RNA–Protein interactions for RNA: ENST00000636559.1

SMARCA2-252, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2 BASIC

Gene SMARCA2, Length 6,853 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-252ENST00000636559 CCDC39Q9UFE4 941 aa9.17□□□□□ -0.94
SMARCA2-252ENST00000636559 TRMT112Q9UI30 125 aaKnown RBP9.17□□□□□ -0.94
SMARCA2-252ENST00000636559 LRRFIP2Q9Y608 721 aaKnown RBP9.17□□□□□ -0.94
SMARCA2-252ENST00000636559 FLIIQ13045 1269 aa9.16□□□□□ -0.94
SMARCA2-252ENST00000636559 FILIP1LQ4L180 1135 aa9.16□□□□□ -0.94
SMARCA2-252ENST00000636559 MAGEC2Q9UBF1 373 aaPredicted RBP9.16□□□□□ -0.94
SMARCA2-252ENST00000636559 MSH6P52701 1360 aa9.16□□□□□ -0.94
SMARCA2-252ENST00000636559 TTC21AQ8NDW8 1320 aa9.16□□□□□ -0.94
SMARCA2-252ENST00000636559 SMC2O95347 1197 aa9.16□□□□□ -0.94
SMARCA2-252ENST00000636559 RSPH6AQ9H0K4 717 aa9.16□□□□□ -0.94
SMARCA2-252ENST00000636559 RIMS2Q9UQ26 1411 aa9.16□□□□□ -0.94
SMARCA2-252ENST00000636559 BOLA2Q9H3K6 86 aa9.16□□□□□ -0.94
SMARCA2-252ENST00000636559 NOL7Q9UMY1 257 aaKnown RBP9.16□□□□□ -0.94
SMARCA2-252ENST00000636559 RALGAPBQ86X10 1494 aa9.16□□□□□ -0.94
SMARCA2-252ENST00000636559 TRAPPC8Q9Y2L5 1435 aa9.16□□□□□ -0.94
SMARCA2-252ENST00000636559 CASTP20810 708 aaKnown RBP9.16□□□□□ -0.94
SMARCA2-252ENST00000636559 TRIM27P14373 513 aa9.15□□□□□ -0.94
SMARCA2-252ENST00000636559 CNKSR2Q8WXI2 1034 aa9.15□□□□□ -0.94
SMARCA2-252ENST00000636559 A0A087WZG4 1122 aa9.15□□□□□ -0.94
SMARCA2-252ENST00000636559 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.15□□□□□ -0.94
SMARCA2-252ENST00000636559 TEX13AQ9BXU3 409 aaPredicted RBP9.15□□□□□ -0.94
SMARCA2-252ENST00000636559 PIP4K2AP48426 406 aaPredicted RBP9.15□□□□□ -0.94
SMARCA2-252ENST00000636559 TMEM132AQ24JP5 1023 aa9.15□□□□□ -0.94
SMARCA2-252ENST00000636559 U3KPZ7 1027 aaPredicted RBP9.15□□□□□ -0.94
SMARCA2-252ENST00000636559 NUP160Q12769 1436 aa9.15□□□□□ -0.94
SMARCA2-252ENST00000636559 ODF2Q5BJF6 829 aa9.15□□□□□ -0.94
SMARCA2-252ENST00000636559 MBIPQ9NS73 344 aa9.15□□□□□ -0.94
SMARCA2-252ENST00000636559 PPIP5K1Q6PFW1 1433 aa9.15□□□□□ -0.95
SMARCA2-252ENST00000636559 CHRNA2Q15822 529 aa9.15□□□□□ -0.95
SMARCA2-252ENST00000636559 FAM43AQ8N2R8 423 aa9.15□□□□□ -0.95
SMARCA2-252ENST00000636559 ANKIB1Q9P2G1 1089 aa9.15□□□□□ -0.95
SMARCA2-252ENST00000636559 FAM83GA6ND36 823 aa9.14□□□□□ -0.95
SMARCA2-252ENST00000636559 MNS1Q8NEH6 495 aa9.14□□□□□ -0.95
SMARCA2-252ENST00000636559 MAP3K2Q9Y2U5 619 aa9.14□□□□□ -0.95
SMARCA2-252ENST00000636559 TNMDQ9H2S6 317 aa9.14□□□□□ -0.95
SMARCA2-252ENST00000636559 FAM13BQ9NYF5 915 aa9.14□□□□□ -0.95
SMARCA2-252ENST00000636559 ABCC10Q5T3U5 1492 aa9.14□□□□□ -0.95
SMARCA2-252ENST00000636559 IL16Q14005 1332 aa9.14□□□□□ -0.95
SMARCA2-252ENST00000636559 WDR62O43379 1518 aa9.14□□□□□ -0.95
SMARCA2-252ENST00000636559 ANKRD18BA2A2Z9 1011 aa9.14□□□□□ -0.95
SMARCA2-252ENST00000636559 ZBTB3Q9H5J0 574 aa9.14□□□□□ -0.95
SMARCA2-252ENST00000636559 TMOD2Q9NZR1 351 aa9.14□□□□□ -0.95
SMARCA2-252ENST00000636559 WASF1Q92558 559 aa9.14□□□□□ -0.95
SMARCA2-252ENST00000636559 ASXL1Q8IXJ9 1541 aa9.14□□□□□ -0.95
SMARCA2-252ENST00000636559 CCDC192P0DO97 292 aa9.14□□□□□ -0.95
SMARCA2-252ENST00000636559 SLC5A1P13866 664 aa9.14□□□□□ -0.95
SMARCA2-252ENST00000636559 CCDC8Q9H0W5 538 aaPredicted RBP9.14□□□□□ -0.95
SMARCA2-252ENST00000636559 CFAP45Q9UL16 551 aa9.14□□□□□ -0.95
SMARCA2-252ENST00000636559 PRAG1Q86YV5 1406 aa9.14□□□□□ -0.95
SMARCA2-252ENST00000636559 FBLN1P23142 703 aa9.14□□□□□ -0.95
SMARCA2-252ENST00000636559 ZNF287Q9HBT7 754 aa9.14□□□□□ -0.95
SMARCA2-252ENST00000636559 KIF21AQ7Z4S6 1674 aa9.13□□□□□ -0.95
SMARCA2-252ENST00000636559 BRPF1P55201 1214 aaPredicted RBP9.13□□□□□ -0.95
SMARCA2-252ENST00000636559 HSP90AA2PQ14568 343 aaPredicted RBP9.13□□□□□ -0.95
SMARCA2-252ENST00000636559 SMARCE1Q969G3 411 aa9.13□□□□□ -0.95
SMARCA2-252ENST00000636559 SPATA32Q96LK8 384 aa9.13□□□□□ -0.95
SMARCA2-252ENST00000636559 GPTP24298 496 aa9.13□□□□□ -0.95
SMARCA2-252ENST00000636559 USP5P45974 858 aa9.13□□□□□ -0.95
SMARCA2-252ENST00000636559 PDIA4P13667 645 aaKnown RBP9.13□□□□□ -0.95
SMARCA2-252ENST00000636559 HSP90AB2PQ58FF8 381 aa9.13□□□□□ -0.95
SMARCA2-252ENST00000636559 PRPF40BQ6NWY9 871 aaKnown RBP9.13□□□□□ -0.95
SMARCA2-252ENST00000636559 CIZ1Q9ULV3 898 aaPredicted RBP9.13□□□□□ -0.95
SMARCA2-252ENST00000636559 PIK3R4Q99570 1358 aa9.13□□□□□ -0.95
SMARCA2-252ENST00000636559 MAP3K12Q12852 859 aa9.13□□□□□ -0.95
SMARCA2-252ENST00000636559 TNNT3P45378 269 aaPredicted RBP9.13□□□□□ -0.95
SMARCA2-252ENST00000636559 STIM1Q13586 685 aa9.13□□□□□ -0.95
SMARCA2-252ENST00000636559 DACH1Q9UI36 760 aa9.13□□□□□ -0.95
SMARCA2-252ENST00000636559 NPHP3Q7Z494 1330 aa9.12□□□□□ -0.95
SMARCA2-252ENST00000636559 SNRPA1P09661 255 aaKnown RBP9.12□□□□□ -0.95
SMARCA2-252ENST00000636559 RPGRQ92834 1020 aaKnown RBP9.12□□□□□ -0.95
SMARCA2-252ENST00000636559 EIF4G3O43432 1585 aaKnown RBP9.12□□□□□ -0.95
SMARCA2-252ENST00000636559 MINDY4BA8MYZ0 360 aa9.12□□□□□ -0.95
SMARCA2-252ENST00000636559 DZIP1Q86YF9 867 aaKnown RBP9.12□□□□□ -0.95
SMARCA2-252ENST00000636559 NAPBQ9H115 298 aa9.12□□□□□ -0.95
SMARCA2-252ENST00000636559 CWC25Q9NXE8 425 aaPredicted RBP9.12□□□□□ -0.95
SMARCA2-252ENST00000636559 TCOF1Q13428 1488 aaKnown RBP9.12□□□□□ -0.95
SMARCA2-252ENST00000636559 WWC2Q6AWC2 1192 aa9.12□□□□□ -0.95
SMARCA2-252ENST00000636559 EIF2AK4Q9P2K8 1649 aaKnown RBP9.12□□□□□ -0.95
SMARCA2-252ENST00000636559 POLR3DP05423 398 aaPredicted RBP9.12□□□□□ -0.95
SMARCA2-252ENST00000636559 ZFYVE27Q5T4F4 411 aa9.12□□□□□ -0.95
SMARCA2-252ENST00000636559 ZHX3Q9H4I2 956 aa9.12□□□□□ -0.95
SMARCA2-252ENST00000636559 PI4KAP2A4QPH2 592 aa9.12□□□□□ -0.95
SMARCA2-252ENST00000636559 MPHOSPH10O00566 681 aaKnown RBP9.12□□□□□ -0.95
SMARCA2-252ENST00000636559 SERPINC1P01008 464 aa9.12□□□□□ -0.95
SMARCA2-252ENST00000636559 PI4KAP1Q8N8J0 262 aa9.12□□□□□ -0.95
SMARCA2-252ENST00000636559 PIBF1Q8WXW3 757 aa9.12□□□□□ -0.95
SMARCA2-252ENST00000636559 DDX11Q96FC9 970 aa9.12□□□□□ -0.95
SMARCA2-252ENST00000636559 CFAP43Q8NDM7 1665 aa9.11□□□□□ -0.95
SMARCA2-252ENST00000636559 TTLL5Q6EMB2 1281 aa9.11□□□□□ -0.95
SMARCA2-252ENST00000636559 ATP5J2-PTCD1G3V325 749 aa9.11□□□□□ -0.95
SMARCA2-252ENST00000636559 MKNK2Q9HBH9 465 aa9.11□□□□□ -0.95
SMARCA2-252ENST00000636559 ARGLU1Q9NWB6 273 aaPredicted RBP9.11□□□□□ -0.95
SMARCA2-252ENST00000636559 MAPKBP1O60336 1514 aa9.11□□□□□ -0.95
SMARCA2-252ENST00000636559 CCDC173Q0VFZ6 552 aa9.11□□□□□ -0.95
SMARCA2-252ENST00000636559 CAGE1Q8TC20 777 aa9.11□□□□□ -0.95
SMARCA2-252ENST00000636559 RUFY1Q96T51 708 aa9.1□□□□□ -0.95
SMARCA2-252ENST00000636559 UPF3BQ9BZI7 483 aaKnown RBP9.1□□□□□ -0.95
SMARCA2-252ENST00000636559 UBE3BQ7Z3V4 1068 aa9.1□□□□□ -0.95
SMARCA2-252ENST00000636559 CRACR2BQ8N4Y2 399 aaPredicted RBP9.1□□□□□ -0.95
SMARCA2-252ENST00000636559 ZCRB1Q8TBF4 217 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms