RNA–Protein interactions for RNA: ENST00000621198.4

SYN2-206, Transcript of synapsin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYN2, Length 2,674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-206ENST00000621198 TTC21AQ8NDW8 1320 aa23.29■■□□□ 1.32
SYN2-206ENST00000621198 CLCN1P35523 988 aa23.29■■□□□ 1.32
SYN2-206ENST00000621198 CLEC17AQ6ZS10 378 aa23.29■■□□□ 1.32
SYN2-206ENST00000621198 NAP1L5Q96NT1 182 aaPredicted RBP23.29■■□□□ 1.32
SYN2-206ENST00000621198 CAVIN1Q6NZI2 390 aaKnown RBP23.29■■□□□ 1.32
SYN2-206ENST00000621198 RILPL2Q969X0 211 aa23.29■■□□□ 1.32
SYN2-206ENST00000621198 IGSF1Q8N6C5 1336 aa23.29■■□□□ 1.32
SYN2-206ENST00000621198 TRIM6-TRIM34B2RNG4 842 aa23.28■■□□□ 1.32
SYN2-206ENST00000621198 NOL8Q76FK4 1167 aaKnown RBP23.28■■□□□ 1.32
SYN2-206ENST00000621198 LRRCC1Q9C099 1032 aa23.28■■□□□ 1.32
SYN2-206ENST00000621198 NEK4P51957 841 aa23.27■■□□□ 1.32
SYN2-206ENST00000621198 KDRP35968 1356 aa23.27■■□□□ 1.32
SYN2-206ENST00000621198 ESPNB1AK53 854 aa23.27■■□□□ 1.32
SYN2-206ENST00000621198 CYP2E1P05181 493 aaPredicted RBP23.27■■□□□ 1.32
SYN2-206ENST00000621198 FMN2Q9NZ56 1722 aa23.27■■□□□ 1.31
SYN2-206ENST00000621198 GNAT3A8MTJ3 354 aa23.26■■□□□ 1.31
SYN2-206ENST00000621198 CCDC30Q5VVM6 783 aa23.26■■□□□ 1.31
SYN2-206ENST00000621198 LRRFIP2Q9Y608 721 aaKnown RBP23.26■■□□□ 1.31
SYN2-206ENST00000621198 NASPP49321 788 aaPredicted RBP23.26■■□□□ 1.31
SYN2-206ENST00000621198 OSBPL3Q9H4L5 887 aa23.26■■□□□ 1.31
SYN2-206ENST00000621198 MX1P20591 662 aa23.26■■□□□ 1.31
SYN2-206ENST00000621198 USHBP1Q8N6Y0 703 aa23.26■■□□□ 1.31
SYN2-206ENST00000621198 PRPF40AO75400 957 aaKnown RBP23.25■■□□□ 1.31
SYN2-206ENST00000621198 C14orf37Q86TY3 774 aa23.25■■□□□ 1.31
SYN2-206ENST00000621198 LMBRD1Q9NUN5 540 aa23.25■■□□□ 1.31
SYN2-206ENST00000621198 CWC22Q9HCG8 908 aaKnown RBP23.24■■□□□ 1.31
SYN2-206ENST00000621198 ZDHHC9Q9Y397 364 aa23.24■■□□□ 1.31
SYN2-206ENST00000621198 RGPD8O14715 1765 aaPredicted RBP23.24■■□□□ 1.31
SYN2-206ENST00000621198 GNAI3P08754 354 aa23.24■■□□□ 1.31
SYN2-206ENST00000621198 ANO2Q9NQ90 1003 aa23.24■■□□□ 1.31
SYN2-206ENST00000621198 IL17REQ8NFR9 667 aa23.23■■□□□ 1.31
SYN2-206ENST00000621198 ESYT1Q9BSJ8 1104 aa23.23■■□□□ 1.31
SYN2-206ENST00000621198 PALD1Q9ULE6 856 aa23.23■■□□□ 1.31
SYN2-206ENST00000621198 IL1RAPL2Q9NP60 686 aa23.23■■□□□ 1.31
SYN2-206ENST00000621198 HOXC9P31274 260 aa23.22■■□□□ 1.31
SYN2-206ENST00000621198 RBM27Q9P2N5 1060 aaKnown RBP23.22■■□□□ 1.31
SYN2-206ENST00000621198 ATP8B2P98198 1209 aa23.22■■□□□ 1.31
SYN2-206ENST00000621198 ZSCAN23Q3MJ62 389 aa23.21■■□□□ 1.31
SYN2-206ENST00000621198 UNC5CLQ8IV45 518 aa23.21■■□□□ 1.31
SYN2-206ENST00000621198 SALL3Q9BXA9 1300 aa23.21■■□□□ 1.31
SYN2-206ENST00000621198 TMX3Q96JJ7 454 aa23.21■■□□□ 1.31
SYN2-206ENST00000621198 PHAXQ9H814 394 aaKnown RBP23.2■■□□□ 1.3
SYN2-206ENST00000621198 ABTB2Q8N961 1025 aa23.2■■□□□ 1.3
SYN2-206ENST00000621198 MAP4K4O95819 1239 aaPredicted RBP23.19■■□□□ 1.3
SYN2-206ENST00000621198 PIK3C2AO00443 1686 aa23.19■■□□□ 1.3
SYN2-206ENST00000621198 DIP2AQ14689 1571 aa23.19■■□□□ 1.3
SYN2-206ENST00000621198 CHMLP26374 656 aa23.19■■□□□ 1.3
SYN2-206ENST00000621198 KIF13AQ9H1H9 1805 aa23.19■■□□□ 1.3
SYN2-206ENST00000621198 IBTKQ9P2D0 1353 aaPredicted RBP23.19■■□□□ 1.3
SYN2-206ENST00000621198 NUTM1Q86Y26 1132 aa23.18■■□□□ 1.3
SYN2-206ENST00000621198 GPT2Q8TD30 523 aa23.18■■□□□ 1.3
SYN2-206ENST00000621198 USP44Q9H0E7 712 aa23.18■■□□□ 1.3
SYN2-206ENST00000621198 UBTFL1P0CB47 393 aaPredicted RBP23.18■■□□□ 1.3
SYN2-206ENST00000621198 EIF2S2P20042 333 aaKnown RBP23.18■■□□□ 1.3
SYN2-206ENST00000621198 HDGFL1Q5TGJ6 251 aa23.18■■□□□ 1.3
SYN2-206ENST00000621198 ZBTB7CA1YPR0 619 aa23.17■■□□□ 1.3
SYN2-206ENST00000621198 TAF7Q15545 349 aaPredicted RBP23.17■■□□□ 1.3
SYN2-206ENST00000621198 ANP32BQ92688 251 aaKnown RBP23.17■■□□□ 1.3
SYN2-206ENST00000621198 UPF3BQ9BZI7 483 aaKnown RBP23.17■■□□□ 1.3
SYN2-206ENST00000621198 MAP3K5Q99683 1374 aa23.17■■□□□ 1.3
SYN2-206ENST00000621198 HTATSF1O43719 755 aaKnown RBP23.17■■□□□ 1.3
SYN2-206ENST00000621198 MCCP23508 829 aa23.16■■□□□ 1.3
SYN2-206ENST00000621198 CCDC173Q0VFZ6 552 aa23.16■■□□□ 1.3
SYN2-206ENST00000621198 FOXD4L6Q3SYB3 417 aaPredicted RBP23.16■■□□□ 1.3
SYN2-206ENST00000621198 FOXD4L3Q6VB84 417 aaPredicted RBP23.16■■□□□ 1.3
SYN2-206ENST00000621198 TBX22Q9Y458 520 aa23.16■■□□□ 1.3
SYN2-206ENST00000621198 PLEKHG5O94827 1062 aa23.16■■□□□ 1.3
SYN2-206ENST00000621198 IL25Q9H293 177 aa23.15■■□□□ 1.3
SYN2-206ENST00000621198 NSFL1CQ9UNZ2 370 aaKnown RBP23.15■■□□□ 1.3
SYN2-206ENST00000621198 FAM208AQ9UK61 1670 aaKnown RBP23.15■■□□□ 1.3
SYN2-206ENST00000621198 ZNF445P59923 1031 aa23.15■■□□□ 1.3
SYN2-206ENST00000621198 KCNA6P17658 529 aa23.14■■□□□ 1.29
SYN2-206ENST00000621198 PRIM1P49642 420 aaKnown RBP23.14■■□□□ 1.29
SYN2-206ENST00000621198 RBSNQ9H1K0 784 aa23.14■■□□□ 1.29
SYN2-206ENST00000621198 XRN1Q8IZH2 1706 aaKnown RBP23.14■■□□□ 1.29
SYN2-206ENST00000621198 SURF6O75683 361 aaKnown RBP23.13■■□□□ 1.29
SYN2-206ENST00000621198 PPP1R42Q7Z4L9 355 aa23.13■■□□□ 1.29
SYN2-206ENST00000621198 RBM33Q96EV2 1170 aaKnown RBP23.13■■□□□ 1.29
SYN2-206ENST00000621198 PPP1R9BQ96SB3 815 aa23.11■■□□□ 1.29
SYN2-206ENST00000621198 ANXA1P04083 346 aa23.11■■□□□ 1.29
SYN2-206ENST00000621198 STAP2Q9UGK3 403 aa23.11■■□□□ 1.29
SYN2-206ENST00000621198 LRRC37A3O60309 1634 aa23.1■■□□□ 1.29
SYN2-206ENST00000621198 TMEM63CQ9P1W3 806 aa23.1■■□□□ 1.29
SYN2-206ENST00000621198 SOS1Q07889 1333 aaPredicted RBP23.1■■□□□ 1.29
SYN2-206ENST00000621198 SYCE3A1L190 88 aa23.1■■□□□ 1.29
SYN2-206ENST00000621198 SRCIN1Q9C0H9 1055 aa23.1■■□□□ 1.29
SYN2-206ENST00000621198 NWD1Q149M9 1564 aa23.1■■□□□ 1.29
SYN2-206ENST00000621198 LGR6Q9HBX8 967 aa23.09■■□□□ 1.29
SYN2-206ENST00000621198 SRGAP3O43295 1099 aa23.09■■□□□ 1.29
SYN2-206ENST00000621198 NBPF7P0C2Y1 421 aaPredicted RBP23.09■■□□□ 1.29
SYN2-206ENST00000621198 KCNQ3O43525 872 aa23.08■■□□□ 1.29
SYN2-206ENST00000621198 MCM2P49736 904 aa23.08■■□□□ 1.29
SYN2-206ENST00000621198 SSH3Q8TE77 659 aa23.08■■□□□ 1.29
SYN2-206ENST00000621198 CHPF2Q9P2E5 772 aa23.08■■□□□ 1.29
SYN2-206ENST00000621198 PRKCSHP14314 528 aaPredicted RBP23.07■■□□□ 1.28
SYN2-206ENST00000621198 TUBGCP6Q96RT7 1819 aa23.07■■□□□ 1.28
SYN2-206ENST00000621198 THEMISQ8N1K5 641 aaPredicted RBP23.06■■□□□ 1.28
SYN2-206ENST00000621198 SETD1BQ9UPS6 1966 aaKnown RBP23.06■■□□□ 1.28
SYN2-206ENST00000621198 BRD1O95696 1058 aa23.06■■□□□ 1.28
SYN2-206ENST00000621198 ANAPC15P60006 121 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms