RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 GLRX3O76003 335 aaKnown RBP5.54□□□□□ -1.52
SCN1A-210ENST00000635776 MX1P20591 662 aa5.54□□□□□ -1.52
SCN1A-210ENST00000635776 TICAM2Q86XR7 235 aa5.54□□□□□ -1.52
SCN1A-210ENST00000635776 AEBP1Q8IUX7 1158 aa5.54□□□□□ -1.52
SCN1A-210ENST00000635776 SURF6O75683 361 aaKnown RBP5.54□□□□□ -1.52
SCN1A-210ENST00000635776 GCP02774 474 aa5.54□□□□□ -1.52
SCN1A-210ENST00000635776 EIF2S2P20042 333 aaKnown RBP5.54□□□□□ -1.52
SCN1A-210ENST00000635776 TEX13AQ9BXU3 409 aaPredicted RBP5.54□□□□□ -1.52
SCN1A-210ENST00000635776 HMGB2P26583 209 aaKnown RBP5.54□□□□□ -1.52
SCN1A-210ENST00000635776 CEP85Q6P2H3 762 aa5.54□□□□□ -1.52
SCN1A-210ENST00000635776 ZRANB1Q9UGI0 708 aa5.54□□□□□ -1.52
SCN1A-210ENST00000635776 KLHL34Q8N239 644 aa5.54□□□□□ -1.52
SCN1A-210ENST00000635776 ERBB4Q15303 1308 aa5.53□□□□□ -1.52
SCN1A-210ENST00000635776 FAM83GA6ND36 823 aa5.53□□□□□ -1.52
SCN1A-210ENST00000635776 PSMA5P28066 241 aa5.53□□□□□ -1.52
SCN1A-210ENST00000635776 DCTN1Q14203 1278 aa5.53□□□□□ -1.52
SCN1A-210ENST00000635776 TSPYL6Q8N831 410 aa5.53□□□□□ -1.52
SCN1A-210ENST00000635776 TTC41PQ6P2S7 1318 aa5.53□□□□□ -1.52
SCN1A-210ENST00000635776 MBD3O95983 291 aa5.53□□□□□ -1.52
SCN1A-210ENST00000635776 KNDC1Q76NI1 1749 aa5.53□□□□□ -1.52
SCN1A-210ENST00000635776 RIC3Q7Z5B4 369 aa5.53□□□□□ -1.52
SCN1A-210ENST00000635776 OSBPL3Q9H4L5 887 aa5.53□□□□□ -1.52
SCN1A-210ENST00000635776 SSH2Q76I76 1423 aa5.53□□□□□ -1.52
SCN1A-210ENST00000635776 ANKRD24Q8TF21 1146 aa5.53□□□□□ -1.52
SCN1A-210ENST00000635776 APBB1O00213 710 aa5.53□□□□□ -1.52
SCN1A-210ENST00000635776 MRE11P49959 708 aa5.53□□□□□ -1.52
SCN1A-210ENST00000635776 ZSCAN31Q96LW9 406 aaPredicted RBP5.53□□□□□ -1.52
SCN1A-210ENST00000635776 TBC1D2Q9BYX2 928 aa5.53□□□□□ -1.52
SCN1A-210ENST00000635776 KSR2Q6VAB6 950 aa5.52□□□□□ -1.53
SCN1A-210ENST00000635776 LINS1Q8NG48 757 aa5.52□□□□□ -1.53
SCN1A-210ENST00000635776 ANKRD1Q15327 319 aa5.52□□□□□ -1.53
SCN1A-210ENST00000635776 ANO2Q9NQ90 1003 aa5.52□□□□□ -1.53
SCN1A-210ENST00000635776 RILPL2Q969X0 211 aa5.52□□□□□ -1.53
SCN1A-210ENST00000635776 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.52□□□□□ -1.53
SCN1A-210ENST00000635776 SIGLEC1Q9BZZ2 1709 aa5.52□□□□□ -1.53
SCN1A-210ENST00000635776 SRGAP3O43295 1099 aa5.52□□□□□ -1.53
SCN1A-210ENST00000635776 DCAF5Q96JK2 942 aa5.52□□□□□ -1.53
SCN1A-210ENST00000635776 FMNL2Q96PY5 1086 aa5.52□□□□□ -1.53
SCN1A-210ENST00000635776 C1orf115Q9H7X2 142 aa5.52□□□□□ -1.53
SCN1A-210ENST00000635776 MCM4P33991 863 aa5.52□□□□□ -1.53
SCN1A-210ENST00000635776 RAD50Q92878 1312 aa5.52□□□□□ -1.53
SCN1A-210ENST00000635776 NUTM2GQ5VZR2 741 aa5.52□□□□□ -1.53
SCN1A-210ENST00000635776 NCKAP5LQ9HCH0 1330 aa5.52□□□□□ -1.53
SCN1A-210ENST00000635776 FOXO3O43524 673 aa5.52□□□□□ -1.53
SCN1A-210ENST00000635776 TBC1D9Q6ZT07 1266 aa5.52□□□□□ -1.53
SCN1A-210ENST00000635776 OVOS2A0A0G2JMS6 1433 aa5.51□□□□□ -1.53
SCN1A-210ENST00000635776 KRT32Q14532 448 aa5.51□□□□□ -1.53
SCN1A-210ENST00000635776 PXDNLA1KZ92 1463 aa5.51□□□□□ -1.53
SCN1A-210ENST00000635776 SNRPA1P09661 255 aaKnown RBP5.51□□□□□ -1.53
SCN1A-210ENST00000635776 DDX21Q9NR30 783 aaKnown RBP eCLIP5.51□□□□□ -1.53
SCN1A-210ENST00000635776 PDCP20941 246 aa5.51□□□□□ -1.53
SCN1A-210ENST00000635776 SLC4A3P48751 1232 aa5.51□□□□□ -1.53
SCN1A-210ENST00000635776 PDE1AP54750 535 aa5.51□□□□□ -1.53
SCN1A-210ENST00000635776 ARHGEF25Q86VW2 580 aa5.51□□□□□ -1.53
SCN1A-210ENST00000635776 PLEKHM2Q8IWE5 1019 aa5.51□□□□□ -1.53
SCN1A-210ENST00000635776 DCCP43146 1447 aa5.51□□□□□ -1.53
SCN1A-210ENST00000635776 RNMTO43148 476 aaKnown RBP5.51□□□□□ -1.53
SCN1A-210ENST00000635776 CABP4P57796 275 aa5.51□□□□□ -1.53
SCN1A-210ENST00000635776 EVA1CP58658 441 aa5.51□□□□□ -1.53
SCN1A-210ENST00000635776 ANKRD26Q9UPS8 1709 aa5.51□□□□□ -1.53
SCN1A-210ENST00000635776 LETM1O95202 739 aaPredicted RBP5.51□□□□□ -1.53
SCN1A-210ENST00000635776 MEIS3Q99687 375 aa5.51□□□□□ -1.53
SCN1A-210ENST00000635776 PRDM11Q9NQV5 511 aa5.5□□□□□ -1.53
SCN1A-210ENST00000635776 TNNQ9UQP3 1299 aa5.5□□□□□ -1.53
SCN1A-210ENST00000635776 CEP170BQ9Y4F5 1589 aaPredicted RBP5.5□□□□□ -1.53
SCN1A-210ENST00000635776 TSPOAP1O95153 1857 aa5.5□□□□□ -1.53
SCN1A-210ENST00000635776 TRAK2O60296 914 aa5.5□□□□□ -1.53
SCN1A-210ENST00000635776 FBLN1P23142 703 aa5.5□□□□□ -1.53
SCN1A-210ENST00000635776 HSP90AB3PQ58FF7 597 aa5.5□□□□□ -1.53
SCN1A-210ENST00000635776 EVI5LQ96CN4 794 aa5.5□□□□□ -1.53
SCN1A-210ENST00000635776 ECHDC1Q9NTX5 307 aa5.5□□□□□ -1.53
SCN1A-210ENST00000635776 DDX49Q9Y6V7 483 aaKnown RBP5.5□□□□□ -1.53
SCN1A-210ENST00000635776 WDR33Q9C0J8 1336 aaKnown RBP5.5□□□□□ -1.53
SCN1A-210ENST00000635776 EIF4A1P60842 406 aaKnown RBP5.5□□□□□ -1.53
SCN1A-210ENST00000635776 RHPN1Q8TCX5 695 aa5.5□□□□□ -1.53
SCN1A-210ENST00000635776 SSH3Q8TE77 659 aa5.5□□□□□ -1.53
SCN1A-210ENST00000635776 INTS4Q96HW7 963 aaKnown RBP5.5□□□□□ -1.53
SCN1A-210ENST00000635776 FGD1P98174 961 aa5.5□□□□□ -1.53
SCN1A-210ENST00000635776 STAP2Q9UGK3 403 aa5.5□□□□□ -1.53
SCN1A-210ENST00000635776 CRB1P82279 1406 aa5.49□□□□□ -1.53
SCN1A-210ENST00000635776 SHPRHQ149N8 1683 aa5.49□□□□□ -1.53
SCN1A-210ENST00000635776 FRAT2O75474 233 aaPredicted RBP5.49□□□□□ -1.53
SCN1A-210ENST00000635776 SH2B1Q9NRF2 756 aaPredicted RBP5.49□□□□□ -1.53
SCN1A-210ENST00000635776 LRRFIP2Q9Y608 721 aaKnown RBP5.49□□□□□ -1.53
SCN1A-210ENST00000635776 GOLGA6L4A6NEF3 574 aa5.49□□□□□ -1.53
SCN1A-210ENST00000635776 PRKCSHP14314 528 aaPredicted RBP5.49□□□□□ -1.53
SCN1A-210ENST00000635776 NEK4P51957 841 aa5.49□□□□□ -1.53
SCN1A-210ENST00000635776 GORABQ5T7V8 394 aa5.49□□□□□ -1.53
SCN1A-210ENST00000635776 HMG20BQ9P0W2 317 aa5.49□□□□□ -1.53
SCN1A-210ENST00000635776 SDSP20132 328 aa5.49□□□□□ -1.53
SCN1A-210ENST00000635776 CDCA7Q9BWT1 371 aaPredicted RBP5.49□□□□□ -1.53
SCN1A-210ENST00000635776 KIF20BQ96Q89 1820 aa5.49□□□□□ -1.53
SCN1A-210ENST00000635776 PCDH11XQ9BZA7 1347 aa5.48□□□□□ -1.53
SCN1A-210ENST00000635776 PCDH11YQ9BZA8 1340 aa5.48□□□□□ -1.53
SCN1A-210ENST00000635776 PI4KAP2A4QPH2 592 aa5.48□□□□□ -1.53
SCN1A-210ENST00000635776 TAF7LQ5H9L4 462 aa5.48□□□□□ -1.53
SCN1A-210ENST00000635776 PI4KAP1Q8N8J0 262 aa5.48□□□□□ -1.53
SCN1A-210ENST00000635776 IL17REQ8NFR9 667 aa5.48□□□□□ -1.53
SCN1A-210ENST00000635776 MTX1Q13505 466 aa5.48□□□□□ -1.53
SCN1A-210ENST00000635776 ZSCAN25Q6NSZ9 544 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms