RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 TGFB3P10600 412 aa10.64□□□□□ -0.71
CDKL5-206ENST00000623610 PHLDB3Q6NSJ2 640 aa10.64□□□□□ -0.71
CDKL5-206ENST00000623610 CC2D1AQ6P1N0 951 aaPredicted RBP10.64□□□□□ -0.71
CDKL5-206ENST00000623610 DIS3Q9Y2L1 958 aaKnown RBP10.64□□□□□ -0.71
CDKL5-206ENST00000623610 SAFB2Q14151 953 aaKnown RBP eCLIP10.64□□□□□ -0.71
CDKL5-206ENST00000623610 C1QTNF12Q5T7M4 302 aa10.64□□□□□ -0.71
CDKL5-206ENST00000623610 KANK4Q5T7N3 995 aaPredicted RBP10.64□□□□□ -0.71
CDKL5-206ENST00000623610 DRC7Q8IY82 874 aa10.64□□□□□ -0.71
CDKL5-206ENST00000623610 REPIN1Q9BWE0 567 aaKnown RBP10.64□□□□□ -0.71
CDKL5-206ENST00000623610 FRMPD1Q5SYB0 1578 aa10.64□□□□□ -0.71
CDKL5-206ENST00000623610 SCAPERQ9BY12 1400 aa10.63□□□□□ -0.71
CDKL5-206ENST00000623610 DENND4BO75064 1496 aaPredicted RBP10.63□□□□□ -0.71
CDKL5-206ENST00000623610 MAP2K5Q13163 448 aa10.63□□□□□ -0.71
CDKL5-206ENST00000623610 KCTD2Q14681 263 aa10.63□□□□□ -0.71
CDKL5-206ENST00000623610 ISY1Q9ULR0 285 aaKnown RBP10.63□□□□□ -0.71
CDKL5-206ENST00000623610 RICTORQ6R327 1708 aa10.63□□□□□ -0.71
CDKL5-206ENST00000623610 GPATCH8Q9UKJ3 1502 aaKnown RBP10.63□□□□□ -0.71
CDKL5-206ENST00000623610 LRRC9Q6ZRR7 1453 aa10.63□□□□□ -0.71
CDKL5-206ENST00000623610 BICDL2A1A5D9 508 aa10.63□□□□□ -0.71
CDKL5-206ENST00000623610 FGAP02671 866 aa10.63□□□□□ -0.71
CDKL5-206ENST00000623610 ATP2B1P20020 1258 aa10.63□□□□□ -0.71
CDKL5-206ENST00000623610 SSR1P43307 286 aaKnown RBP10.63□□□□□ -0.71
CDKL5-206ENST00000623610 HDGFL1Q5TGJ6 251 aa10.63□□□□□ -0.71
CDKL5-206ENST00000623610 ZNF746Q6NUN9 644 aaPredicted RBP10.63□□□□□ -0.71
CDKL5-206ENST00000623610 ZNF467Q7Z7K2 595 aaPredicted RBP10.63□□□□□ -0.71
CDKL5-206ENST00000623610 NGDNQ8NEJ9 315 aaKnown RBP10.63□□□□□ -0.71
CDKL5-206ENST00000623610 CCNB3Q8WWL7 1395 aa10.62□□□□□ -0.71
CDKL5-206ENST00000623610 IGHDP01880 384 aa10.62□□□□□ -0.71
CDKL5-206ENST00000623610 MAP2K1Q02750 393 aaPredicted RBP10.62□□□□□ -0.71
CDKL5-206ENST00000623610 CCDC174Q6PII3 467 aa10.62□□□□□ -0.71
CDKL5-206ENST00000623610 FBXO33Q7Z6M2 555 aa10.62□□□□□ -0.71
CDKL5-206ENST00000623610 SLC39A13Q96H72 371 aa10.62□□□□□ -0.71
CDKL5-206ENST00000623610 ZHX3Q9H4I2 956 aa10.62□□□□□ -0.71
CDKL5-206ENST00000623610 IFT122Q9HBG6 1241 aa10.62□□□□□ -0.71
CDKL5-206ENST00000623610 MAN1A1P33908 653 aa10.61□□□□□ -0.71
CDKL5-206ENST00000623610 SUPT6HQ7KZ85 1726 aaKnown RBP10.61□□□□□ -0.71
CDKL5-206ENST00000623610 NCOA2Q15596 1464 aa10.61□□□□□ -0.71
CDKL5-206ENST00000623610 MAP3K1Q13233 1512 aa10.61□□□□□ -0.71
CDKL5-206ENST00000623610 SMAPO00193 183 aa10.61□□□□□ -0.71
CDKL5-206ENST00000623610 LONRF1Q17RB8 773 aa10.61□□□□□ -0.71
CDKL5-206ENST00000623610 MTMR14Q8NCE2 650 aa10.61□□□□□ -0.71
CDKL5-206ENST00000623610 PPP1R12CQ9BZL4 782 aa10.61□□□□□ -0.71
CDKL5-206ENST00000623610 RGS3P49796 1198 aa10.6□□□□□ -0.71
CDKL5-206ENST00000623610 NEUROD1Q13562 356 aa10.6□□□□□ -0.71
CDKL5-206ENST00000623610 FBXO31Q5XUX0 539 aaPredicted RBP10.6□□□□□ -0.71
CDKL5-206ENST00000623610 TSR2Q969E8 191 aaKnown RBP10.6□□□□□ -0.71
CDKL5-206ENST00000623610 SEZ6LQ9BYH1 1024 aa10.6□□□□□ -0.71
CDKL5-206ENST00000623610 CFDP1Q9UEE9 299 aaPredicted RBP10.6□□□□□ -0.71
CDKL5-206ENST00000623610 POGZQ7Z3K3 1410 aa10.6□□□□□ -0.71
CDKL5-206ENST00000623610 DYTNA2CJ06 578 aa10.6□□□□□ -0.71
CDKL5-206ENST00000623610 HSD3B2P26439 372 aa10.6□□□□□ -0.71
CDKL5-206ENST00000623610 POU5F1BQ06416 359 aa10.6□□□□□ -0.71
CDKL5-206ENST00000623610 ODR4Q5SWX8 454 aa10.6□□□□□ -0.71
CDKL5-206ENST00000623610 RAVER1Q8IY67 606 aaKnown RBP10.6□□□□□ -0.71
CDKL5-206ENST00000623610 SVIPQ8NHG7 77 aa10.6□□□□□ -0.71
CDKL5-206ENST00000623610 HIP1RO75146 1068 aa10.59□□□□□ -0.71
CDKL5-206ENST00000623610 RRM1P23921 792 aa10.59□□□□□ -0.71
CDKL5-206ENST00000623610 ZKSCAN8Q15776 578 aaPredicted RBP10.59□□□□□ -0.71
CDKL5-206ENST00000623610 ZSCAN30Q86W11 494 aa10.59□□□□□ -0.71
CDKL5-206ENST00000623610 HSCBQ8IWL3 235 aa10.59□□□□□ -0.71
CDKL5-206ENST00000623610 AFAP1Q8N556 730 aa10.59□□□□□ -0.71
CDKL5-206ENST00000623610 TSC1Q92574 1164 aa10.59□□□□□ -0.71
CDKL5-206ENST00000623610 ARPC5LQ9BPX5 153 aa10.59□□□□□ -0.71
CDKL5-206ENST00000623610 CHST12Q9NRB3 414 aa10.59□□□□□ -0.71
CDKL5-206ENST00000623610 POLR3EQ9NVU0 708 aa10.59□□□□□ -0.71
CDKL5-206ENST00000623610 CWC25Q9NXE8 425 aaPredicted RBP10.59□□□□□ -0.71
CDKL5-206ENST00000623610 ARHGEF12Q9NZN5 1544 aa10.59□□□□□ -0.71
CDKL5-206ENST00000623610 SAMD9LQ8IVG5 1584 aa10.59□□□□□ -0.71
CDKL5-206ENST00000623610 ABCC1P33527 1531 aa10.58□□□□□ -0.72
CDKL5-206ENST00000623610 SOWAHDA6NJG2 315 aa10.58□□□□□ -0.72
CDKL5-206ENST00000623610 SKAP1Q86WV1 359 aa10.58□□□□□ -0.72
CDKL5-206ENST00000623610 CXorf56Q9H5V9 222 aa10.58□□□□□ -0.72
CDKL5-206ENST00000623610 CASS4Q9NQ75 786 aa10.58□□□□□ -0.72
CDKL5-206ENST00000623610 PDGFRBP09619 1106 aa10.58□□□□□ -0.72
CDKL5-206ENST00000623610 LMOD1P29536 600 aaPredicted RBP10.58□□□□□ -0.72
CDKL5-206ENST00000623610 SYCP2LQ5T4T6 812 aa10.58□□□□□ -0.72
CDKL5-206ENST00000623610 AGBL1Q96MI9 1066 aa10.58□□□□□ -0.72
CDKL5-206ENST00000623610 ABCF2Q9UG63 623 aa10.58□□□□□ -0.72
CDKL5-206ENST00000623610 ZNF644Q9H582 1327 aaPredicted RBP10.58□□□□□ -0.72
CDKL5-206ENST00000623610 ITSN2Q9NZM3 1697 aa10.57□□□□□ -0.72
CDKL5-206ENST00000623610 SERPINB4P48594 390 aa10.57□□□□□ -0.72
CDKL5-206ENST00000623610 TBC1D10BQ4KMP7 808 aaPredicted RBP10.57□□□□□ -0.72
CDKL5-206ENST00000623610 L1TD1Q5T7N2 865 aaKnown RBP10.57□□□□□ -0.72
CDKL5-206ENST00000623610 KANK3Q6NY19 840 aa10.57□□□□□ -0.72
CDKL5-206ENST00000623610 TRAPPC8Q9Y2L5 1435 aa10.57□□□□□ -0.72
CDKL5-206ENST00000623610 ZNF518AQ6AHZ1 1483 aa10.57□□□□□ -0.72
CDKL5-206ENST00000623610 HNRNPMP52272 730 aaKnown RBP eCLIP10.57□□□□□ -0.72
CDKL5-206ENST00000623610 AMPD3Q01432 767 aa10.57□□□□□ -0.72
CDKL5-206ENST00000623610 UVSSAQ2YD98 709 aa10.57□□□□□ -0.72
CDKL5-206ENST00000623610 THRAP3Q9Y2W1 955 aaKnown RBP10.57□□□□□ -0.72
CDKL5-206ENST00000623610 YEATS2Q9ULM3 1422 aa10.57□□□□□ -0.72
CDKL5-206ENST00000623610 ZMYM4Q5VZL5 1548 aa10.56□□□□□ -0.72
CDKL5-206ENST00000623610 SYCP2Q9BX26 1530 aa10.56□□□□□ -0.72
CDKL5-206ENST00000623610 FLT3P36888 993 aa10.56□□□□□ -0.72
CDKL5-206ENST00000623610 MAPRE1Q15691 268 aaKnown RBP10.56□□□□□ -0.72
CDKL5-206ENST00000623610 BORCS6Q96GS4 357 aa10.56□□□□□ -0.72
CDKL5-206ENST00000623610 NCKAP5LQ9HCH0 1330 aa10.56□□□□□ -0.72
CDKL5-206ENST00000623610 SYNRGQ9UMZ2 1314 aa10.56□□□□□ -0.72
CDKL5-206ENST00000623610 KDM4FA0A1W2PPD8 638 aa10.55□□□□□ -0.72
CDKL5-206ENST00000623610 VIL1P09327 827 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms