RNA–Protein interactions for RNA: ENST00000621840.4

TDRD3-209, Transcript of tudor domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene TDRD3, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3-209ENST00000621840 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.43□□□□□ -0.9
TDRD3-209ENST00000621840 MBIPQ9NS73 344 aa9.43□□□□□ -0.9
TDRD3-209ENST00000621840 CDK11BP21127 795 aaKnown RBP9.43□□□□□ -0.9
TDRD3-209ENST00000621840 C16orf71Q8IYS4 520 aaPredicted RBP9.43□□□□□ -0.9
TDRD3-209ENST00000621840 TSPYL1Q9H0U9 437 aa9.43□□□□□ -0.9
TDRD3-209ENST00000621840 GGNBP2Q9H3C7 697 aa9.43□□□□□ -0.9
TDRD3-209ENST00000621840 KIDINS220Q9ULH0 1771 aa9.42□□□□□ -0.9
TDRD3-209ENST00000621840 KIAA0232Q92628 1395 aa9.42□□□□□ -0.9
TDRD3-209ENST00000621840 AOX1Q06278 1338 aa9.42□□□□□ -0.9
TDRD3-209ENST00000621840 FYB1O15117 783 aa9.42□□□□□ -0.9
TDRD3-209ENST00000621840 ZSCAN22P10073 491 aaPredicted RBP9.42□□□□□ -0.9
TDRD3-209ENST00000621840 KRT222Q8N1A0 295 aa9.42□□□□□ -0.9
TDRD3-209ENST00000621840 TSPYL6Q8N831 410 aa9.42□□□□□ -0.9
TDRD3-209ENST00000621840 OTUD7AQ8TE49 926 aaPredicted RBP9.42□□□□□ -0.9
TDRD3-209ENST00000621840 SRCIN1Q9C0H9 1055 aa9.42□□□□□ -0.9
TDRD3-209ENST00000621840 VGFO15240 615 aaPredicted RBP9.42□□□□□ -0.9
TDRD3-209ENST00000621840 SLFN14P0C7P3 912 aa9.42□□□□□ -0.9
TDRD3-209ENST00000621840 CCDC192P0DO97 292 aa9.42□□□□□ -0.9
TDRD3-209ENST00000621840 PDE1AP54750 535 aa9.42□□□□□ -0.9
TDRD3-209ENST00000621840 CALCOCO1Q9P1Z2 691 aa9.42□□□□□ -0.9
TDRD3-209ENST00000621840 MSH6P52701 1360 aa9.42□□□□□ -0.9
TDRD3-209ENST00000621840 TCHHQ07283 1943 aa9.41□□□□□ -0.9
TDRD3-209ENST00000621840 ATP7BP35670 1465 aa9.41□□□□□ -0.9
TDRD3-209ENST00000621840 ITSN1Q15811 1721 aa9.41□□□□□ -0.9
TDRD3-209ENST00000621840 NPATQ14207 1427 aa9.41□□□□□ -0.9
TDRD3-209ENST00000621840 PDIA4P13667 645 aaKnown RBP9.41□□□□□ -0.9
TDRD3-209ENST00000621840 SLFNL1Q499Z3 407 aa9.41□□□□□ -0.9
TDRD3-209ENST00000621840 RNF20Q5VTR2 975 aa9.41□□□□□ -0.9
TDRD3-209ENST00000621840 HDGFL2Q7Z4V5 671 aaPredicted RBP9.41□□□□□ -0.9
TDRD3-209ENST00000621840 AFAP1Q8N556 730 aa9.41□□□□□ -0.9
TDRD3-209ENST00000621840 ZNF397Q8NF99 534 aaPredicted RBP9.41□□□□□ -0.9
TDRD3-209ENST00000621840 NAP1L2Q9ULW6 460 aaPredicted RBP9.41□□□□□ -0.9
TDRD3-209ENST00000621840 FAM177BA6PVY3 158 aa9.41□□□□□ -0.9
TDRD3-209ENST00000621840 SMARCA5O60264 1052 aaPredicted RBP9.41□□□□□ -0.9
TDRD3-209ENST00000621840 KIF18AQ8NI77 898 aa9.41□□□□□ -0.9
TDRD3-209ENST00000621840 FAM200AQ8TCP9 573 aa9.41□□□□□ -0.9
TDRD3-209ENST00000621840 TIGD1Q96MW7 591 aa9.41□□□□□ -0.9
TDRD3-209ENST00000621840 CABP2Q9NPB3 220 aa9.41□□□□□ -0.9
TDRD3-209ENST00000621840 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.41□□□□□ -0.9
TDRD3-209ENST00000621840 N4BP2Q86UW6 1770 aaPredicted RBP9.41□□□□□ -0.9
TDRD3-209ENST00000621840 PTPRMP28827 1452 aa9.4□□□□□ -0.9
TDRD3-209ENST00000621840 SALL3Q9BXA9 1300 aa9.4□□□□□ -0.9
TDRD3-209ENST00000621840 CCDC112Q8NEF3 446 aa9.4□□□□□ -0.9
TDRD3-209ENST00000621840 CCDC171Q6TFL3 1326 aa9.4□□□□□ -0.9
TDRD3-209ENST00000621840 TERF2Q15554 542 aa9.4□□□□□ -0.91
TDRD3-209ENST00000621840 AEBP1Q8IUX7 1158 aa9.4□□□□□ -0.91
TDRD3-209ENST00000621840 DNAJC2Q99543 621 aaKnown RBP9.4□□□□□ -0.91
TDRD3-209ENST00000621840 GDPD2Q9HCC8 539 aa9.4□□□□□ -0.91
TDRD3-209ENST00000621840 CNPY2Q9Y2B0 182 aa9.4□□□□□ -0.91
TDRD3-209ENST00000621840 NRKQ7Z2Y5 1582 aa9.4□□□□□ -0.91
TDRD3-209ENST00000621840 PREX1Q8TCU6 1659 aa9.39□□□□□ -0.91
TDRD3-209ENST00000621840 ZBTB7CA1YPR0 619 aa9.39□□□□□ -0.91
TDRD3-209ENST00000621840 F13A1P00488 732 aa9.39□□□□□ -0.91
TDRD3-209ENST00000621840 TMEM132EQ6IEE7 984 aa9.39□□□□□ -0.91
TDRD3-209ENST00000621840 FAM53CQ9NYF3 392 aa9.39□□□□□ -0.91
TDRD3-209ENST00000621840 CHD2O14647 1828 aaKnown RBP9.39□□□□□ -0.91
TDRD3-209ENST00000621840 STX6O43752 255 aa9.39□□□□□ -0.91
TDRD3-209ENST00000621840 NEMFO60524 1076 aa9.39□□□□□ -0.91
TDRD3-209ENST00000621840 CHMLP26374 656 aa9.39□□□□□ -0.91
TDRD3-209ENST00000621840 CDC25BP30305 580 aa9.39□□□□□ -0.91
TDRD3-209ENST00000621840 MPNDQ8N594 471 aa9.39□□□□□ -0.91
TDRD3-209ENST00000621840 C8orf58Q8NAV2 365 aa9.39□□□□□ -0.91
TDRD3-209ENST00000621840 MAP2P11137 1827 aaKnown RBP9.38□□□□□ -0.91
TDRD3-209ENST00000621840 ARHGEF10O15013 1369 aa9.38□□□□□ -0.91
TDRD3-209ENST00000621840 CHGAP10645 457 aaKnown RBP9.38□□□□□ -0.91
TDRD3-209ENST00000621840 SRPK2P78362 688 aaKnown RBP9.38□□□□□ -0.91
TDRD3-209ENST00000621840 ANO2Q9NQ90 1003 aa9.38□□□□□ -0.91
TDRD3-209ENST00000621840 STAP2Q9UGK3 403 aa9.38□□□□□ -0.91
TDRD3-209ENST00000621840 PALD1Q9ULE6 856 aa9.38□□□□□ -0.91
TDRD3-209ENST00000621840 AP5Z1O43299 807 aa9.38□□□□□ -0.91
TDRD3-209ENST00000621840 CAVIN2O95810 425 aa9.38□□□□□ -0.91
TDRD3-209ENST00000621840 TNNT1P13805 278 aa9.38□□□□□ -0.91
TDRD3-209ENST00000621840 PTGS1P23219 599 aa9.38□□□□□ -0.91
TDRD3-209ENST00000621840 HSPA4P34932 840 aa9.38□□□□□ -0.91
TDRD3-209ENST00000621840 YTHDC2Q9H6S0 1430 aaKnown RBP9.38□□□□□ -0.91
TDRD3-209ENST00000621840 AATKQ6ZMQ8 1374 aa9.37□□□□□ -0.91
TDRD3-209ENST00000621840 MAP3K11Q16584 847 aa9.37□□□□□ -0.91
TDRD3-209ENST00000621840 ADGRL3Q9HAR2 1447 aa9.37□□□□□ -0.91
TDRD3-209ENST00000621840 ELP1O95163 1332 aa9.37□□□□□ -0.91
TDRD3-209ENST00000621840 ERCC6L2Q5T890 1561 aa9.37□□□□□ -0.91
TDRD3-209ENST00000621840 KIF2AO00139 706 aaPredicted RBP9.37□□□□□ -0.91
TDRD3-209ENST00000621840 CCT4P50991 539 aaKnown RBP9.37□□□□□ -0.91
TDRD3-209ENST00000621840 IRX5P78411 483 aaPredicted RBP9.37□□□□□ -0.91
TDRD3-209ENST00000621840 PLCB2Q00722 1185 aa9.37□□□□□ -0.91
TDRD3-209ENST00000621840 GIMAP6Q6P9H5 292 aa9.37□□□□□ -0.91
TDRD3-209ENST00000621840 SPC24Q8NBT2 197 aa9.37□□□□□ -0.91
TDRD3-209ENST00000621840 ERO1AQ96HE7 468 aa9.37□□□□□ -0.91
TDRD3-209ENST00000621840 SMC3Q9UQE7 1217 aa9.37□□□□□ -0.91
TDRD3-209ENST00000621840 CRYBG1Q9Y4K1 1723 aa9.36□□□□□ -0.91
TDRD3-209ENST00000621840 TULP2O00295 520 aa9.36□□□□□ -0.91
TDRD3-209ENST00000621840 ZNF75DP51815 510 aa9.36□□□□□ -0.91
TDRD3-209ENST00000621840 PLA2G4DQ86XP0 818 aa9.36□□□□□ -0.91
TDRD3-209ENST00000621840 TDRD7Q8NHU6 1098 aaKnown RBP9.36□□□□□ -0.91
TDRD3-209ENST00000621840 PHACTR3Q96KR7 559 aa9.36□□□□□ -0.91
TDRD3-209ENST00000621840 THUMPD2Q9BTF0 503 aaKnown RBP9.36□□□□□ -0.91
TDRD3-209ENST00000621840 POLKQ9UBT6 870 aa9.36□□□□□ -0.91
TDRD3-209ENST00000621840 LIMCH1Q9UPQ0 1083 aa9.36□□□□□ -0.91
TDRD3-209ENST00000621840 DLC1Q96QB1 1528 aa9.36□□□□□ -0.91
TDRD3-209ENST00000621840 RAD50Q92878 1312 aa9.36□□□□□ -0.91
TDRD3-209ENST00000621840 FIBPO43427 364 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms