RNA–Protein interactions for RNA: ENST00000636957.1

CHRNA7-222, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 622 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-222ENST00000636957 PITPNM1O00562 1244 aa11.97□□□□□ -0.49
CHRNA7-222ENST00000636957 RREB1Q92766 1687 aa11.97□□□□□ -0.49
CHRNA7-222ENST00000636957 PAPPAQ13219 1627 aa11.97□□□□□ -0.49
CHRNA7-222ENST00000636957 TRIM37O94972 964 aa11.96□□□□□ -0.49
CHRNA7-222ENST00000636957 CCDC125Q86Z20 511 aa11.96□□□□□ -0.49
CHRNA7-222ENST00000636957 RUNDC1Q96C34 613 aa11.96□□□□□ -0.49
CHRNA7-222ENST00000636957 DCAF5Q96JK2 942 aa11.96□□□□□ -0.49
CHRNA7-222ENST00000636957 MIER1Q8N108 512 aa11.95□□□□□ -0.5
CHRNA7-222ENST00000636957 UPF1Q92900 1129 aaKnown RBP eCLIP11.95□□□□□ -0.5
CHRNA7-222ENST00000636957 ACSBG1Q96GR2 724 aa11.95□□□□□ -0.5
CHRNA7-222ENST00000636957 BCL11BQ9C0K0 894 aaPredicted RBP11.95□□□□□ -0.5
CHRNA7-222ENST00000636957 TAF1LQ8IZX4 1826 aa11.95□□□□□ -0.5
CHRNA7-222ENST00000636957 UBR2Q8IWV8 1755 aa11.95□□□□□ -0.5
CHRNA7-222ENST00000636957 GNAT3A8MTJ3 354 aa11.94□□□□□ -0.5
CHRNA7-222ENST00000636957 ERVV-2B6SEH9 535 aa11.94□□□□□ -0.5
CHRNA7-222ENST00000636957 SOCS7O14512 581 aa11.94□□□□□ -0.5
CHRNA7-222ENST00000636957 KCNQ2O43526 872 aa11.94□□□□□ -0.5
CHRNA7-222ENST00000636957 SF3B2Q13435 895 aaKnown RBP11.94□□□□□ -0.5
CHRNA7-222ENST00000636957 NFE2L2Q16236 605 aa11.94□□□□□ -0.5
CHRNA7-222ENST00000636957 MPRIPQ6WCQ1 1025 aa11.94□□□□□ -0.5
CHRNA7-222ENST00000636957 CCDC146Q8IYE0 955 aa11.94□□□□□ -0.5
CHRNA7-222ENST00000636957 NUP188Q5SRE5 1749 aa11.94□□□□□ -0.5
CHRNA7-222ENST00000636957 ZNF831Q5JPB2 1677 aa11.94□□□□□ -0.5
CHRNA7-222ENST00000636957 KDM3BQ7LBC6 1761 aa11.93□□□□□ -0.5
CHRNA7-222ENST00000636957 PRIM1P49642 420 aaKnown RBP11.93□□□□□ -0.5
CHRNA7-222ENST00000636957 SYTL4Q96C24 671 aaPredicted RBP11.93□□□□□ -0.5
CHRNA7-222ENST00000636957 CEMIPQ8WUJ3 1361 aa11.92□□□□□ -0.5
CHRNA7-222ENST00000636957 RNMTO43148 476 aaKnown RBP11.92□□□□□ -0.5
CHRNA7-222ENST00000636957 HTATSF1O43719 755 aaKnown RBP11.92□□□□□ -0.5
CHRNA7-222ENST00000636957 FAM9BQ8IZU0 186 aa11.92□□□□□ -0.5
CHRNA7-222ENST00000636957 RTF1Q92541 710 aaKnown RBP11.92□□□□□ -0.5
CHRNA7-222ENST00000636957 CICQ96RK0 1608 aaPredicted RBP11.92□□□□□ -0.5
CHRNA7-222ENST00000636957 C5P01031 1676 aa11.91□□□□□ -0.5
CHRNA7-222ENST00000636957 TMPOP42166 694 aaKnown RBP11.91□□□□□ -0.5
CHRNA7-222ENST00000636957 BAG6P46379 1132 aa11.91□□□□□ -0.5
CHRNA7-222ENST00000636957 PTF1AQ7RTS3 328 aa11.91□□□□□ -0.5
CHRNA7-222ENST00000636957 LGR6Q9HBX8 967 aa11.91□□□□□ -0.5
CHRNA7-222ENST00000636957 TMOD3Q9NYL9 352 aa11.91□□□□□ -0.5
CHRNA7-222ENST00000636957 APBA3O96018 575 aa11.9□□□□□ -0.5
CHRNA7-222ENST00000636957 COL5A3P25940 1745 aaPredicted RBP11.9□□□□□ -0.5
CHRNA7-222ENST00000636957 RIPK4P57078 832 aa11.9□□□□□ -0.5
CHRNA7-222ENST00000636957 CABP4P57796 275 aa11.9□□□□□ -0.5
CHRNA7-222ENST00000636957 LMOD3Q0VAK6 560 aa11.9□□□□□ -0.5
CHRNA7-222ENST00000636957 IL17REQ8NFR9 667 aa11.9□□□□□ -0.5
CHRNA7-222ENST00000636957 SLC52A2Q9HAB3 445 aa11.9□□□□□ -0.5
CHRNA7-222ENST00000636957 APAF1O14727 1248 aa11.89□□□□□ -0.51
CHRNA7-222ENST00000636957 PLSCR1O15162 318 aa11.89□□□□□ -0.51
CHRNA7-222ENST00000636957 FXR2P51116 673 aaKnown RBP eCLIP11.89□□□□□ -0.51
CHRNA7-222ENST00000636957 TEFQ10587 303 aa11.89□□□□□ -0.51
CHRNA7-222ENST00000636957 PIGBQ92521 554 aa11.89□□□□□ -0.51
CHRNA7-222ENST00000636957 TJP1Q07157 1748 aa11.89□□□□□ -0.51
CHRNA7-222ENST00000636957 NEUROD2Q15784 382 aa11.88□□□□□ -0.51
CHRNA7-222ENST00000636957 MCM10Q7L590 875 aa11.88□□□□□ -0.51
CHRNA7-222ENST00000636957 NFATC2IPQ8NCF5 419 aa11.88□□□□□ -0.51
CHRNA7-222ENST00000636957 RRP7AQ9Y3A4 280 aaKnown RBP11.88□□□□□ -0.51
CHRNA7-222ENST00000636957 QSER1Q2KHR3 1735 aa11.87□□□□□ -0.51
CHRNA7-222ENST00000636957 DCTN1Q14203 1278 aa11.87□□□□□ -0.51
CHRNA7-222ENST00000636957 DEFB132Q7Z7B7 95 aa11.87□□□□□ -0.51
CHRNA7-222ENST00000636957 SMARCC1Q92922 1105 aaPredicted RBP11.87□□□□□ -0.51
CHRNA7-222ENST00000636957 TUBGCP6Q96RT7 1819 aa11.87□□□□□ -0.51
CHRNA7-222ENST00000636957 PALLDQ8WX93 1383 aa11.87□□□□□ -0.51
CHRNA7-222ENST00000636957 LAMB4A4D0S4 1761 aa11.87□□□□□ -0.51
CHRNA7-222ENST00000636957 KCPQ6ZWJ8 1503 aa11.86□□□□□ -0.51
CHRNA7-222ENST00000636957 EN1Q05925 392 aaPredicted RBP11.86□□□□□ -0.51
CHRNA7-222ENST00000636957 CAMKK2Q96RR4 588 aa11.86□□□□□ -0.51
CHRNA7-222ENST00000636957 TRIM35Q9UPQ4 493 aa11.86□□□□□ -0.51
CHRNA7-222ENST00000636957 NGEFQ8N5V2 710 aa11.85□□□□□ -0.51
CHRNA7-222ENST00000636957 ATG3Q9NT62 314 aa11.85□□□□□ -0.51
CHRNA7-222ENST00000636957 ASAP1Q9ULH1 1129 aa11.85□□□□□ -0.51
CHRNA7-222ENST00000636957 MYH14Q7Z406 1995 aaKnown RBP11.85□□□□□ -0.51
CHRNA7-222ENST00000636957 UBR3Q6ZT12 1888 aa11.85□□□□□ -0.51
CHRNA7-222ENST00000636957 C4BP0C0L5 1744 aa11.84□□□□□ -0.51
CHRNA7-222ENST00000636957 EZH2Q15910 746 aaKnown RBP11.84□□□□□ -0.51
CHRNA7-222ENST00000636957 TXNRD1Q16881 649 aa11.84□□□□□ -0.51
CHRNA7-222ENST00000636957 CCDC27Q2M243 656 aa11.84□□□□□ -0.51
CHRNA7-222ENST00000636957 THUMPD2Q9BTF0 503 aaKnown RBP11.84□□□□□ -0.51
CHRNA7-222ENST00000636957 BTBD11A6QL63 1104 aa11.83□□□□□ -0.52
CHRNA7-222ENST00000636957 CALD1Q05682 793 aaKnown RBP11.83□□□□□ -0.52
CHRNA7-222ENST00000636957 TAF7Q15545 349 aaPredicted RBP11.83□□□□□ -0.52
CHRNA7-222ENST00000636957 SLC27A3Q5K4L6 730 aa11.83□□□□□ -0.52
CHRNA7-222ENST00000636957 LOC102724428A0A0B4J2F2 783 aa11.82□□□□□ -0.52
CHRNA7-222ENST00000636957 SIK1P57059 783 aa11.82□□□□□ -0.52
CHRNA7-222ENST00000636957 SLC39A6Q13433 755 aa11.82□□□□□ -0.52
CHRNA7-222ENST00000636957 ZNF790Q6PG37 636 aa11.82□□□□□ -0.52
CHRNA7-222ENST00000636957 TTC5Q8N0Z6 440 aa11.82□□□□□ -0.52
CHRNA7-222ENST00000636957 PROM2Q8N271 834 aa11.82□□□□□ -0.52
CHRNA7-222ENST00000636957 BABAM1Q9NWV8 329 aa11.82□□□□□ -0.52
CHRNA7-222ENST00000636957 CCNL1Q9UK58 526 aaPredicted RBP11.82□□□□□ -0.52
CHRNA7-222ENST00000636957 HMGB2P26583 209 aaKnown RBP11.81□□□□□ -0.52
CHRNA7-222ENST00000636957 WWC1Q8IX03 1113 aa11.81□□□□□ -0.52
CHRNA7-222ENST00000636957 CACNA1FO60840 1977 aa11.8□□□□□ -0.52
CHRNA7-222ENST00000636957 SENP3-EIF4A1A0A087X0R7 540 aa11.8□□□□□ -0.52
CHRNA7-222ENST00000636957 PTCD1O75127 700 aaKnown RBP11.8□□□□□ -0.52
CHRNA7-222ENST00000636957 LRRC4BQ9NT99 713 aa11.8□□□□□ -0.52
CHRNA7-222ENST00000636957 HEG1Q9ULI3 1381 aa11.79□□□□□ -0.52
CHRNA7-222ENST00000636957 ATP6V1AP38606 617 aa11.79□□□□□ -0.52
CHRNA7-222ENST00000636957 VSIG10Q8N0Z9 540 aa11.79□□□□□ -0.52
CHRNA7-222ENST00000636957 ZNF496Q96IT1 587 aaPredicted RBP11.79□□□□□ -0.52
CHRNA7-222ENST00000636957 CFAP44Q96MT7 982 aa11.79□□□□□ -0.52
CHRNA7-222ENST00000636957 FMNL2Q96PY5 1086 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms