RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 MIER1Q8N108 512 aa25.64■■□□□ 1.7
CROCCP4-202ENST00000633627 RTF1Q92541 710 aaKnown RBP25.63■■□□□ 1.69
CROCCP4-202ENST00000633627 ASAP1Q9ULH1 1129 aa25.63■■□□□ 1.69
CROCCP4-202ENST00000633627 LY75O60449 1722 aa25.63■■□□□ 1.69
CROCCP4-202ENST00000633627 SMARCC1Q92922 1105 aaPredicted RBP25.62■■□□□ 1.69
CROCCP4-202ENST00000633627 ATG3Q9NT62 314 aa25.62■■□□□ 1.69
CROCCP4-202ENST00000633627 PALLDQ8WX93 1383 aa25.61■■□□□ 1.69
CROCCP4-202ENST00000633627 RIPK4P57078 832 aa25.61■■□□□ 1.69
CROCCP4-202ENST00000633627 DCTN1Q14203 1278 aa25.61■■□□□ 1.69
CROCCP4-202ENST00000633627 MCM10Q7L590 875 aa25.61■■□□□ 1.69
CROCCP4-202ENST00000633627 SIPA1L3O60292 1781 aaPredicted RBP25.6■■□□□ 1.69
CROCCP4-202ENST00000633627 APAF1O14727 1248 aa25.59■■□□□ 1.69
CROCCP4-202ENST00000633627 TEFQ10587 303 aa25.59■■□□□ 1.69
CROCCP4-202ENST00000633627 RRP7AQ9Y3A4 280 aaKnown RBP25.59■■□□□ 1.69
CROCCP4-202ENST00000633627 NUP188Q5SRE5 1749 aa25.59■■□□□ 1.69
CROCCP4-202ENST00000633627 SLC27A3Q5K4L6 730 aa25.58■■□□□ 1.69
CROCCP4-202ENST00000633627 FAM9BQ8IZU0 186 aa25.58■■□□□ 1.69
CROCCP4-202ENST00000633627 LRRC4BQ9NT99 713 aa25.58■■□□□ 1.69
CROCCP4-202ENST00000633627 TRIM35Q9UPQ4 493 aa25.56■■□□□ 1.68
CROCCP4-202ENST00000633627 NEUROD2Q15784 382 aa25.55■■□□□ 1.68
CROCCP4-202ENST00000633627 PAPPAQ13219 1627 aa25.55■■□□□ 1.68
CROCCP4-202ENST00000633627 LOC102724428A0A0B4J2F2 783 aa25.54■■□□□ 1.68
CROCCP4-202ENST00000633627 SIK1P57059 783 aa25.54■■□□□ 1.68
CROCCP4-202ENST00000633627 LMOD3Q0VAK6 560 aa25.54■■□□□ 1.68
CROCCP4-202ENST00000633627 THUMPD2Q9BTF0 503 aaKnown RBP25.54■■□□□ 1.68
CROCCP4-202ENST00000633627 CCNL1Q9UK58 526 aaPredicted RBP25.54■■□□□ 1.68
CROCCP4-202ENST00000633627 KCNQ4P56696 695 aa25.53■■□□□ 1.68
CROCCP4-202ENST00000633627 SLC39A6Q13433 755 aa25.53■■□□□ 1.68
CROCCP4-202ENST00000633627 SLC4A9Q96Q91 983 aa25.52■■□□□ 1.68
CROCCP4-202ENST00000633627 TAF7Q15545 349 aaPredicted RBP25.51■■□□□ 1.67
CROCCP4-202ENST00000633627 ZNF831Q5JPB2 1677 aa25.5■■□□□ 1.67
CROCCP4-202ENST00000633627 BTBD11A6QL63 1104 aa25.49■■□□□ 1.67
CROCCP4-202ENST00000633627 PTCD1O75127 700 aaKnown RBP25.49■■□□□ 1.67
CROCCP4-202ENST00000633627 ZNF790Q6PG37 636 aa25.49■■□□□ 1.67
CROCCP4-202ENST00000633627 ANO8Q9HCE9 1232 aaPredicted RBP25.49■■□□□ 1.67
CROCCP4-202ENST00000633627 UBR2Q8IWV8 1755 aa25.49■■□□□ 1.67
CROCCP4-202ENST00000633627 KCPQ6ZWJ8 1503 aa25.48■■□□□ 1.67
CROCCP4-202ENST00000633627 NCBP3Q53F19 620 aaKnown RBP25.48■■□□□ 1.67
CROCCP4-202ENST00000633627 RBM42Q9BTD8 480 aaKnown RBP25.48■■□□□ 1.67
CROCCP4-202ENST00000633627 TAF1LQ8IZX4 1826 aa25.48■■□□□ 1.67
CROCCP4-202ENST00000633627 ITPK1Q13572 414 aa25.47■■□□□ 1.67
CROCCP4-202ENST00000633627 NBPF14Q5TI25 921 aa25.47■■□□□ 1.67
CROCCP4-202ENST00000633627 KCNQ3O43525 872 aa25.46■■□□□ 1.67
CROCCP4-202ENST00000633627 ATP6V1AP38606 617 aa25.46■■□□□ 1.67
CROCCP4-202ENST00000633627 CCDC27Q2M243 656 aa25.45■■□□□ 1.66
CROCCP4-202ENST00000633627 TTC5Q8N0Z6 440 aa25.45■■□□□ 1.66
CROCCP4-202ENST00000633627 AKT1S1Q96B36 256 aa25.45■■□□□ 1.66
CROCCP4-202ENST00000633627 C5P01031 1676 aa25.45■■□□□ 1.66
CROCCP4-202ENST00000633627 SENP3-EIF4A1A0A087X0R7 540 aa25.44■■□□□ 1.66
CROCCP4-202ENST00000633627 HMGB2P26583 209 aaKnown RBP25.44■■□□□ 1.66
CROCCP4-202ENST00000633627 ZNF496Q96IT1 587 aaPredicted RBP25.44■■□□□ 1.66
CROCCP4-202ENST00000633627 MIS18AQ9NYP9 233 aa25.44■■□□□ 1.66
CROCCP4-202ENST00000633627 CICQ96RK0 1608 aaPredicted RBP25.44■■□□□ 1.66
CROCCP4-202ENST00000633627 SLC15A2Q16348 729 aa25.43■■□□□ 1.66
CROCCP4-202ENST00000633627 ZNF827Q17R98 1081 aa25.43■■□□□ 1.66
CROCCP4-202ENST00000633627 LINC00116Q8NCU8 138 aa25.43■■□□□ 1.66
CROCCP4-202ENST00000633627 KDM3BQ7LBC6 1761 aa25.42■■□□□ 1.66
CROCCP4-202ENST00000633627 VSIG10Q8N0Z9 540 aa25.42■■□□□ 1.66
CROCCP4-202ENST00000633627 BABAM1Q9NWV8 329 aa25.42■■□□□ 1.66
CROCCP4-202ENST00000633627 STK32BQ9NY57 414 aa25.42■■□□□ 1.66
CROCCP4-202ENST00000633627 TJP1Q07157 1748 aa25.41■■□□□ 1.66
CROCCP4-202ENST00000633627 R3HDM1Q15032 1099 aaKnown RBP25.41■■□□□ 1.66
CROCCP4-202ENST00000633627 WWC1Q8IX03 1113 aa25.4■■□□□ 1.66
CROCCP4-202ENST00000633627 FMNL2Q96PY5 1086 aa25.4■■□□□ 1.66
CROCCP4-202ENST00000633627 HEG1Q9ULI3 1381 aa25.4■■□□□ 1.66
CROCCP4-202ENST00000633627 C4BP0C0L5 1744 aa25.4■■□□□ 1.66
CROCCP4-202ENST00000633627 COL5A3P25940 1745 aaPredicted RBP25.4■■□□□ 1.66
CROCCP4-202ENST00000633627 CHL1O00533 1208 aa25.39■■□□□ 1.66
CROCCP4-202ENST00000633627 DNAJC10Q8IXB1 793 aa25.39■■□□□ 1.66
CROCCP4-202ENST00000633627 NGEFQ8N5V2 710 aa25.39■■□□□ 1.66
CROCCP4-202ENST00000633627 MYH14Q7Z406 1995 aaKnown RBP25.37■■□□□ 1.65
CROCCP4-202ENST00000633627 PSDA5PKW4 1024 aaPredicted RBP25.37■■□□□ 1.65
CROCCP4-202ENST00000633627 ZNF853P0CG23 659 aa25.37■■□□□ 1.65
CROCCP4-202ENST00000633627 CFAP44Q96MT7 982 aa25.37■■□□□ 1.65
CROCCP4-202ENST00000633627 TSPYL4Q9UJ04 414 aa25.37■■□□□ 1.65
CROCCP4-202ENST00000633627 EIF4A1P60842 406 aaKnown RBP25.36■■□□□ 1.65
CROCCP4-202ENST00000633627 CALD1Q05682 793 aaKnown RBP25.36■■□□□ 1.65
CROCCP4-202ENST00000633627 RC3H1Q5TC82 1133 aaKnown RBP25.36■■□□□ 1.65
CROCCP4-202ENST00000633627 CNTNAP4Q9C0A0 1308 aa25.36■■□□□ 1.65
CROCCP4-202ENST00000633627 CYP19A1P11511 503 aaPredicted RBP25.35■■□□□ 1.65
CROCCP4-202ENST00000633627 SALL2Q9Y467 1007 aaPredicted RBP25.35■■□□□ 1.65
CROCCP4-202ENST00000633627 TUBGCP6Q96RT7 1819 aa25.35■■□□□ 1.65
CROCCP4-202ENST00000633627 QSER1Q2KHR3 1735 aa25.34■■□□□ 1.65
CROCCP4-202ENST00000633627 IFT57Q9NWB7 429 aa25.34■■□□□ 1.65
CROCCP4-202ENST00000633627 UBR3Q6ZT12 1888 aa25.33■■□□□ 1.65
CROCCP4-202ENST00000633627 AMIGO3Q86WK7 504 aa25.33■■□□□ 1.65
CROCCP4-202ENST00000633627 TEX13AQ9BXU3 409 aaPredicted RBP25.33■■□□□ 1.65
CROCCP4-202ENST00000633627 TFCP2L1Q9NZI6 479 aa25.33■■□□□ 1.65
CROCCP4-202ENST00000633627 LAS1LQ9Y4W2 734 aaKnown RBP25.33■■□□□ 1.65
CROCCP4-202ENST00000633627 SNRPA1P09661 255 aaKnown RBP25.32■■□□□ 1.64
CROCCP4-202ENST00000633627 CRKLP46109 303 aaKnown RBP25.32■■□□□ 1.64
CROCCP4-202ENST00000633627 GNAI1P63096 354 aa25.32■■□□□ 1.64
CROCCP4-202ENST00000633627 INTS5Q6P9B9 1019 aaKnown RBP25.32■■□□□ 1.64
CROCCP4-202ENST00000633627 AK7Q96M32 723 aa25.32■■□□□ 1.64
CROCCP4-202ENST00000633627 PNPLA7Q6ZV29 1317 aa25.32■■□□□ 1.64
CROCCP4-202ENST00000633627 PRAMEF22A3QJZ6 481 aa25.31■■□□□ 1.64
CROCCP4-202ENST00000633627 WDR63Q8IWG1 891 aa25.31■■□□□ 1.64
CROCCP4-202ENST00000633627 PDGFDQ9GZP0 370 aaPredicted RBP25.31■■□□□ 1.64
CROCCP4-202ENST00000633627 IL16Q14005 1332 aa25.31■■□□□ 1.64
CROCCP4-202ENST00000633627 GIGYF1O75420 1035 aaPredicted RBP25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms