18.7■□□□□ 0.58
CACNA1A-235ENST00000637004 MAP2P11137 1827 aaKnown RBP18.7■□□□□ 0.58
CACNA1A-235ENST00000637004 STRCQ7RTU9 1775 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms