RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 TNNT3P45378 269 aaPredicted RBP9.05□□□□□ -0.96
TRIM49B-202ENST00000622138 WAPLQ7Z5K2 1190 aa9.05□□□□□ -0.96
TRIM49B-202ENST00000622138 NOP2P46087 812 aaKnown RBP9.04□□□□□ -0.96
TRIM49B-202ENST00000622138 ALDH1L2Q3SY69 923 aa9.04□□□□□ -0.96
TRIM49B-202ENST00000622138 KIF18AQ8NI77 898 aa9.04□□□□□ -0.96
TRIM49B-202ENST00000622138 NCAPGQ9BPX3 1015 aa9.04□□□□□ -0.96
TRIM49B-202ENST00000622138 TSPY26PQ9H489 355 aa9.04□□□□□ -0.96
TRIM49B-202ENST00000622138 FAM53CQ9NYF3 392 aa9.04□□□□□ -0.96
TRIM49B-202ENST00000622138 ZRANB1Q9UGI0 708 aa9.04□□□□□ -0.96
TRIM49B-202ENST00000622138 EMILIN1Q9Y6C2 1016 aa9.04□□□□□ -0.96
TRIM49B-202ENST00000622138 MAP2P11137 1827 aaKnown RBP9.04□□□□□ -0.96
TRIM49B-202ENST00000622138 PTCH1Q13635 1447 aa9.04□□□□□ -0.96
TRIM49B-202ENST00000622138 PIK3R4Q99570 1358 aa9.03□□□□□ -0.96
TRIM49B-202ENST00000622138 FAM177BA6PVY3 158 aa9.03□□□□□ -0.96
TRIM49B-202ENST00000622138 FCHSD2O94868 740 aa9.03□□□□□ -0.96
TRIM49B-202ENST00000622138 RAD51AP2Q09MP3 1159 aa9.03□□□□□ -0.96
TRIM49B-202ENST00000622138 CHD1LQ86WJ1 897 aa9.03□□□□□ -0.96
TRIM49B-202ENST00000622138 MRPL50Q8N5N7 158 aaKnown RBP9.03□□□□□ -0.96
TRIM49B-202ENST00000622138 RASSF4Q9H2L5 321 aa9.03□□□□□ -0.96
TRIM49B-202ENST00000622138 ATP7BP35670 1465 aa9.03□□□□□ -0.96
TRIM49B-202ENST00000622138 KNDC1Q76NI1 1749 aa9.03□□□□□ -0.96
TRIM49B-202ENST00000622138 IPO8O15397 1037 aaKnown RBP9.03□□□□□ -0.96
TRIM49B-202ENST00000622138 VAMP4O75379 141 aa9.03□□□□□ -0.96
TRIM49B-202ENST00000622138 REC8O95072 547 aa9.03□□□□□ -0.96
TRIM49B-202ENST00000622138 GTF2A1P52655 376 aaPredicted RBP9.03□□□□□ -0.96
TRIM49B-202ENST00000622138 NFE2L2Q16236 605 aa9.03□□□□□ -0.96
TRIM49B-202ENST00000622138 GRIPAP1Q4V328 841 aa9.03□□□□□ -0.96
TRIM49B-202ENST00000622138 SIRT2Q8IXJ6 389 aa9.03□□□□□ -0.96
TRIM49B-202ENST00000622138 ELL2O00472 640 aaPredicted RBP9.02□□□□□ -0.97
TRIM49B-202ENST00000622138 ZBTB7BO15156 539 aaPredicted RBP9.02□□□□□ -0.97
TRIM49B-202ENST00000622138 CD2BP2O95400 341 aaKnown RBP9.02□□□□□ -0.97
TRIM49B-202ENST00000622138 CYP2C19P33261 490 aa9.02□□□□□ -0.97
TRIM49B-202ENST00000622138 BRPF1P55201 1214 aaPredicted RBP9.02□□□□□ -0.97
TRIM49B-202ENST00000622138 LMOD3Q0VAK6 560 aa9.02□□□□□ -0.97
TRIM49B-202ENST00000622138 MUM1L1Q5H9M0 696 aa9.02□□□□□ -0.97
TRIM49B-202ENST00000622138 NME9Q86XW9 330 aa9.02□□□□□ -0.97
TRIM49B-202ENST00000622138 OSCARQ8IYS5 282 aa9.02□□□□□ -0.97
TRIM49B-202ENST00000622138 GPT2Q8TD30 523 aa9.02□□□□□ -0.97
TRIM49B-202ENST00000622138 SYAP1Q96A49 352 aaPredicted RBP9.02□□□□□ -0.97
TRIM49B-202ENST00000622138 KIF2CQ99661 725 aa9.02□□□□□ -0.97
TRIM49B-202ENST00000622138 DLG5Q8TDM6 1919 aa9.02□□□□□ -0.97
TRIM49B-202ENST00000622138 DLC1Q96QB1 1528 aa9.02□□□□□ -0.97
TRIM49B-202ENST00000622138 SYCE3A1L190 88 aa9.02□□□□□ -0.97
TRIM49B-202ENST00000622138 SMTNL1A8MU46 457 aa9.02□□□□□ -0.97
TRIM49B-202ENST00000622138 PHF14O94880 888 aa9.02□□□□□ -0.97
TRIM49B-202ENST00000622138 ICE2Q659A1 982 aa9.02□□□□□ -0.97
TRIM49B-202ENST00000622138 GAS2L2Q8NHY3 880 aa9.02□□□□□ -0.97
TRIM49B-202ENST00000622138 CARD10Q9BWT7 1032 aa9.02□□□□□ -0.97
TRIM49B-202ENST00000622138 MBIPQ9NS73 344 aa9.02□□□□□ -0.97
TRIM49B-202ENST00000622138 TMEM63CQ9P1W3 806 aa9.02□□□□□ -0.97
TRIM49B-202ENST00000622138 CPS1P31327 1500 aa9.01□□□□□ -0.97
TRIM49B-202ENST00000622138 ERICH4A6NGS2 130 aa9.01□□□□□ -0.97
TRIM49B-202ENST00000622138 DHX16O60231 1041 aaKnown RBP9.01□□□□□ -0.97
TRIM49B-202ENST00000622138 IL13P35225 146 aa9.01□□□□□ -0.97
TRIM49B-202ENST00000622138 ZNF397Q8NF99 534 aaPredicted RBP9.01□□□□□ -0.97
TRIM49B-202ENST00000622138 SIRT1Q96EB6 747 aa9.01□□□□□ -0.97
TRIM49B-202ENST00000622138 RSPH14Q9UHP6 348 aa9.01□□□□□ -0.97
TRIM49B-202ENST00000622138 A2ML1A8K2U0 1454 aa9.01□□□□□ -0.97
TRIM49B-202ENST00000622138 ABCC4O15439 1325 aa9.01□□□□□ -0.97
TRIM49B-202ENST00000622138 NCKAP5LQ9HCH0 1330 aa9.01□□□□□ -0.97
TRIM49B-202ENST00000622138 NRXN3Q9Y4C0 1643 aa9.01□□□□□ -0.97
TRIM49B-202ENST00000622138 CDK12Q9NYV4 1490 aaPredicted RBP9□□□□□ -0.97
TRIM49B-202ENST00000622138 GOLGA6L6A8MZA4 724 aa9□□□□□ -0.97
TRIM49B-202ENST00000622138 ZNF853P0CG23 659 aa9□□□□□ -0.97
TRIM49B-202ENST00000622138 BMP2KLQ5H9B9 411 aa9□□□□□ -0.97
TRIM49B-202ENST00000622138 ANKRD45Q5TZF3 282 aa9□□□□□ -0.97
TRIM49B-202ENST00000622138 KIAA1524Q8TCG1 905 aa9□□□□□ -0.97
TRIM49B-202ENST00000622138 SLC26A8Q96RN1 970 aa9□□□□□ -0.97
TRIM49B-202ENST00000622138 CWC22Q9HCG8 908 aaKnown RBP9□□□□□ -0.97
TRIM49B-202ENST00000622138 RBM27Q9P2N5 1060 aaKnown RBP9□□□□□ -0.97
TRIM49B-202ENST00000622138 CPSF1Q10570 1443 aaKnown RBP9□□□□□ -0.97
TRIM49B-202ENST00000622138 FAM83GA6ND36 823 aa9□□□□□ -0.97
TRIM49B-202ENST00000622138 HAP1P54257 671 aaPredicted RBP9□□□□□ -0.97
TRIM49B-202ENST00000622138 C8orf58Q8NAV2 365 aa9□□□□□ -0.97
TRIM49B-202ENST00000622138 CEP83Q9Y592 693 aa9□□□□□ -0.97
TRIM49B-202ENST00000622138 LOC102724159A0A0B4J2E5 919 aa8.99□□□□□ -0.97
TRIM49B-202ENST00000622138 GUCY2CP25092 1073 aa8.99□□□□□ -0.97
TRIM49B-202ENST00000622138 HNRNPH2P55795 449 aaKnown RBP8.99□□□□□ -0.97
TRIM49B-202ENST00000622138 PWP2Q15269 919 aaKnown RBP8.99□□□□□ -0.97
TRIM49B-202ENST00000622138 SLFNL1Q499Z3 407 aa8.99□□□□□ -0.97
TRIM49B-202ENST00000622138 TBC1D9Q6ZT07 1266 aa8.99□□□□□ -0.97
TRIM49B-202ENST00000622138 CHMP4CQ96CF2 233 aa8.99□□□□□ -0.97
TRIM49B-202ENST00000622138 RBM42Q9BTD8 480 aaKnown RBP8.99□□□□□ -0.97
TRIM49B-202ENST00000622138 IFT57Q9NWB7 429 aa8.99□□□□□ -0.97
TRIM49B-202ENST00000622138 EDC4Q6P2E9 1401 aaKnown RBP8.99□□□□□ -0.97
TRIM49B-202ENST00000622138 RIMS2Q9UQ26 1411 aa8.99□□□□□ -0.97
TRIM49B-202ENST00000622138 DCTN1Q14203 1278 aa8.99□□□□□ -0.97
TRIM49B-202ENST00000622138 RRS1Q15050 365 aaKnown RBP8.99□□□□□ -0.97
TRIM49B-202ENST00000622138 BANK1Q8NDB2 785 aa8.99□□□□□ -0.97
TRIM49B-202ENST00000622138 FOXD4L1Q9NU39 408 aa8.99□□□□□ -0.97
TRIM49B-202ENST00000622138 MON2Q7Z3U7 1717 aa8.98□□□□□ -0.97
TRIM49B-202ENST00000622138 CCDC172P0C7W6 258 aa8.98□□□□□ -0.97
TRIM49B-202ENST00000622138 CASQ1P31415 396 aa8.98□□□□□ -0.97
TRIM49B-202ENST00000622138 TXLNBQ8N3L3 684 aa8.98□□□□□ -0.97
TRIM49B-202ENST00000622138 ZBTB9Q96C00 473 aa8.98□□□□□ -0.97
TRIM49B-202ENST00000622138 KIF1BPQ96EK5 621 aa8.98□□□□□ -0.97
TRIM49B-202ENST00000622138 TTC12Q9H892 705 aaPredicted RBP8.98□□□□□ -0.97
TRIM49B-202ENST00000622138 STAG3Q9UJ98 1225 aa8.98□□□□□ -0.97
TRIM49B-202ENST00000622138 METP08581 1390 aa8.98□□□□□ -0.97
TRIM49B-202ENST00000622138 PRPF40AO75400 957 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms