RNA–Protein interactions for RNA: ENST00000623520.1

AC016542.3-201, humanhuman

BASIC

Gene AC016542.3, Length 619 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016542.3-201ENST00000623520 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.15□□□□□ -0.78
AC016542.3-201ENST00000623520 BCL2L12Q9HB09 334 aa10.15□□□□□ -0.78
AC016542.3-201ENST00000623520 SRPK2P78362 688 aaKnown RBP10.14□□□□□ -0.79
AC016542.3-201ENST00000623520 MYSM1Q5VVJ2 828 aa10.14□□□□□ -0.79
AC016542.3-201ENST00000623520 SHPRHQ149N8 1683 aa10.14□□□□□ -0.79
AC016542.3-201ENST00000623520 PPIP5K1Q6PFW1 1433 aa10.14□□□□□ -0.79
AC016542.3-201ENST00000623520 SBNO1A3KN83 1393 aa10.14□□□□□ -0.79
AC016542.3-201ENST00000623520 PNPLA6Q8IY17 1366 aa10.14□□□□□ -0.79
AC016542.3-201ENST00000623520 RCCD1A6NED2 376 aa10.13□□□□□ -0.79
AC016542.3-201ENST00000623520 PTPREP23469 700 aa10.13□□□□□ -0.79
AC016542.3-201ENST00000623520 PMFBP1Q8TBY8 1022 aa10.13□□□□□ -0.79
AC016542.3-201ENST00000623520 LRRC59Q96AG4 307 aaKnown RBP10.13□□□□□ -0.79
AC016542.3-201ENST00000623520 EYA1Q99502 592 aa10.13□□□□□ -0.79
AC016542.3-201ENST00000623520 SPATA31A3Q5VYP0 1347 aa10.12□□□□□ -0.79
AC016542.3-201ENST00000623520 PPP1R3GB7ZBB8 358 aa10.12□□□□□ -0.79
AC016542.3-201ENST00000623520 EIF4G2P78344 907 aaKnown RBP eCLIP10.12□□□□□ -0.79
AC016542.3-201ENST00000623520 DIXDC1Q155Q3 683 aa10.12□□□□□ -0.79
AC016542.3-201ENST00000623520 KRT28Q7Z3Y7 464 aa10.12□□□□□ -0.79
AC016542.3-201ENST00000623520 TBC1D2Q9BYX2 928 aa10.12□□□□□ -0.79
AC016542.3-201ENST00000623520 TSKSQ9UJT2 592 aa10.12□□□□□ -0.79
AC016542.3-201ENST00000623520 TNS3Q68CZ2 1445 aa10.12□□□□□ -0.79
AC016542.3-201ENST00000623520 TRPM3Q9HCF6 1732 aaPredicted RBP10.12□□□□□ -0.79
AC016542.3-201ENST00000623520 BRD4O60885 1362 aaPredicted RBP10.12□□□□□ -0.79
AC016542.3-201ENST00000623520 COL22A1Q8NFW1 1626 aaPredicted RBP10.11□□□□□ -0.79
AC016542.3-201ENST00000623520 ACEP12821 1306 aa10.11□□□□□ -0.79
AC016542.3-201ENST00000623520 SPATA31A6Q5VVP1 1343 aa10.11□□□□□ -0.79
AC016542.3-201ENST00000623520 CPSF1Q10570 1443 aaKnown RBP10.11□□□□□ -0.79
AC016542.3-201ENST00000623520 SSH2Q76I76 1423 aa10.11□□□□□ -0.79
AC016542.3-201ENST00000623520 HSPA5P11021 654 aaKnown RBP10.11□□□□□ -0.79
AC016542.3-201ENST00000623520 XPCQ01831 940 aaPredicted RBP10.11□□□□□ -0.79
AC016542.3-201ENST00000623520 NGDNQ8NEJ9 315 aaKnown RBP10.11□□□□□ -0.79
AC016542.3-201ENST00000623520 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.11□□□□□ -0.79
AC016542.3-201ENST00000623520 NINLQ9Y2I6 1382 aa10.11□□□□□ -0.79
AC016542.3-201ENST00000623520 A6NJR5 290 aa10.1□□□□□ -0.79
AC016542.3-201ENST00000623520 CLK2P49760 499 aaKnown RBP10.1□□□□□ -0.79
AC016542.3-201ENST00000623520 TMF1P82094 1093 aa10.1□□□□□ -0.79
AC016542.3-201ENST00000623520 PSME1Q06323 249 aa10.1□□□□□ -0.79
AC016542.3-201ENST00000623520 MCM6Q14566 821 aa10.1□□□□□ -0.79
AC016542.3-201ENST00000623520 NUDT18Q6ZVK8 323 aa10.1□□□□□ -0.79
AC016542.3-201ENST00000623520 CLUAP1Q96AJ1 413 aa10.1□□□□□ -0.79
AC016542.3-201ENST00000623520 CABP1Q9NZU7 370 aa10.1□□□□□ -0.79
AC016542.3-201ENST00000623520 ARHGEF10O15013 1369 aa10.1□□□□□ -0.79
AC016542.3-201ENST00000623520 CD163L1Q9NR16 1453 aa10.1□□□□□ -0.79
AC016542.3-201ENST00000623520 MED1Q15648 1581 aaPredicted RBP10.09□□□□□ -0.79
AC016542.3-201ENST00000623520 ALS2Q96Q42 1657 aa10.09□□□□□ -0.79
AC016542.3-201ENST00000623520 USP6P35125 1406 aa10.09□□□□□ -0.79
AC016542.3-201ENST00000623520 LRP6O75581 1613 aa10.09□□□□□ -0.79
AC016542.3-201ENST00000623520 PNMA3Q9UL41 463 aa10.09□□□□□ -0.79
AC016542.3-201ENST00000623520 TRIM6-TRIM34B2RNG4 842 aa10.08□□□□□ -0.8
AC016542.3-201ENST00000623520 NBPF26B4DH59 902 aa10.08□□□□□ -0.8
AC016542.3-201ENST00000623520 HOXB1P14653 301 aaPredicted RBP10.08□□□□□ -0.8
AC016542.3-201ENST00000623520 CDCA8Q53HL2 280 aa10.08□□□□□ -0.8
AC016542.3-201ENST00000623520 TATDN2Q93075 761 aa10.08□□□□□ -0.8
AC016542.3-201ENST00000623520 C1orf115Q9H7X2 142 aa10.08□□□□□ -0.8
AC016542.3-201ENST00000623520 AKAP12Q02952 1782 aa10.07□□□□□ -0.8
AC016542.3-201ENST00000623520 NRKQ7Z2Y5 1582 aa10.07□□□□□ -0.8
AC016542.3-201ENST00000623520 C3orf80F5H4A9 247 aa10.07□□□□□ -0.8
AC016542.3-201ENST00000623520 CD46P15529 392 aa10.07□□□□□ -0.8
AC016542.3-201ENST00000623520 DNAJB2P25686 324 aa10.07□□□□□ -0.8
AC016542.3-201ENST00000623520 PACS2Q86VP3 889 aa10.07□□□□□ -0.8
AC016542.3-201ENST00000623520 SULF1Q8IWU6 871 aa10.07□□□□□ -0.8
AC016542.3-201ENST00000623520 SPIRE2Q8WWL2 714 aa10.07□□□□□ -0.8
AC016542.3-201ENST00000623520 MON2Q7Z3U7 1717 aa10.07□□□□□ -0.8
AC016542.3-201ENST00000623520 A0A1W2PP64 1363 aa10.06□□□□□ -0.8
AC016542.3-201ENST00000623520 APBB1O00213 710 aa10.06□□□□□ -0.8
AC016542.3-201ENST00000623520 SLC12A5Q9H2X9 1139 aa10.06□□□□□ -0.8
AC016542.3-201ENST00000623520 ANKRD36BQ8N2N9 1353 aa10.05□□□□□ -0.8
AC016542.3-201ENST00000623520 DDX11L8A8MPP1 907 aa10.05□□□□□ -0.8
AC016542.3-201ENST00000623520 TRAK2O60296 914 aa10.05□□□□□ -0.8
AC016542.3-201ENST00000623520 RIC3Q7Z5B4 369 aa10.05□□□□□ -0.8
AC016542.3-201ENST00000623520 ARID3AQ99856 593 aa10.05□□□□□ -0.8
AC016542.3-201ENST00000623520 LIMD1Q9UGP4 676 aa10.05□□□□□ -0.8
AC016542.3-201ENST00000623520 EDC4Q6P2E9 1401 aaKnown RBP10.05□□□□□ -0.8
AC016542.3-201ENST00000623520 MYOM1P52179 1685 aa10.05□□□□□ -0.8
AC016542.3-201ENST00000623520 USP19O94966 1318 aa10.05□□□□□ -0.8
AC016542.3-201ENST00000623520 ABCA3Q99758 1704 aa10.04□□□□□ -0.8
AC016542.3-201ENST00000623520 CRYBG1Q9Y4K1 1723 aa10.04□□□□□ -0.8
AC016542.3-201ENST00000623520 KTN1Q86UP2 1357 aaKnown RBP10.04□□□□□ -0.8
AC016542.3-201ENST00000623520 NUTM1Q86Y26 1132 aa10.04□□□□□ -0.8
AC016542.3-201ENST00000623520 TMC1Q8TDI8 760 aa10.04□□□□□ -0.8
AC016542.3-201ENST00000623520 TERF2IPQ9NYB0 399 aa10.04□□□□□ -0.8
AC016542.3-201ENST00000623520 TTC21BQ7Z4L5 1316 aa10.04□□□□□ -0.8
AC016542.3-201ENST00000623520 TTC21AQ8NDW8 1320 aa10.04□□□□□ -0.8
AC016542.3-201ENST00000623520 PIK3C2AO00443 1686 aa10.03□□□□□ -0.8
AC016542.3-201ENST00000623520 C11orf95C9JLR9 678 aaPredicted RBP10.03□□□□□ -0.8
AC016542.3-201ENST00000623520 ZEB1P37275 1124 aaPredicted RBP10.03□□□□□ -0.8
AC016542.3-201ENST00000623520 RFC5P40937 340 aa10.03□□□□□ -0.8
AC016542.3-201ENST00000623520 HDGFL2Q7Z4V5 671 aaPredicted RBP10.03□□□□□ -0.8
AC016542.3-201ENST00000623520 TMEM134Q9H6X4 195 aa10.03□□□□□ -0.8
AC016542.3-201ENST00000623520 PROX2Q3B8N5 592 aa10.02□□□□□ -0.81
AC016542.3-201ENST00000623520 BANK1Q8NDB2 785 aa10.02□□□□□ -0.81
AC016542.3-201ENST00000623520 KCNK17Q96T54 332 aa10.02□□□□□ -0.81
AC016542.3-201ENST00000623520 USP54Q70EL1 1684 aa10.02□□□□□ -0.81
AC016542.3-201ENST00000623520 SLIT3O75094 1523 aa10.02□□□□□ -0.81
AC016542.3-201ENST00000623520 USP31Q70CQ4 1352 aa10.01□□□□□ -0.81
AC016542.3-201ENST00000623520 PHRF1Q9P1Y6 1649 aaKnown RBP10.01□□□□□ -0.81
AC016542.3-201ENST00000623520 SPDYE5A6NIY4 337 aa10.01□□□□□ -0.81
AC016542.3-201ENST00000623520 NUTM2BA6NNL0 878 aaPredicted RBP10.01□□□□□ -0.81
AC016542.3-201ENST00000623520 NUTM2EB1AL46 878 aaPredicted RBP10.01□□□□□ -0.81
AC016542.3-201ENST00000623520 SMAPO00193 183 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms