RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 IL17REQ8NFR9 667 aa24.23■■□□□ 1.47
LITAF-220ENST00000620789 ADAMTS8Q9UP79 889 aa24.23■■□□□ 1.47
LITAF-220ENST00000620789 KCNQ4P56696 695 aa24.22■■□□□ 1.47
LITAF-220ENST00000620789 CEMIPQ8WUJ3 1361 aa24.21■■□□□ 1.47
LITAF-220ENST00000620789 PSDA5PKW4 1024 aaPredicted RBP24.21■■□□□ 1.47
LITAF-220ENST00000620789 HTATSF1O43719 755 aaKnown RBP24.2■■□□□ 1.46
LITAF-220ENST00000620789 NFE2L2Q16236 605 aa24.2■■□□□ 1.46
LITAF-220ENST00000620789 RTF1Q92541 710 aaKnown RBP24.2■■□□□ 1.46
LITAF-220ENST00000620789 STK32BQ9NY57 414 aa24.2■■□□□ 1.46
LITAF-220ENST00000620789 DLG5Q8TDM6 1919 aa24.2■■□□□ 1.46
LITAF-220ENST00000620789 C5P01031 1676 aa24.19■■□□□ 1.46
LITAF-220ENST00000620789 LOC102724428A0A0B4J2F2 783 aa24.19■■□□□ 1.46
LITAF-220ENST00000620789 SIK1P57059 783 aa24.19■■□□□ 1.46
LITAF-220ENST00000620789 TEFQ10587 303 aa24.19■■□□□ 1.46
LITAF-220ENST00000620789 MRS2Q9HD23 443 aa24.19■■□□□ 1.46
LITAF-220ENST00000620789 SIPA1L3O60292 1781 aaPredicted RBP24.19■■□□□ 1.46
LITAF-220ENST00000620789 SLC15A2Q16348 729 aa24.18■■□□□ 1.46
LITAF-220ENST00000620789 CCDC146Q8IYE0 955 aa24.18■■□□□ 1.46
LITAF-220ENST00000620789 RUNDC1Q96C34 613 aa24.18■■□□□ 1.46
LITAF-220ENST00000620789 TAF1LQ8IZX4 1826 aa24.17■■□□□ 1.46
LITAF-220ENST00000620789 MCM10Q7L590 875 aa24.17■■□□□ 1.46
LITAF-220ENST00000620789 ZNF831Q5JPB2 1677 aa24.16■■□□□ 1.46
LITAF-220ENST00000620789 HMGB2P26583 209 aaKnown RBP24.16■■□□□ 1.46
LITAF-220ENST00000620789 ZNF827Q17R98 1081 aa24.16■■□□□ 1.46
LITAF-220ENST00000620789 AKT1S1Q96B36 256 aa24.15■■□□□ 1.46
LITAF-220ENST00000620789 RBM42Q9BTD8 480 aaKnown RBP24.15■■□□□ 1.46
LITAF-220ENST00000620789 ATP6V1AP38606 617 aa24.14■■□□□ 1.45
LITAF-220ENST00000620789 DCTN1Q14203 1278 aa24.14■■□□□ 1.45
LITAF-220ENST00000620789 PNISRQ8TF01 805 aaKnown RBP24.14■■□□□ 1.45
LITAF-220ENST00000620789 PTCD1O75127 700 aaKnown RBP24.13■■□□□ 1.45
LITAF-220ENST00000620789 TMPOP42166 694 aaKnown RBP24.13■■□□□ 1.45
LITAF-220ENST00000620789 SLC39A6Q13433 755 aa24.13■■□□□ 1.45
LITAF-220ENST00000620789 SLC4A9Q96Q91 983 aa24.13■■□□□ 1.45
LITAF-220ENST00000620789 RIPK4P57078 832 aa24.12■■□□□ 1.45
LITAF-220ENST00000620789 ITPK1Q13572 414 aa24.12■■□□□ 1.45
LITAF-220ENST00000620789 C4BP0C0L5 1744 aa24.12■■□□□ 1.45
LITAF-220ENST00000620789 KCPQ6ZWJ8 1503 aa24.11■■□□□ 1.45
LITAF-220ENST00000620789 UBR2Q8IWV8 1755 aa24.11■■□□□ 1.45
LITAF-220ENST00000620789 CICQ96RK0 1608 aaPredicted RBP24.1■■□□□ 1.45
LITAF-220ENST00000620789 QSER1Q2KHR3 1735 aa24.1■■□□□ 1.45
LITAF-220ENST00000620789 LINC00116Q8NCU8 138 aa24.1■■□□□ 1.45
LITAF-220ENST00000620789 CASZ1Q86V15 1759 aa24.09■■□□□ 1.45
LITAF-220ENST00000620789 TTC5Q8N0Z6 440 aa24.09■■□□□ 1.45
LITAF-220ENST00000620789 RRP7AQ9Y3A4 280 aaKnown RBP24.09■■□□□ 1.45
LITAF-220ENST00000620789 TUBGCP6Q96RT7 1819 aa24.09■■□□□ 1.45
LITAF-220ENST00000620789 COL5A3P25940 1745 aaPredicted RBP24.09■■□□□ 1.45
LITAF-220ENST00000620789 TJP1Q07157 1748 aa24.08■■□□□ 1.45
LITAF-220ENST00000620789 BTBD11A6QL63 1104 aa24.08■■□□□ 1.45
LITAF-220ENST00000620789 LMOD3Q0VAK6 560 aa24.08■■□□□ 1.45
LITAF-220ENST00000620789 ZNF790Q6PG37 636 aa24.08■■□□□ 1.45
LITAF-220ENST00000620789 TFCP2L1Q9NZI6 479 aa24.08■■□□□ 1.45
LITAF-220ENST00000620789 NEUROD2Q15784 382 aa24.07■■□□□ 1.44
LITAF-220ENST00000620789 THUMPD2Q9BTF0 503 aaKnown RBP24.07■■□□□ 1.44
LITAF-220ENST00000620789 TAF7Q15545 349 aaPredicted RBP24.06■■□□□ 1.44
LITAF-220ENST00000620789 AK7Q96M32 723 aa24.06■■□□□ 1.44
LITAF-220ENST00000620789 PDGFDQ9GZP0 370 aaPredicted RBP24.05■■□□□ 1.44
LITAF-220ENST00000620789 PNPLA7Q6ZV29 1317 aa24.05■■□□□ 1.44
LITAF-220ENST00000620789 APAF1O14727 1248 aa24.04■■□□□ 1.44
LITAF-220ENST00000620789 DIEXFQ68CQ4 756 aaKnown RBP24.04■■□□□ 1.44
LITAF-220ENST00000620789 VSIG10Q8N0Z9 540 aa24.04■■□□□ 1.44
LITAF-220ENST00000620789 ZNF496Q96IT1 587 aaPredicted RBP24.03■■□□□ 1.44
LITAF-220ENST00000620789 TRIM35Q9UPQ4 493 aa24.03■■□□□ 1.44
LITAF-220ENST00000620789 SRCAPQ6ZRS2 3230 aa24.03■■□□□ 1.44
LITAF-220ENST00000620789 UBR3Q6ZT12 1888 aa24.02■■□□□ 1.44
LITAF-220ENST00000620789 KCNQ3O43525 872 aa24.02■■□□□ 1.44
LITAF-220ENST00000620789 CNTNAP4Q9C0A0 1308 aa24.02■■□□□ 1.44
LITAF-220ENST00000620789 RC3H1Q5TC82 1133 aaKnown RBP24.01■■□□□ 1.43
LITAF-220ENST00000620789 DNAJC10Q8IXB1 793 aa24.01■■□□□ 1.43
LITAF-220ENST00000620789 FMNL2Q96PY5 1086 aa24.01■■□□□ 1.43
LITAF-220ENST00000620789 HEG1Q9ULI3 1381 aa24.01■■□□□ 1.43
LITAF-220ENST00000620789 KDM3BQ7LBC6 1761 aa24.01■■□□□ 1.43
LITAF-220ENST00000620789 LRP5O75197 1615 aa24■■□□□ 1.43
LITAF-220ENST00000620789 GNPATO15228 680 aa24■■□□□ 1.43
LITAF-220ENST00000620789 AMIGO3Q86WK7 504 aa23.99■■□□□ 1.43
LITAF-220ENST00000620789 FAM9BQ8IZU0 186 aa23.99■■□□□ 1.43
LITAF-220ENST00000620789 FLAD1Q8NFF5 587 aa23.99■■□□□ 1.43
LITAF-220ENST00000620789 MIS18AQ9NYP9 233 aa23.99■■□□□ 1.43
LITAF-220ENST00000620789 SSFA2P28290 1259 aa23.98■■□□□ 1.43
LITAF-220ENST00000620789 CRKLP46109 303 aaKnown RBP23.98■■□□□ 1.43
LITAF-220ENST00000620789 COL23A1Q86Y22 540 aaPredicted RBP23.98■■□□□ 1.43
LITAF-220ENST00000620789 MYH14Q7Z406 1995 aaKnown RBP23.98■■□□□ 1.43
LITAF-220ENST00000620789 CCER2I3L3R5 266 aa23.97■■□□□ 1.43
LITAF-220ENST00000620789 ZBTB7AO95365 584 aa23.97■■□□□ 1.43
LITAF-220ENST00000620789 CYP19A1P11511 503 aaPredicted RBP23.97■■□□□ 1.43
LITAF-220ENST00000620789 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.96■■□□□ 1.43
LITAF-220ENST00000620789 PHF14O94880 888 aa23.96■■□□□ 1.43
LITAF-220ENST00000620789 SLC16A10Q8TF71 515 aa23.96■■□□□ 1.43
LITAF-220ENST00000620789 TEX13AQ9BXU3 409 aaPredicted RBP23.96■■□□□ 1.43
LITAF-220ENST00000620789 MTFR1LQ9H019 292 aa23.96■■□□□ 1.43
LITAF-220ENST00000620789 SPON1Q9HCB6 807 aa23.96■■□□□ 1.43
LITAF-220ENST00000620789 RTCBQ9Y3I0 505 aaKnown RBP23.96■■□□□ 1.43
LITAF-220ENST00000620789 MSH5O43196 834 aa23.95■■□□□ 1.42
LITAF-220ENST00000620789 RPS6KA4O75676 772 aa23.95■■□□□ 1.42
LITAF-220ENST00000620789 SMIM5Q71RC9 77 aa23.95■■□□□ 1.42
LITAF-220ENST00000620789 CCDC87Q9NVE4 849 aa23.95■■□□□ 1.42
LITAF-220ENST00000620789 BABAM1Q9NWV8 329 aa23.95■■□□□ 1.42
LITAF-220ENST00000620789 STARD3NLO95772 234 aa23.94■■□□□ 1.42
LITAF-220ENST00000620789 INTS5Q6P9B9 1019 aaKnown RBP23.94■■□□□ 1.42
LITAF-220ENST00000620789 TSPYL4Q9UJ04 414 aa23.94■■□□□ 1.42
LITAF-220ENST00000620789 SNRPA1P09661 255 aaKnown RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms