RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 SEPT11Q9NVA2 429 aaKnown RBP15.02■□□□□ -0
SCN8A-209ENST00000627620 IFIT1P09914 478 aaKnown RBP15.02□□□□□ -0.01
SCN8A-209ENST00000627620 CAVIN4Q5BKX8 364 aa15.02□□□□□ -0.01
SCN8A-209ENST00000627620 FILIP1Q7Z7B0 1213 aa15.02□□□□□ -0.01
SCN8A-209ENST00000627620 FERMT3Q86UX7 667 aa15.02□□□□□ -0.01
SCN8A-209ENST00000627620 CCDC191Q8NCU4 936 aa15.02□□□□□ -0.01
SCN8A-209ENST00000627620 CEP131Q9UPN4 1083 aa15.02□□□□□ -0.01
SCN8A-209ENST00000627620 KIAA0586Q9BVV6 1533 aa15.02□□□□□ -0.01
SCN8A-209ENST00000627620 SMTNL1A8MU46 457 aa15.02□□□□□ -0.01
SCN8A-209ENST00000627620 NEFHP12036 1026 aa15.02□□□□□ -0.01
SCN8A-209ENST00000627620 EMILIN1Q9Y6C2 1016 aa15.02□□□□□ -0.01
SCN8A-209ENST00000627620 MPHOSPH10O00566 681 aaKnown RBP15.01□□□□□ -0.01
SCN8A-209ENST00000627620 GOLGA6L10A6NI86 522 aa15.01□□□□□ -0.01
SCN8A-209ENST00000627620 TMOD2Q9NZR1 351 aa15.01□□□□□ -0.01
SCN8A-209ENST00000627620 ABCC11Q96J66 1382 aa15.01□□□□□ -0.01
SCN8A-209ENST00000627620 MINDY4BA8MYZ0 360 aa15.01□□□□□ -0.01
SCN8A-209ENST00000627620 RBM10P98175 930 aaKnown RBP15.01□□□□□ -0.01
SCN8A-209ENST00000627620 F6X3S4 739 aa15.01□□□□□ -0.01
SCN8A-209ENST00000627620 ZPR1O75312 459 aa15.01□□□□□ -0.01
SCN8A-209ENST00000627620 MAP3K11Q16584 847 aa15.01□□□□□ -0.01
SCN8A-209ENST00000627620 ZNF287Q9HBT7 754 aa15□□□□□ -0.01
SCN8A-209ENST00000627620 MPRIPQ6WCQ1 1025 aa15□□□□□ -0.01
SCN8A-209ENST00000627620 LEKR1Q6ZMV7 388 aa15□□□□□ -0.01
SCN8A-209ENST00000627620 TSPYL1Q9H0U9 437 aa15□□□□□ -0.01
SCN8A-209ENST00000627620 MAGI1Q96QZ7 1491 aaPredicted RBP15□□□□□ -0.01
SCN8A-209ENST00000627620 POLR3DP05423 398 aaPredicted RBP15□□□□□ -0.01
SCN8A-209ENST00000627620 CAMK4Q16566 473 aa15□□□□□ -0.01
SCN8A-209ENST00000627620 EIF5P55010 431 aaKnown RBP14.99□□□□□ -0.01
SCN8A-209ENST00000627620 PHF8Q9UPP1 1060 aa14.99□□□□□ -0.01
SCN8A-209ENST00000627620 IFIT5Q13325 482 aaKnown RBP14.99□□□□□ -0.01
SCN8A-209ENST00000627620 NAPBQ9H115 298 aa14.99□□□□□ -0.01
SCN8A-209ENST00000627620 DNAAF4Q8WXU2 420 aa14.99□□□□□ -0.01
SCN8A-209ENST00000627620 CCDC8Q9H0W5 538 aaPredicted RBP14.99□□□□□ -0.01
SCN8A-209ENST00000627620 CC2D2AQ9P2K1 1620 aa14.99□□□□□ -0.01
SCN8A-209ENST00000627620 C20orf194Q5TEA3 1177 aa14.99□□□□□ -0.01
SCN8A-209ENST00000627620 MKNK2Q9HBH9 465 aa14.99□□□□□ -0.01
SCN8A-209ENST00000627620 ERLIN1O75477 346 aa14.98□□□□□ -0.01
SCN8A-209ENST00000627620 SEC63Q9UGP8 760 aaKnown RBP14.98□□□□□ -0.01
SCN8A-209ENST00000627620 CD109Q6YHK3 1445 aa14.98□□□□□ -0.01
SCN8A-209ENST00000627620 SYCE3A1L190 88 aa14.98□□□□□ -0.01
SCN8A-209ENST00000627620 MATR3P43243 847 aaKnown RBP eCLIP14.98□□□□□ -0.01
SCN8A-209ENST00000627620 DNMBPQ6XZF7 1577 aa14.98□□□□□ -0.01
SCN8A-209ENST00000627620 LRRFIP2Q9Y608 721 aaKnown RBP14.98□□□□□ -0.01
SCN8A-209ENST00000627620 CAMSAP2Q08AD1 1489 aa14.98□□□□□ -0.01
SCN8A-209ENST00000627620 NKTRP30414 1462 aaKnown RBP14.98□□□□□ -0.01
SCN8A-209ENST00000627620 HMGB2P26583 209 aaKnown RBP14.98□□□□□ -0.01
SCN8A-209ENST00000627620 CFAP100Q494V2 611 aa14.98□□□□□ -0.01
SCN8A-209ENST00000627620 WASLO00401 505 aaPredicted RBP14.97□□□□□ -0.01
SCN8A-209ENST00000627620 FOXO3O43524 673 aa14.97□□□□□ -0.01
SCN8A-209ENST00000627620 ANKIB1Q9P2G1 1089 aa14.97□□□□□ -0.01
SCN8A-209ENST00000627620 TRMT112Q9UI30 125 aaKnown RBP14.97□□□□□ -0.01
SCN8A-209ENST00000627620 AMOTL2Q9Y2J4 779 aa14.97□□□□□ -0.01
SCN8A-209ENST00000627620 CCDC66A2RUB6 948 aa14.97□□□□□ -0.01
SCN8A-209ENST00000627620 MAP3K12Q12852 859 aa14.97□□□□□ -0.01
SCN8A-209ENST00000627620 SEPT7Q16181 437 aaKnown RBP14.97□□□□□ -0.01
SCN8A-209ENST00000627620 CRACR2BQ8N4Y2 399 aaPredicted RBP14.97□□□□□ -0.01
SCN8A-209ENST00000627620 EPB41L2O43491 1005 aaKnown RBP14.97□□□□□ -0.01
SCN8A-209ENST00000627620 ADGRF5Q8IZF2 1346 aa14.97□□□□□ -0.01
SCN8A-209ENST00000627620 HYPKQ9NX55 129 aa14.96□□□□□ -0.01
SCN8A-209ENST00000627620 CCDC196A0A1B0GTZ2 297 aa14.96□□□□□ -0.01
SCN8A-209ENST00000627620 C11orf95C9JLR9 678 aaPredicted RBP14.96□□□□□ -0.01
SCN8A-209ENST00000627620 DZIP1Q86YF9 867 aaKnown RBP14.96□□□□□ -0.01
SCN8A-209ENST00000627620 DBF4Q9UBU7 674 aaPredicted RBP14.96□□□□□ -0.01
SCN8A-209ENST00000627620 HSP90AB3PQ58FF7 597 aa14.96□□□□□ -0.01
SCN8A-209ENST00000627620 IQCEQ6IPM2 695 aa14.96□□□□□ -0.02
SCN8A-209ENST00000627620 KIAA1328Q86T90 577 aa14.96□□□□□ -0.02
SCN8A-209ENST00000627620 SH2B1Q9NRF2 756 aaPredicted RBP14.96□□□□□ -0.02
SCN8A-209ENST00000627620 CENPHQ9H3R5 247 aa14.95□□□□□ -0.02
SCN8A-209ENST00000627620 ANKRD62A6NC57 917 aa14.95□□□□□ -0.02
SCN8A-209ENST00000627620 SLC5A1P13866 664 aa14.95□□□□□ -0.02
SCN8A-209ENST00000627620 HMGXB3Q12766 1538 aa14.95□□□□□ -0.02
SCN8A-209ENST00000627620 FBXO31Q5XUX0 539 aaPredicted RBP14.95□□□□□ -0.02
SCN8A-209ENST00000627620 HMGB1P09429 215 aaKnown RBP14.95□□□□□ -0.02
SCN8A-209ENST00000627620 CTCFLQ8NI51 663 aaPredicted RBP14.95□□□□□ -0.02
SCN8A-209ENST00000627620 C8orf76Q96K31 380 aa14.95□□□□□ -0.02
SCN8A-209ENST00000627620 ARHGAP29Q52LW3 1261 aa14.94□□□□□ -0.02
SCN8A-209ENST00000627620 IQGAP2Q13576 1575 aa14.94□□□□□ -0.02
SCN8A-209ENST00000627620 ABCC5O15440 1437 aa14.94□□□□□ -0.02
SCN8A-209ENST00000627620 A0A087WZG4 1122 aa14.94□□□□□ -0.02
SCN8A-209ENST00000627620 RANBP6O60518 1105 aaKnown RBP14.94□□□□□ -0.02
SCN8A-209ENST00000627620 IL27Q8NEV9 243 aa14.94□□□□□ -0.02
SCN8A-209ENST00000627620 SCAND2PQ9GZW5 306 aaPredicted RBP14.94□□□□□ -0.02
SCN8A-209ENST00000627620 ANKRD18BA2A2Z9 1011 aa14.94□□□□□ -0.02
SCN8A-209ENST00000627620 ADGRL1O94910 1474 aa14.94□□□□□ -0.02
SCN8A-209ENST00000627620 ZNF213O14771 459 aa14.94□□□□□ -0.02
SCN8A-209ENST00000627620 EIF3JO75822 258 aaKnown RBP14.94□□□□□ -0.02
SCN8A-209ENST00000627620 ADAMTS2O95450 1211 aa14.94□□□□□ -0.02
SCN8A-209ENST00000627620 ANKRD18AQ8IVF6 992 aa14.94□□□□□ -0.02
SCN8A-209ENST00000627620 ZRSR2Q15696 482 aaKnown RBP14.94□□□□□ -0.02
SCN8A-209ENST00000627620 TAF4BQ92750 862 aa14.94□□□□□ -0.02
SCN8A-209ENST00000627620 FLIIQ13045 1269 aa14.93□□□□□ -0.02
SCN8A-209ENST00000627620 CCDC82Q8N4S0 544 aa14.93□□□□□ -0.02
SCN8A-209ENST00000627620 ZNF397Q8NF99 534 aaPredicted RBP14.93□□□□□ -0.02
SCN8A-209ENST00000627620 SLC12A7Q9Y666 1083 aa14.93□□□□□ -0.02
SCN8A-209ENST00000627620 UQCRHLA0A096LP55 91 aa14.93□□□□□ -0.02
SCN8A-209ENST00000627620 UQCRHP07919 91 aa14.93□□□□□ -0.02
SCN8A-209ENST00000627620 GUCY1B3Q02153 619 aa14.93□□□□□ -0.02
SCN8A-209ENST00000627620 SKAP1Q86WV1 359 aa14.93□□□□□ -0.02
SCN8A-209ENST00000627620 IQCA1Q86XH1 822 aa14.93□□□□□ -0.02
SCN8A-209ENST00000627620 PPP1R12BO60237 982 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms