RNA–Protein interactions for RNA: ENST00000625837.2

DDX3X-215, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 5 BASIC

Gene DDX3X, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-215ENST00000625837 C9orf78Q9NZ63 289 aaPredicted RBP13.12□□□□□ -0.31
DDX3X-215ENST00000625837 ANKRD26Q9UPS8 1709 aa13.12□□□□□ -0.31
DDX3X-215ENST00000625837 HMMRO75330 724 aa13.12□□□□□ -0.31
DDX3X-215ENST00000625837 SURF6O75683 361 aaKnown RBP13.12□□□□□ -0.31
DDX3X-215ENST00000625837 TATP17735 454 aaPredicted RBP13.12□□□□□ -0.31
DDX3X-215ENST00000625837 PNMA6EA0A0J9YXQ4 647 aa13.11□□□□□ -0.31
DDX3X-215ENST00000625837 PROSER3Q2NL68 480 aa13.11□□□□□ -0.31
DDX3X-215ENST00000625837 NOL8Q76FK4 1167 aaKnown RBP13.11□□□□□ -0.31
DDX3X-215ENST00000625837 INTS3Q68E01 1043 aaKnown RBP13.11□□□□□ -0.31
DDX3X-215ENST00000625837 RBM42Q9BTD8 480 aaKnown RBP13.11□□□□□ -0.31
DDX3X-215ENST00000625837 NFKBIBQ15653 356 aa13.11□□□□□ -0.31
DDX3X-215ENST00000625837 CRB1P82279 1406 aa13.1□□□□□ -0.31
DDX3X-215ENST00000625837 CCT4P50991 539 aaKnown RBP13.1□□□□□ -0.31
DDX3X-215ENST00000625837 CWF19L2Q2TBE0 894 aaKnown RBP13.1□□□□□ -0.31
DDX3X-215ENST00000625837 NUTM1Q86Y26 1132 aa13.1□□□□□ -0.31
DDX3X-215ENST00000625837 ANKARQ7Z5J8 1434 aa13.1□□□□□ -0.31
DDX3X-215ENST00000625837 RNMTO43148 476 aaKnown RBP13.1□□□□□ -0.31
DDX3X-215ENST00000625837 ANKRD44Q8N8A2 993 aa13.1□□□□□ -0.31
DDX3X-215ENST00000625837 SRCIN1Q9C0H9 1055 aa13.1□□□□□ -0.31
DDX3X-215ENST00000625837 MON2Q7Z3U7 1717 aa13.1□□□□□ -0.31
DDX3X-215ENST00000625837 PEAK1Q9H792 1746 aa13.1□□□□□ -0.31
DDX3X-215ENST00000625837 PTPRCP08575 1304 aa13.09□□□□□ -0.31
DDX3X-215ENST00000625837 SRGAP3O43295 1099 aa13.09□□□□□ -0.31
DDX3X-215ENST00000625837 NBPF7P0C2Y1 421 aaPredicted RBP13.09□□□□□ -0.31
DDX3X-215ENST00000625837 EIF4A1P60842 406 aaKnown RBP13.09□□□□□ -0.31
DDX3X-215ENST00000625837 AKAP4Q5JQC9 854 aa13.09□□□□□ -0.31
DDX3X-215ENST00000625837 TTC5Q8N0Z6 440 aa13.09□□□□□ -0.31
DDX3X-215ENST00000625837 SYTL4Q96C24 671 aaPredicted RBP13.09□□□□□ -0.31
DDX3X-215ENST00000625837 TBC1D9Q6ZT07 1266 aa13.09□□□□□ -0.31
DDX3X-215ENST00000625837 RPAP2Q8IXW5 612 aaPredicted RBP13.09□□□□□ -0.31
DDX3X-215ENST00000625837 TBC1D2Q9BYX2 928 aa13.09□□□□□ -0.31
DDX3X-215ENST00000625837 SIL1Q9H173 461 aa13.09□□□□□ -0.31
DDX3X-215ENST00000625837 NPHP3Q7Z494 1330 aa13.08□□□□□ -0.32
DDX3X-215ENST00000625837 HSP90AB1P08238 724 aaKnown RBP13.08□□□□□ -0.32
DDX3X-215ENST00000625837 RIC3Q7Z5B4 369 aa13.08□□□□□ -0.32
DDX3X-215ENST00000625837 TBC1D32Q96NH3 1257 aa13.08□□□□□ -0.32
DDX3X-215ENST00000625837 DCTPP1Q9H773 170 aa13.08□□□□□ -0.32
DDX3X-215ENST00000625837 MAP3K2Q9Y2U5 619 aa13.08□□□□□ -0.32
DDX3X-215ENST00000625837 CHMP3Q9Y3E7 222 aa13.08□□□□□ -0.32
DDX3X-215ENST00000625837 KDRP35968 1356 aa13.08□□□□□ -0.32
DDX3X-215ENST00000625837 AMOTQ4VCS5 1084 aa13.07□□□□□ -0.32
DDX3X-215ENST00000625837 PLEKHM2Q8IWE5 1019 aa13.07□□□□□ -0.32
DDX3X-215ENST00000625837 HSCBQ8IWL3 235 aa13.07□□□□□ -0.32
DDX3X-215ENST00000625837 DLG5Q8TDM6 1919 aa13.07□□□□□ -0.32
DDX3X-215ENST00000625837 GNAI3P08754 354 aa13.07□□□□□ -0.32
DDX3X-215ENST00000625837 KNDC1Q76NI1 1749 aa13.07□□□□□ -0.32
DDX3X-215ENST00000625837 BRPF1P55201 1214 aaPredicted RBP13.07□□□□□ -0.32
DDX3X-215ENST00000625837 TPRNQ4KMQ1 711 aa13.07□□□□□ -0.32
DDX3X-215ENST00000625837 SLAIN2Q9P270 581 aa13.07□□□□□ -0.32
DDX3X-215ENST00000625837 RTL1A6NKG5 1358 aa13.07□□□□□ -0.32
DDX3X-215ENST00000625837 KIAA0232Q92628 1395 aa13.07□□□□□ -0.32
DDX3X-215ENST00000625837 ERBB3P21860 1342 aa13.06□□□□□ -0.32
DDX3X-215ENST00000625837 AKAP12Q02952 1782 aa13.06□□□□□ -0.32
DDX3X-215ENST00000625837 CABP4P57796 275 aa13.06□□□□□ -0.32
DDX3X-215ENST00000625837 PPP1R42Q7Z4L9 355 aa13.06□□□□□ -0.32
DDX3X-215ENST00000625837 DNAAF4Q8WXU2 420 aa13.06□□□□□ -0.32
DDX3X-215ENST00000625837 GZF1Q9H116 711 aaPredicted RBP13.06□□□□□ -0.32
DDX3X-215ENST00000625837 ATP5J2-PTCD1G3V325 749 aa13.06□□□□□ -0.32
DDX3X-215ENST00000625837 PRKCSHP14314 528 aaPredicted RBP13.06□□□□□ -0.32
DDX3X-215ENST00000625837 GSPT1P15170 499 aaKnown RBP13.06□□□□□ -0.32
DDX3X-215ENST00000625837 USP44Q9H0E7 712 aa13.06□□□□□ -0.32
DDX3X-215ENST00000625837 HTATSF1O43719 755 aaKnown RBP13.05□□□□□ -0.32
DDX3X-215ENST00000625837 PA2G4Q9UQ80 394 aaKnown RBP13.05□□□□□ -0.32
DDX3X-215ENST00000625837 C1orf167Q5SNV9 1468 aa13.05□□□□□ -0.32
DDX3X-215ENST00000625837 PIK3C2AO00443 1686 aa13.05□□□□□ -0.32
DDX3X-215ENST00000625837 BRINP3Q76B58 766 aa13.05□□□□□ -0.32
DDX3X-215ENST00000625837 SPG7Q9UQ90 795 aa13.05□□□□□ -0.32
DDX3X-215ENST00000625837 ADAMTS2O95450 1211 aa13.04□□□□□ -0.32
DDX3X-215ENST00000625837 SDSP20132 328 aa13.04□□□□□ -0.32
DDX3X-215ENST00000625837 ZNF496Q96IT1 587 aaPredicted RBP13.04□□□□□ -0.32
DDX3X-215ENST00000625837 LRRCC1Q9C099 1032 aa13.04□□□□□ -0.32
DDX3X-215ENST00000625837 USP16Q9Y5T5 823 aa13.04□□□□□ -0.32
DDX3X-215ENST00000625837 NUTM2BA6NNL0 878 aaPredicted RBP13.04□□□□□ -0.32
DDX3X-215ENST00000625837 NUTM2EB1AL46 878 aaPredicted RBP13.04□□□□□ -0.32
DDX3X-215ENST00000625837 CDC45O75419 566 aa13.04□□□□□ -0.32
DDX3X-215ENST00000625837 BMP2KLQ5H9B9 411 aa13.04□□□□□ -0.32
DDX3X-215ENST00000625837 NUTM2AQ8IVF1 878 aaPredicted RBP13.04□□□□□ -0.32
DDX3X-215ENST00000625837 DBF4Q9UBU7 674 aaPredicted RBP13.04□□□□□ -0.32
DDX3X-215ENST00000625837 PIP4K2BP78356 416 aa13.03□□□□□ -0.32
DDX3X-215ENST00000625837 FOXD4L5Q5VV16 416 aaPredicted RBP13.03□□□□□ -0.32
DDX3X-215ENST00000625837 KLHDC4Q8TBB5 520 aa13.03□□□□□ -0.32
DDX3X-215ENST00000625837 FOXD4L4Q8WXT5 416 aaPredicted RBP13.03□□□□□ -0.32
DDX3X-215ENST00000625837 COPS6Q7L5N1 327 aa13.03□□□□□ -0.32
DDX3X-215ENST00000625837 GIGYF1O75420 1035 aaPredicted RBP13.03□□□□□ -0.32
DDX3X-215ENST00000625837 CASC1Q6TDU7 716 aa13.03□□□□□ -0.32
DDX3X-215ENST00000625837 CCDC85AQ96PX6 553 aaPredicted RBP13.03□□□□□ -0.32
DDX3X-215ENST00000625837 KDM4FA0A1W2PPD8 638 aa13.02□□□□□ -0.32
DDX3X-215ENST00000625837 ZNF790Q6PG37 636 aa13.02□□□□□ -0.32
DDX3X-215ENST00000625837 IFNL2Q8IZJ0 200 aa13.02□□□□□ -0.32
DDX3X-215ENST00000625837 XAGE3Q8WTP9 111 aa13.02□□□□□ -0.33
DDX3X-215ENST00000625837 MYD88Q99836 296 aa13.02□□□□□ -0.33
DDX3X-215ENST00000625837 ANO2Q9NQ90 1003 aa13.02□□□□□ -0.33
DDX3X-215ENST00000625837 TTC22Q5TAA0 569 aa13.01□□□□□ -0.33
DDX3X-215ENST00000625837 CYP27B1O15528 508 aa13.01□□□□□ -0.33
DDX3X-215ENST00000625837 LARP1Q6PKG0 1096 aaKnown RBP13.01□□□□□ -0.33
DDX3X-215ENST00000625837 NALCNQ8IZF0 1738 aa13□□□□□ -0.33
DDX3X-215ENST00000625837 DTNBO60941 627 aa13□□□□□ -0.33
DDX3X-215ENST00000625837 PDE1AP54750 535 aa13□□□□□ -0.33
DDX3X-215ENST00000625837 PHKG2P15735 406 aa13□□□□□ -0.33
DDX3X-215ENST00000625837 ATP8B2P98198 1209 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms