RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 KCNH5Q8NCM2 988 aa11.67□□□□□ -0.54
PDPN-212ENST00000621990 USP26Q9BXU7 913 aa11.67□□□□□ -0.54
PDPN-212ENST00000621990 TRPM3Q9HCF6 1732 aaPredicted RBP11.67□□□□□ -0.54
PDPN-212ENST00000621990 LMTK3Q96Q04 1460 aa11.67□□□□□ -0.54
PDPN-212ENST00000621990 SMARCA5O60264 1052 aaPredicted RBP11.66□□□□□ -0.54
PDPN-212ENST00000621990 OVOS2A0A0G2JMS6 1433 aa11.66□□□□□ -0.54
PDPN-212ENST00000621990 HOXB7P09629 217 aa11.66□□□□□ -0.54
PDPN-212ENST00000621990 HSP90AB1P08238 724 aaKnown RBP11.66□□□□□ -0.54
PDPN-212ENST00000621990 FKBP5Q13451 457 aaPredicted RBP11.66□□□□□ -0.54
PDPN-212ENST00000621990 RAB3GAP1Q15042 981 aa11.66□□□□□ -0.54
PDPN-212ENST00000621990 RABEP1Q15276 862 aa11.66□□□□□ -0.54
PDPN-212ENST00000621990 MST1RQ04912 1400 aa11.65□□□□□ -0.54
PDPN-212ENST00000621990 IBTKQ9P2D0 1353 aaPredicted RBP11.65□□□□□ -0.54
PDPN-212ENST00000621990 NPHP4O75161 1426 aaPredicted RBP11.65□□□□□ -0.54
PDPN-212ENST00000621990 DDX11L8A8MPP1 907 aa11.65□□□□□ -0.54
PDPN-212ENST00000621990 ATP8B2P98198 1209 aa11.65□□□□□ -0.54
PDPN-212ENST00000621990 NBPF6Q5VWK0 638 aa11.65□□□□□ -0.54
PDPN-212ENST00000621990 IL27Q8NEV9 243 aa11.65□□□□□ -0.54
PDPN-212ENST00000621990 NBPF4Q96M43 638 aa11.65□□□□□ -0.54
PDPN-212ENST00000621990 PDE1AP54750 535 aa11.65□□□□□ -0.55
PDPN-212ENST00000621990 CASC1Q6TDU7 716 aa11.65□□□□□ -0.55
PDPN-212ENST00000621990 LTV1Q96GA3 475 aaPredicted RBP11.65□□□□□ -0.55
PDPN-212ENST00000621990 ADAMTS7Q9UKP4 1686 aa11.64□□□□□ -0.55
PDPN-212ENST00000621990 RBM42Q9BTD8 480 aaKnown RBP11.64□□□□□ -0.55
PDPN-212ENST00000621990 BRPF3Q9ULD4 1205 aa11.64□□□□□ -0.55
PDPN-212ENST00000621990 USHBP1Q8N6Y0 703 aa11.64□□□□□ -0.55
PDPN-212ENST00000621990 KIF1AQ12756 1690 aa11.64□□□□□ -0.55
PDPN-212ENST00000621990 SIPA1L3O60292 1781 aaPredicted RBP11.63□□□□□ -0.55
PDPN-212ENST00000621990 EIF4A1P60842 406 aaKnown RBP11.63□□□□□ -0.55
PDPN-212ENST00000621990 PSME1Q06323 249 aa11.63□□□□□ -0.55
PDPN-212ENST00000621990 CLEC17AQ6ZS10 378 aa11.63□□□□□ -0.55
PDPN-212ENST00000621990 USP44Q9H0E7 712 aa11.63□□□□□ -0.55
PDPN-212ENST00000621990 FSD2A1L4K1 749 aa11.63□□□□□ -0.55
PDPN-212ENST00000621990 ESCO1Q5FWF5 840 aa11.63□□□□□ -0.55
PDPN-212ENST00000621990 HDGFL1Q5TGJ6 251 aa11.63□□□□□ -0.55
PDPN-212ENST00000621990 TNPO1Q92973 898 aaKnown RBP11.63□□□□□ -0.55
PDPN-212ENST00000621990 CHMP4AQ9BY43 222 aa11.63□□□□□ -0.55
PDPN-212ENST00000621990 PNMA6EA0A0J9YXQ4 647 aa11.62□□□□□ -0.55
PDPN-212ENST00000621990 REC8O95072 547 aa11.62□□□□□ -0.55
PDPN-212ENST00000621990 LRRCC1Q9C099 1032 aa11.62□□□□□ -0.55
PDPN-212ENST00000621990 STAP2Q9UGK3 403 aa11.62□□□□□ -0.55
PDPN-212ENST00000621990 TRAK2O60296 914 aa11.62□□□□□ -0.55
PDPN-212ENST00000621990 AKAP4Q5JQC9 854 aa11.62□□□□□ -0.55
PDPN-212ENST00000621990 C14orf37Q86TY3 774 aa11.62□□□□□ -0.55
PDPN-212ENST00000621990 ARHGEF25Q86VW2 580 aa11.62□□□□□ -0.55
PDPN-212ENST00000621990 APBB1O00213 710 aa11.61□□□□□ -0.55
PDPN-212ENST00000621990 L1TD1Q5T7N2 865 aaKnown RBP11.61□□□□□ -0.55
PDPN-212ENST00000621990 SSH3Q8TE77 659 aa11.61□□□□□ -0.55
PDPN-212ENST00000621990 EXOC6BQ9Y2D4 811 aa11.61□□□□□ -0.55
PDPN-212ENST00000621990 AOX1Q06278 1338 aa11.61□□□□□ -0.55
PDPN-212ENST00000621990 ERC2O15083 957 aa11.61□□□□□ -0.55
PDPN-212ENST00000621990 TRHP20396 242 aaPredicted RBP11.61□□□□□ -0.55
PDPN-212ENST00000621990 LGR6Q9HBX8 967 aa11.61□□□□□ -0.55
PDPN-212ENST00000621990 HEG1Q9ULI3 1381 aa11.61□□□□□ -0.55
PDPN-212ENST00000621990 AMOTQ4VCS5 1084 aa11.6□□□□□ -0.55
PDPN-212ENST00000621990 RBM33Q96EV2 1170 aaKnown RBP11.6□□□□□ -0.55
PDPN-212ENST00000621990 GBP4Q96PP9 640 aa11.6□□□□□ -0.55
PDPN-212ENST00000621990 SRCIN1Q9C0H9 1055 aa11.6□□□□□ -0.55
PDPN-212ENST00000621990 LRRFIP2Q9Y608 721 aaKnown RBP11.6□□□□□ -0.55
PDPN-212ENST00000621990 PXDNQ92626 1479 aa11.6□□□□□ -0.55
PDPN-212ENST00000621990 ALS2Q96Q42 1657 aa11.6□□□□□ -0.55
PDPN-212ENST00000621990 GCP02774 474 aa11.6□□□□□ -0.55
PDPN-212ENST00000621990 MX1P20591 662 aa11.6□□□□□ -0.55
PDPN-212ENST00000621990 PTMSP20962 102 aa11.6□□□□□ -0.55
PDPN-212ENST00000621990 POLA2Q14181 598 aa11.6□□□□□ -0.55
PDPN-212ENST00000621990 NECTIN2Q92692 538 aa11.6□□□□□ -0.55
PDPN-212ENST00000621990 IL17RAQ96F46 866 aa11.6□□□□□ -0.55
PDPN-212ENST00000621990 UBTFL1P0CB47 393 aaPredicted RBP11.59□□□□□ -0.55
PDPN-212ENST00000621990 PHAXQ9H814 394 aaKnown RBP11.59□□□□□ -0.55
PDPN-212ENST00000621990 PLEKHO1Q53GL0 409 aaPredicted RBP11.59□□□□□ -0.55
PDPN-212ENST00000621990 CRYBG1Q9Y4K1 1723 aa11.59□□□□□ -0.55
PDPN-212ENST00000621990 HSP90AA1P07900 732 aaKnown RBP11.58□□□□□ -0.56
PDPN-212ENST00000621990 BEND3Q5T5X7 828 aa11.58□□□□□ -0.56
PDPN-212ENST00000621990 LRRC59Q96AG4 307 aaKnown RBP11.58□□□□□ -0.56
PDPN-212ENST00000621990 ORAI2Q96SN7 254 aa11.58□□□□□ -0.56
PDPN-212ENST00000621990 RAB11FIP3O75154 756 aa11.58□□□□□ -0.56
PDPN-212ENST00000621990 ZNF530Q6P9A1 599 aaPredicted RBP11.58□□□□□ -0.56
PDPN-212ENST00000621990 CHPF2Q9P2E5 772 aa11.58□□□□□ -0.56
PDPN-212ENST00000621990 ISY1Q9ULR0 285 aaKnown RBP11.58□□□□□ -0.56
PDPN-212ENST00000621990 ADCY9O60503 1353 aa11.58□□□□□ -0.56
PDPN-212ENST00000621990 ABCC6O95255 1503 aa11.58□□□□□ -0.56
PDPN-212ENST00000621990 C1orf167Q5SNV9 1468 aa11.57□□□□□ -0.56
PDPN-212ENST00000621990 ST18O60284 1047 aa11.57□□□□□ -0.56
PDPN-212ENST00000621990 CYP2E1P05181 493 aaPredicted RBP11.57□□□□□ -0.56
PDPN-212ENST00000621990 ESYT1Q9BSJ8 1104 aa11.57□□□□□ -0.56
PDPN-212ENST00000621990 RGPD5Q99666 1765 aa11.57□□□□□ -0.56
PDPN-212ENST00000621990 BTBD11A6QL63 1104 aa11.57□□□□□ -0.56
PDPN-212ENST00000621990 RNMTO43148 476 aaKnown RBP11.57□□□□□ -0.56
PDPN-212ENST00000621990 EPB41L2O43491 1005 aaKnown RBP11.57□□□□□ -0.56
PDPN-212ENST00000621990 SKOR2Q2VWA4 1001 aaPredicted RBP11.57□□□□□ -0.56
PDPN-212ENST00000621990 GOLGA6L3A6NEY3 463 aa11.56□□□□□ -0.56
PDPN-212ENST00000621990 KCNQ3O43525 872 aa11.56□□□□□ -0.56
PDPN-212ENST00000621990 TEFQ10587 303 aa11.56□□□□□ -0.56
PDPN-212ENST00000621990 DNAAF4Q8WXU2 420 aa11.56□□□□□ -0.56
PDPN-212ENST00000621990 CWC22Q9HCG8 908 aaKnown RBP11.56□□□□□ -0.56
PDPN-212ENST00000621990 CHMLP26374 656 aa11.56□□□□□ -0.56
PDPN-212ENST00000621990 ANKRD24Q8TF21 1146 aa11.56□□□□□ -0.56
PDPN-212ENST00000621990 AK9Q5TCS8 1911 aa11.56□□□□□ -0.56
PDPN-212ENST00000621990 PLEKHG2Q9H7P9 1386 aa11.55□□□□□ -0.56
PDPN-212ENST00000621990 ANAPC15P60006 121 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms