RNA–Protein interactions for RNA: ENST00000629277.1

MECP2-218, Transcript of methyl-CpG binding protein 2, humanhuman

Gene MECP2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-218ENST00000629277 TSPYL4Q9UJ04 414 aa22.83■■□□□ 1.25
MECP2-218ENST00000629277 CRB1P82279 1406 aa22.83■■□□□ 1.25
MECP2-218ENST00000629277 MPNDQ8N594 471 aa22.83■■□□□ 1.24
MECP2-218ENST00000629277 IL25Q9H293 177 aa22.83■■□□□ 1.24
MECP2-218ENST00000629277 PDCL3Q9H2J4 239 aa22.83■■□□□ 1.24
MECP2-218ENST00000629277 FAM13BQ9NYF5 915 aa22.83■■□□□ 1.24
MECP2-218ENST00000629277 ZKSCAN5Q9Y2L8 839 aa22.83■■□□□ 1.24
MECP2-218ENST00000629277 GADD45BO75293 160 aaPredicted RBP22.81■■□□□ 1.24
MECP2-218ENST00000629277 MTHFSDQ2M296 383 aaKnown RBP22.81■■□□□ 1.24
MECP2-218ENST00000629277 SALL3Q9BXA9 1300 aa22.81■■□□□ 1.24
MECP2-218ENST00000629277 GNAI2P04899 355 aa22.81■■□□□ 1.24
MECP2-218ENST00000629277 MX1P20591 662 aa22.81■■□□□ 1.24
MECP2-218ENST00000629277 CHMLP26374 656 aa22.8■■□□□ 1.24
MECP2-218ENST00000629277 LRRCC1Q9C099 1032 aa22.8■■□□□ 1.24
MECP2-218ENST00000629277 MAP3K19Q56UN5 1328 aa22.79■■□□□ 1.24
MECP2-218ENST00000629277 TTC21BQ7Z4L5 1316 aa22.79■■□□□ 1.24
MECP2-218ENST00000629277 SETD1AO15047 1707 aaKnown RBP22.79■■□□□ 1.24
MECP2-218ENST00000629277 CUL4AQ13619 759 aa22.79■■□□□ 1.24
MECP2-218ENST00000629277 CCT4P50991 539 aaKnown RBP22.78■■□□□ 1.24
MECP2-218ENST00000629277 UQCRHLA0A096LP55 91 aa22.78■■□□□ 1.24
MECP2-218ENST00000629277 UQCRHP07919 91 aa22.78■■□□□ 1.24
MECP2-218ENST00000629277 ARID3AQ99856 593 aa22.78■■□□□ 1.24
MECP2-218ENST00000629277 MBD3O95983 291 aa22.77■■□□□ 1.24
MECP2-218ENST00000629277 ACEP12821 1306 aa22.77■■□□□ 1.24
MECP2-218ENST00000629277 MAP4K4O95819 1239 aaPredicted RBP22.77■■□□□ 1.24
MECP2-218ENST00000629277 FKBP5Q13451 457 aaPredicted RBP22.76■■□□□ 1.23
MECP2-218ENST00000629277 IL1RAPL2Q9NP60 686 aa22.76■■□□□ 1.23
MECP2-218ENST00000629277 DTNBO60941 627 aa22.76■■□□□ 1.23
MECP2-218ENST00000629277 RTF1Q92541 710 aaKnown RBP22.76■■□□□ 1.23
MECP2-218ENST00000629277 LARP6Q9BRS8 491 aaKnown RBP22.76■■□□□ 1.23
MECP2-218ENST00000629277 C3P01024 1663 aa22.75■■□□□ 1.23
MECP2-218ENST00000629277 TSPY26PQ9H489 355 aa22.75■■□□□ 1.23
MECP2-218ENST00000629277 MCCP23508 829 aa22.74■■□□□ 1.23
MECP2-218ENST00000629277 CCDC39Q9UFE4 941 aa22.74■■□□□ 1.23
MECP2-218ENST00000629277 LRRFIP2Q9Y608 721 aaKnown RBP22.74■■□□□ 1.23
MECP2-218ENST00000629277 MON2Q7Z3U7 1717 aa22.74■■□□□ 1.23
MECP2-218ENST00000629277 FLIIQ13045 1269 aa22.74■■□□□ 1.23
MECP2-218ENST00000629277 USP48Q86UV5 1035 aa22.74■■□□□ 1.23
MECP2-218ENST00000629277 NRXN3Q9Y4C0 1643 aa22.74■■□□□ 1.23
MECP2-218ENST00000629277 MCM2P49736 904 aa22.73■■□□□ 1.23
MECP2-218ENST00000629277 NRKQ7Z2Y5 1582 aa22.73■■□□□ 1.23
MECP2-218ENST00000629277 NUTM1Q86Y26 1132 aa22.73■■□□□ 1.23
MECP2-218ENST00000629277 PTMAP06454 111 aaKnown RBP22.72■■□□□ 1.23
MECP2-218ENST00000629277 TERF1P54274 439 aa22.72■■□□□ 1.23
MECP2-218ENST00000629277 ZNF830Q96NB3 372 aaPredicted RBP22.72■■□□□ 1.23
MECP2-218ENST00000629277 STK31Q9BXU1 1019 aa22.72■■□□□ 1.23
MECP2-218ENST00000629277 ROBO2Q9HCK4 1378 aa22.71■■□□□ 1.23
MECP2-218ENST00000629277 ATP8B2P98198 1209 aa22.71■■□□□ 1.23
MECP2-218ENST00000629277 PEAK1Q9H792 1746 aa22.71■■□□□ 1.23
MECP2-218ENST00000629277 INTS4Q96HW7 963 aaKnown RBP22.71■■□□□ 1.23
MECP2-218ENST00000629277 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.71■■□□□ 1.23
MECP2-218ENST00000629277 RIMS1Q86UR5 1692 aaKnown RBP22.7■■□□□ 1.23
MECP2-218ENST00000629277 JARID2Q92833 1246 aaPredicted RBP22.7■■□□□ 1.22
MECP2-218ENST00000629277 OVOS2A0A0J9YW53 1432 aa22.7■■□□□ 1.22
MECP2-218ENST00000629277 OVOS2Q6IE36 1432 aa22.7■■□□□ 1.22
MECP2-218ENST00000629277 ANAPC15P60006 121 aa22.69■■□□□ 1.22
MECP2-218ENST00000629277 SRCIN1Q9C0H9 1055 aa22.68■■□□□ 1.22
MECP2-218ENST00000629277 GNAI3P08754 354 aa22.67■■□□□ 1.22
MECP2-218ENST00000629277 CNPY2Q9Y2B0 182 aa22.67■■□□□ 1.22
MECP2-218ENST00000629277 MCM5P33992 734 aa22.67■■□□□ 1.22
MECP2-218ENST00000629277 EYA1Q99502 592 aa22.67■■□□□ 1.22
MECP2-218ENST00000629277 STAP2Q9UGK3 403 aa22.67■■□□□ 1.22
MECP2-218ENST00000629277 USP25Q9UHP3 1055 aa22.67■■□□□ 1.22
MECP2-218ENST00000629277 USP44Q9H0E7 712 aa22.66■■□□□ 1.22
MECP2-218ENST00000629277 CSPP1Q1MSJ5 1256 aa22.66■■□□□ 1.22
MECP2-218ENST00000629277 C17orf53Q8N3J3 647 aaPredicted RBP22.66■■□□□ 1.22
MECP2-218ENST00000629277 AKAP12Q02952 1782 aa22.66■■□□□ 1.22
MECP2-218ENST00000629277 RPAP1Q9BWH6 1393 aaPredicted RBP22.65■■□□□ 1.22
MECP2-218ENST00000629277 CPA1P15085 419 aa22.65■■□□□ 1.22
MECP2-218ENST00000629277 HSPA4P34932 840 aa22.65■■□□□ 1.22
MECP2-218ENST00000629277 SYAP1Q96A49 352 aaPredicted RBP22.65■■□□□ 1.22
MECP2-218ENST00000629277 ITSN1Q15811 1721 aa22.64■■□□□ 1.22
MECP2-218ENST00000629277 SPATA31D1Q6ZQQ2 1576 aa22.64■■□□□ 1.22
MECP2-218ENST00000629277 RASEFQ8IZ41 740 aa22.64■■□□□ 1.21
MECP2-218ENST00000629277 WDR33Q9C0J8 1336 aaKnown RBP22.64■■□□□ 1.21
MECP2-218ENST00000629277 FAM69CQ0P6D2 419 aa22.63■■□□□ 1.21
MECP2-218ENST00000629277 CCDC30Q5VVM6 783 aa22.63■■□□□ 1.21
MECP2-218ENST00000629277 PHAXQ9H814 394 aaKnown RBP22.63■■□□□ 1.21
MECP2-218ENST00000629277 USP6P35125 1406 aa22.63■■□□□ 1.21
MECP2-218ENST00000629277 TSC1Q92574 1164 aa22.63■■□□□ 1.21
MECP2-218ENST00000629277 HCLS1P14317 486 aaPredicted RBP22.62■■□□□ 1.21
MECP2-218ENST00000629277 KIAA2012Q0VF49 1180 aa22.62■■□□□ 1.21
MECP2-218ENST00000629277 SASS6Q6UVJ0 657 aa22.62■■□□□ 1.21
MECP2-218ENST00000629277 TTC12Q9H892 705 aaPredicted RBP22.62■■□□□ 1.21
MECP2-218ENST00000629277 CEP170BQ9Y4F5 1589 aaPredicted RBP22.62■■□□□ 1.21
MECP2-218ENST00000629277 SURF6O75683 361 aaKnown RBP22.62■■□□□ 1.21
MECP2-218ENST00000629277 ARHGEF10O15013 1369 aa22.62■■□□□ 1.21
MECP2-218ENST00000629277 RGPD1P0DJD0 1748 aa22.61■■□□□ 1.21
MECP2-218ENST00000629277 UBTFL1P0CB47 393 aaPredicted RBP22.61■■□□□ 1.21
MECP2-218ENST00000629277 SNX14Q9Y5W7 946 aa22.61■■□□□ 1.21
MECP2-218ENST00000629277 TECPR2O15040 1411 aa22.61■■□□□ 1.21
MECP2-218ENST00000629277 AMPHP49418 695 aa22.61■■□□□ 1.21
MECP2-218ENST00000629277 AK2P54819 239 aa22.61■■□□□ 1.21
MECP2-218ENST00000629277 PPP1R42Q7Z4L9 355 aa22.61■■□□□ 1.21
MECP2-218ENST00000629277 SIRT1Q96EB6 747 aa22.61■■□□□ 1.21
MECP2-218ENST00000629277 PODXL2Q9NZ53 605 aa22.61■■□□□ 1.21
MECP2-218ENST00000629277 PLEKHG3A1L390 1219 aa22.6■■□□□ 1.21
MECP2-218ENST00000629277 DNTTIP2Q5QJE6 756 aaKnown RBP22.6■■□□□ 1.21
MECP2-218ENST00000629277 SPG7Q9UQ90 795 aa22.6■■□□□ 1.21
MECP2-218ENST00000629277 SSH2Q76I76 1423 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms