RNA–Protein interactions for RNA: ENST00000627740.1

APLF-207, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 2,180 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-207ENST00000627740 FAM196AQ6ZSG2 479 aa12.92□□□□□ -0.34
APLF-207ENST00000627740 IFT57Q9NWB7 429 aa12.92□□□□□ -0.34
APLF-207ENST00000627740 KDM3BQ7LBC6 1761 aa12.92□□□□□ -0.34
APLF-207ENST00000627740 CFAP44Q96MT7 982 aa12.91□□□□□ -0.34
APLF-207ENST00000627740 BABAM1Q9NWV8 329 aa12.91□□□□□ -0.34
APLF-207ENST00000627740 TMOD3Q9NYL9 352 aa12.91□□□□□ -0.34
APLF-207ENST00000627740 E9PSI1 815 aa12.91□□□□□ -0.34
APLF-207ENST00000627740 NFATC2IPQ8NCF5 419 aa12.91□□□□□ -0.34
APLF-207ENST00000627740 FAM182BQ5T319 152 aa12.9□□□□□ -0.34
APLF-207ENST00000627740 SYTL4Q96C24 671 aaPredicted RBP12.9□□□□□ -0.34
APLF-207ENST00000627740 MYH16Q9H6N6 1097 aa12.9□□□□□ -0.34
APLF-207ENST00000627740 LAS1LQ9Y4W2 734 aaKnown RBP12.9□□□□□ -0.34
APLF-207ENST00000627740 PAPPAQ13219 1627 aa12.9□□□□□ -0.34
APLF-207ENST00000627740 BTBD11A6QL63 1104 aa12.9□□□□□ -0.34
APLF-207ENST00000627740 ZNF853P0CG23 659 aa12.9□□□□□ -0.34
APLF-207ENST00000627740 PRIM1P49642 420 aaKnown RBP12.9□□□□□ -0.34
APLF-207ENST00000627740 ACSBG1Q96GR2 724 aa12.9□□□□□ -0.34
APLF-207ENST00000627740 BTAF1O14981 1849 aa12.89□□□□□ -0.35
APLF-207ENST00000627740 TSPYL4Q9UJ04 414 aa12.89□□□□□ -0.35
APLF-207ENST00000627740 CHL1O00533 1208 aa12.88□□□□□ -0.35
APLF-207ENST00000627740 SLFN5Q08AF3 891 aa12.88□□□□□ -0.35
APLF-207ENST00000627740 UBR2Q8IWV8 1755 aa12.88□□□□□ -0.35
APLF-207ENST00000627740 PIGBQ92521 554 aa12.87□□□□□ -0.35
APLF-207ENST00000627740 CDCA7LQ96GN5 454 aa12.87□□□□□ -0.35
APLF-207ENST00000627740 SPINK5Q9NQ38 1064 aaPredicted RBP12.87□□□□□ -0.35
APLF-207ENST00000627740 MBIPQ9NS73 344 aa12.87□□□□□ -0.35
APLF-207ENST00000627740 TTC5Q8N0Z6 440 aa12.87□□□□□ -0.35
APLF-207ENST00000627740 MIS18AQ9NYP9 233 aa12.87□□□□□ -0.35
APLF-207ENST00000627740 FANCIQ9NVI1 1328 aa12.87□□□□□ -0.35
APLF-207ENST00000627740 KCNQ2O43526 872 aa12.86□□□□□ -0.35
APLF-207ENST00000627740 BCL11BQ9C0K0 894 aaPredicted RBP12.86□□□□□ -0.35
APLF-207ENST00000627740 ZNF790Q6PG37 636 aa12.86□□□□□ -0.35
APLF-207ENST00000627740 TRMT2AQ8IZ69 625 aaKnown RBP12.86□□□□□ -0.35
APLF-207ENST00000627740 TSR2Q969E8 191 aaKnown RBP12.86□□□□□ -0.35
APLF-207ENST00000627740 SLC39A6Q13433 755 aa12.84□□□□□ -0.35
APLF-207ENST00000627740 DUSP27Q5VZP5 1158 aa12.84□□□□□ -0.35
APLF-207ENST00000627740 SMARCC1Q92922 1105 aaPredicted RBP12.84□□□□□ -0.35
APLF-207ENST00000627740 TNS1Q9HBL0 1735 aaKnown RBP12.84□□□□□ -0.35
APLF-207ENST00000627740 TRIM37O94972 964 aa12.83□□□□□ -0.36
APLF-207ENST00000627740 FMNL2Q96PY5 1086 aa12.83□□□□□ -0.36
APLF-207ENST00000627740 ATG3Q9NT62 314 aa12.83□□□□□ -0.36
APLF-207ENST00000627740 ASAP1Q9ULH1 1129 aa12.83□□□□□ -0.36
APLF-207ENST00000627740 KCPQ6ZWJ8 1503 aa12.83□□□□□ -0.36
APLF-207ENST00000627740 LY75O60449 1722 aa12.83□□□□□ -0.36
APLF-207ENST00000627740 KCNQ3O43525 872 aa12.82□□□□□ -0.36
APLF-207ENST00000627740 EIF4A1P60842 406 aaKnown RBP12.82□□□□□ -0.36
APLF-207ENST00000627740 ZNF831Q5JPB2 1677 aa12.82□□□□□ -0.36
APLF-207ENST00000627740 LAMB4A4D0S4 1761 aa12.82□□□□□ -0.36
APLF-207ENST00000627740 EXOSC9Q06265 439 aaKnown RBP12.81□□□□□ -0.36
APLF-207ENST00000627740 PTF1AQ7RTS3 328 aa12.81□□□□□ -0.36
APLF-207ENST00000627740 PALLDQ8WX93 1383 aa12.81□□□□□ -0.36
APLF-207ENST00000627740 C5P01031 1676 aa12.81□□□□□ -0.36
APLF-207ENST00000627740 SOS1Q07889 1333 aaPredicted RBP12.81□□□□□ -0.36
APLF-207ENST00000627740 RGPD3A6NKT7 1758 aaPredicted RBP12.81□□□□□ -0.36
APLF-207ENST00000627740 RGPD4Q7Z3J3 1758 aa12.81□□□□□ -0.36
APLF-207ENST00000627740 ZNF496Q96IT1 587 aaPredicted RBP12.81□□□□□ -0.36
APLF-207ENST00000627740 CICQ96RK0 1608 aaPredicted RBP12.8□□□□□ -0.36
APLF-207ENST00000627740 PTCD1O75127 700 aaKnown RBP12.8□□□□□ -0.36
APLF-207ENST00000627740 HEG1Q9ULI3 1381 aa12.8□□□□□ -0.36
APLF-207ENST00000627740 HOXB7P09629 217 aa12.8□□□□□ -0.36
APLF-207ENST00000627740 CT47B1P0C2W7 299 aaPredicted RBP12.8□□□□□ -0.36
APLF-207ENST00000627740 VSIG10Q8N0Z9 540 aa12.8□□□□□ -0.36
APLF-207ENST00000627740 RBM42Q9BTD8 480 aaKnown RBP12.8□□□□□ -0.36
APLF-207ENST00000627740 CACNA1FO60840 1977 aa12.8□□□□□ -0.36
APLF-207ENST00000627740 SNRPA1P09661 255 aaKnown RBP12.79□□□□□ -0.36
APLF-207ENST00000627740 TWISTNBQ3B726 338 aaPredicted RBP12.79□□□□□ -0.36
APLF-207ENST00000627740 C8orf58Q8NAV2 365 aa12.79□□□□□ -0.36
APLF-207ENST00000627740 CHMP4AQ9BY43 222 aa12.79□□□□□ -0.36
APLF-207ENST00000627740 TJP1Q07157 1748 aa12.79□□□□□ -0.36
APLF-207ENST00000627740 GIGYF1O75420 1035 aaPredicted RBP12.79□□□□□ -0.36
APLF-207ENST00000627740 LOC102724428A0A0B4J2F2 783 aa12.78□□□□□ -0.36
APLF-207ENST00000627740 SIK1P57059 783 aa12.78□□□□□ -0.36
APLF-207ENST00000627740 SF3B2Q13435 895 aaKnown RBP12.78□□□□□ -0.36
APLF-207ENST00000627740 KRT24Q2M2I5 525 aa12.78□□□□□ -0.36
APLF-207ENST00000627740 TEX13AQ9BXU3 409 aaPredicted RBP12.78□□□□□ -0.36
APLF-207ENST00000627740 TAF1LQ8IZX4 1826 aa12.77□□□□□ -0.36
APLF-207ENST00000627740 ELL2O00472 640 aaPredicted RBP12.77□□□□□ -0.36
APLF-207ENST00000627740 APBA3O96018 575 aa12.77□□□□□ -0.36
APLF-207ENST00000627740 TSPYL6Q8N831 410 aa12.77□□□□□ -0.36
APLF-207ENST00000627740 ZNF428Q96B54 188 aa12.77□□□□□ -0.36
APLF-207ENST00000627740 COL5A3P25940 1745 aaPredicted RBP12.77□□□□□ -0.37
APLF-207ENST00000627740 PLSCR1O15162 318 aa12.77□□□□□ -0.37
APLF-207ENST00000627740 CENPBP07199 599 aaPredicted RBP12.77□□□□□ -0.37
APLF-207ENST00000627740 CCDC125Q86Z20 511 aa12.77□□□□□ -0.37
APLF-207ENST00000627740 ATP6V1AP38606 617 aa12.76□□□□□ -0.37
APLF-207ENST00000627740 VAMP4O75379 141 aa12.76□□□□□ -0.37
APLF-207ENST00000627740 HMGB2P26583 209 aaKnown RBP12.76□□□□□ -0.37
APLF-207ENST00000627740 STARD3NLO95772 234 aa12.75□□□□□ -0.37
APLF-207ENST00000627740 SLC27A3Q5K4L6 730 aa12.75□□□□□ -0.37
APLF-207ENST00000627740 HDGFL1Q5TGJ6 251 aa12.75□□□□□ -0.37
APLF-207ENST00000627740 SLC4A9Q96Q91 983 aa12.75□□□□□ -0.37
APLF-207ENST00000627740 CCNL1Q9UK58 526 aaPredicted RBP12.75□□□□□ -0.37
APLF-207ENST00000627740 CCDC30Q5VVM6 783 aa12.74□□□□□ -0.37
APLF-207ENST00000627740 PRAMEF22A3QJZ6 481 aa12.74□□□□□ -0.37
APLF-207ENST00000627740 EIF2S2P20042 333 aaKnown RBP12.74□□□□□ -0.37
APLF-207ENST00000627740 BAG6P46379 1132 aa12.74□□□□□ -0.37
APLF-207ENST00000627740 DNAJC10Q8IXB1 793 aa12.74□□□□□ -0.37
APLF-207ENST00000627740 ALDH1L2Q3SY69 923 aa12.73□□□□□ -0.37
APLF-207ENST00000627740 STK31Q9BXU1 1019 aa12.73□□□□□ -0.37
APLF-207ENST00000627740 USP16Q9Y5T5 823 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms