RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 MAP7D2Q96T17 732 aa19.09■□□□□ 0.65
GABRB3-215ENST00000622697 PTPRCP08575 1304 aa19.09■□□□□ 0.65
GABRB3-215ENST00000622697 IDH1O75874 414 aaKnown RBP19.08■□□□□ 0.64
GABRB3-215ENST00000622697 GUCY1B3Q02153 619 aa19.08■□□□□ 0.64
GABRB3-215ENST00000622697 ANKRD36BQ8N2N9 1353 aa19.08■□□□□ 0.64
GABRB3-215ENST00000622697 ACEP12821 1306 aa19.08■□□□□ 0.64
GABRB3-215ENST00000622697 SDSP20132 328 aa19.07■□□□□ 0.64
GABRB3-215ENST00000622697 MAP3K11Q16584 847 aa19.07■□□□□ 0.64
GABRB3-215ENST00000622697 TSPYL6Q8N831 410 aa19.07■□□□□ 0.64
GABRB3-215ENST00000622697 CCDC69A6NI79 296 aa19.07■□□□□ 0.64
GABRB3-215ENST00000622697 CFAP45Q9UL16 551 aa19.07■□□□□ 0.64
GABRB3-215ENST00000622697 IL16Q14005 1332 aa19.07■□□□□ 0.64
GABRB3-215ENST00000622697 PPFIA3O75145 1194 aa19.07■□□□□ 0.64
GABRB3-215ENST00000622697 MTERF4Q7Z6M4 381 aaKnown RBP19.07■□□□□ 0.64
GABRB3-215ENST00000622697 JARID2Q92833 1246 aaPredicted RBP19.07■□□□□ 0.64
GABRB3-215ENST00000622697 KRT32Q14532 448 aa19.07■□□□□ 0.64
GABRB3-215ENST00000622697 MPHOSPH8Q99549 860 aa19.07■□□□□ 0.64
GABRB3-215ENST00000622697 PPP1R42Q7Z4L9 355 aa19.06■□□□□ 0.64
GABRB3-215ENST00000622697 KCNH5Q8NCM2 988 aa19.06■□□□□ 0.64
GABRB3-215ENST00000622697 TRAPPC8Q9Y2L5 1435 aa19.06■□□□□ 0.64
GABRB3-215ENST00000622697 JMYQ8N9B5 988 aa19.06■□□□□ 0.64
GABRB3-215ENST00000622697 PIBF1Q8WXW3 757 aa19.06■□□□□ 0.64
GABRB3-215ENST00000622697 KRT24Q2M2I5 525 aa19.05■□□□□ 0.64
GABRB3-215ENST00000622697 TCEAL9Q9UHQ7 104 aa19.05■□□□□ 0.64
GABRB3-215ENST00000622697 CCDC112Q8NEF3 446 aa19.05■□□□□ 0.64
GABRB3-215ENST00000622697 USP25Q9UHP3 1055 aa19.05■□□□□ 0.64
GABRB3-215ENST00000622697 PZPP20742 1482 aa19.05■□□□□ 0.64
GABRB3-215ENST00000622697 PI4KAP2A4QPH2 592 aa19.05■□□□□ 0.64
GABRB3-215ENST00000622697 PI4KAP1Q8N8J0 262 aa19.05■□□□□ 0.64
GABRB3-215ENST00000622697 CKAP2LQ8IYA6 745 aa19.05■□□□□ 0.64
GABRB3-215ENST00000622697 TRIM22Q8IYM9 498 aa19.05■□□□□ 0.64
GABRB3-215ENST00000622697 LARP1Q6PKG0 1096 aaKnown RBP19.05■□□□□ 0.64
GABRB3-215ENST00000622697 MRPL50Q8N5N7 158 aaKnown RBP19.05■□□□□ 0.64
GABRB3-215ENST00000622697 LIMCH1Q9UPQ0 1083 aa19.05■□□□□ 0.64
GABRB3-215ENST00000622697 MAP3K2Q9Y2U5 619 aa19.04■□□□□ 0.64
GABRB3-215ENST00000622697 PANK2Q9BZ23 570 aa19.04■□□□□ 0.64
GABRB3-215ENST00000622697 PHF8Q9UPP1 1060 aa19.04■□□□□ 0.64
GABRB3-215ENST00000622697 PLCH2O75038 1416 aa19.04■□□□□ 0.64
GABRB3-215ENST00000622697 TFIP11Q9UBB9 837 aaKnown RBP19.04■□□□□ 0.64
GABRB3-215ENST00000622697 ITSN2Q9NZM3 1697 aa19.03■□□□□ 0.64
GABRB3-215ENST00000622697 CCDC183Q5T5S1 534 aa19.03■□□□□ 0.64
GABRB3-215ENST00000622697 CAGE1Q8TC20 777 aa19.03■□□□□ 0.64
GABRB3-215ENST00000622697 NACAP1Q9BZK3 213 aa19.03■□□□□ 0.64
GABRB3-215ENST00000622697 DMRT2Q9Y5R5 561 aa19.03■□□□□ 0.64
GABRB3-215ENST00000622697 DUOX2Q9NRD8 1548 aa19.03■□□□□ 0.64
GABRB3-215ENST00000622697 MEX3CQ5U5Q3 659 aaKnown RBP19.03■□□□□ 0.64
GABRB3-215ENST00000622697 TDO2P48775 406 aa19.03■□□□□ 0.64
GABRB3-215ENST00000622697 WDR62O43379 1518 aa19.03■□□□□ 0.64
GABRB3-215ENST00000622697 POLKQ9UBT6 870 aa19.02■□□□□ 0.64
GABRB3-215ENST00000622697 FILIP1LQ4L180 1135 aa19.02■□□□□ 0.64
GABRB3-215ENST00000622697 CEP57L1Q8IYX8 460 aa19.02■□□□□ 0.64
GABRB3-215ENST00000622697 PHACTR3Q96KR7 559 aa19.02■□□□□ 0.64
GABRB3-215ENST00000622697 CTNNA3Q9UI47 895 aa19.02■□□□□ 0.64
GABRB3-215ENST00000622697 POLR3AO14802 1390 aaPredicted RBP19.02■□□□□ 0.64
GABRB3-215ENST00000622697 DBF4Q9UBU7 674 aaPredicted RBP19.02■□□□□ 0.63
GABRB3-215ENST00000622697 GJB2P29033 226 aa19.01■□□□□ 0.63
GABRB3-215ENST00000622697 NUP160Q12769 1436 aa19.01■□□□□ 0.63
GABRB3-215ENST00000622697 CCT2P78371 535 aaKnown RBP19.01■□□□□ 0.63
GABRB3-215ENST00000622697 IMMTQ16891 758 aaKnown RBP19.01■□□□□ 0.63
GABRB3-215ENST00000622697 IKQ13123 557 aaPredicted RBP19.01■□□□□ 0.63
GABRB3-215ENST00000622697 HSP90B2PQ58FF3 399 aa19.01■□□□□ 0.63
GABRB3-215ENST00000622697 METTL24Q5JXM2 366 aa19.01■□□□□ 0.63
GABRB3-215ENST00000622697 TMX3Q96JJ7 454 aa19■□□□□ 0.63
GABRB3-215ENST00000622697 IFIT1P09914 478 aaKnown RBP19■□□□□ 0.63
GABRB3-215ENST00000622697 CTDP1Q9Y5B0 961 aaPredicted RBP19■□□□□ 0.63
GABRB3-215ENST00000622697 ATP5J2-PTCD1G3V325 749 aa19■□□□□ 0.63
GABRB3-215ENST00000622697 ARHGAP45Q92619 1136 aa19■□□□□ 0.63
GABRB3-215ENST00000622697 DENND4BO75064 1496 aaPredicted RBP19■□□□□ 0.63
GABRB3-215ENST00000622697 NUTM2BA6NNL0 878 aaPredicted RBP19■□□□□ 0.63
GABRB3-215ENST00000622697 NUTM2EB1AL46 878 aaPredicted RBP19■□□□□ 0.63
GABRB3-215ENST00000622697 NUTM2AQ8IVF1 878 aaPredicted RBP19■□□□□ 0.63
GABRB3-215ENST00000622697 GNL3LQ9NVN8 582 aaKnown RBP19■□□□□ 0.63
GABRB3-215ENST00000622697 XRCC6P12956 609 aaKnown RBP eCLIP18.99■□□□□ 0.63
GABRB3-215ENST00000622697 ZSCAN25Q6NSZ9 544 aa18.99■□□□□ 0.63
GABRB3-215ENST00000622697 ECHDC1Q9NTX5 307 aa18.99■□□□□ 0.63
GABRB3-215ENST00000622697 OFD1O75665 1012 aa18.99■□□□□ 0.63
GABRB3-215ENST00000622697 EPS15P42566 896 aa18.99■□□□□ 0.63
GABRB3-215ENST00000622697 BICDL1Q6ZP65 573 aa18.99■□□□□ 0.63
GABRB3-215ENST00000622697 RUFY1Q96T51 708 aa18.99■□□□□ 0.63
GABRB3-215ENST00000622697 A0A087WZG4 1122 aa18.99■□□□□ 0.63
GABRB3-215ENST00000622697 CCDC82Q8N4S0 544 aa18.99■□□□□ 0.63
GABRB3-215ENST00000622697 KIAA0556O60303 1618 aa18.99■□□□□ 0.63
GABRB3-215ENST00000622697 TXLNAP40222 546 aa18.99■□□□□ 0.63
GABRB3-215ENST00000622697 RAI14Q9P0K7 980 aa18.99■□□□□ 0.63
GABRB3-215ENST00000622697 TTC21BQ7Z4L5 1316 aa18.98■□□□□ 0.63
GABRB3-215ENST00000622697 STX6O43752 255 aa18.98■□□□□ 0.63
GABRB3-215ENST00000622697 SLC3A2P08195 630 aaKnown RBP18.98■□□□□ 0.63
GABRB3-215ENST00000622697 ZSCAN23Q3MJ62 389 aa18.98■□□□□ 0.63
GABRB3-215ENST00000622697 AMOTQ4VCS5 1084 aa18.98■□□□□ 0.63
GABRB3-215ENST00000622697 SH2B1Q9NRF2 756 aaPredicted RBP18.98■□□□□ 0.63
GABRB3-215ENST00000622697 LRP2BPQ9P2M1 347 aa18.98■□□□□ 0.63
GABRB3-215ENST00000622697 ABCF2Q9UG63 623 aa18.98■□□□□ 0.63
GABRB3-215ENST00000622697 NCKAP5LQ9HCH0 1330 aa18.98■□□□□ 0.63
GABRB3-215ENST00000622697 PDE1AP54750 535 aa18.98■□□□□ 0.63
GABRB3-215ENST00000622697 ATP2B2Q01814 1243 aa18.98■□□□□ 0.63
GABRB3-215ENST00000622697 AIDAQ96BJ3 306 aa18.98■□□□□ 0.63
GABRB3-215ENST00000622697 PATL2C9JE40 543 aaKnown RBP18.98■□□□□ 0.63
GABRB3-215ENST00000622697 TCEANC2Q96MN5 208 aa18.98■□□□□ 0.63
GABRB3-215ENST00000622697 U3KPZ7 1027 aaPredicted RBP18.98■□□□□ 0.63
GABRB3-215ENST00000622697 VAMP4O75379 141 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms