RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, human

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBFOX1-223	ENST00000620507	PLEKHG1	Q9ULL1	1385 aa		11.19	□□□□□ -0.62
RBFOX1-223	ENST00000620507	GOLGA6L4	A6NEF3	574 aa		11.18	□□□□□ -0.62
RBFOX1-223	ENST00000620507	MAP4K4	O95819	1239 aa	Predicted RBP	11.18	□□□□□ -0.62
RBFOX1-223	ENST00000620507	AMOT	Q4VCS5	1084 aa		11.18	□□□□□ -0.62
RBFOX1-223	ENST00000620507	TSHZ3	Q63HK5	1081 aa		11.18	□□□□□ -0.62
RBFOX1-223	ENST00000620507	NUTM1	Q86Y26	1132 aa		11.18	□□□□□ -0.62
RBFOX1-223	ENST00000620507	PREX1	Q8TCU6	1659 aa		11.18	□□□□□ -0.62
RBFOX1-223	ENST00000620507	KIAA0232	Q92628	1395 aa		11.18	□□□□□ -0.62
RBFOX1-223	ENST00000620507	ZKSCAN1	P17029	563 aa	Predicted RBP	11.18	□□□□□ -0.62
RBFOX1-223	ENST00000620507	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.18	□□□□□ -0.62
RBFOX1-223	ENST00000620507	PDE1A	P54750	535 aa		11.18	□□□□□ -0.62
RBFOX1-223	ENST00000620507	USP6	P35125	1406 aa		11.17	□□□□□ -0.62
RBFOX1-223	ENST00000620507	DNAAF4	Q8WXU2	420 aa		11.17	□□□□□ -0.62
RBFOX1-223	ENST00000620507	LRRC7	Q96NW7	1537 aa		11.17	□□□□□ -0.62
RBFOX1-223	ENST00000620507	ARHGEF28	Q8N1W1	1705 aa	Known RBP	11.17	□□□□□ -0.62
RBFOX1-223	ENST00000620507	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.17	□□□□□ -0.62
RBFOX1-223	ENST00000620507	KIF1BP	Q96EK5	621 aa		11.17	□□□□□ -0.62
RBFOX1-223	ENST00000620507	CPSF1	Q10570	1443 aa	Known RBP	11.17	□□□□□ -0.62
RBFOX1-223	ENST00000620507	PI4KAP2	A4QPH2	592 aa		11.17	□□□□□ -0.62
RBFOX1-223	ENST00000620507	PI4KAP1	Q8N8J0	262 aa		11.17	□□□□□ -0.62
RBFOX1-223	ENST00000620507	TMEM131L	A2VDJ0	1609 aa		11.16	□□□□□ -0.62
RBFOX1-223	ENST00000620507	TAT	P17735	454 aa	Predicted RBP	11.16	□□□□□ -0.62
RBFOX1-223	ENST00000620507	RAB11FIP3	O75154	756 aa		11.16	□□□□□ -0.62
RBFOX1-223	ENST00000620507	DBF4	Q9UBU7	674 aa	Predicted RBP	11.16	□□□□□ -0.62
RBFOX1-223	ENST00000620507	ARHGEF10	O15013	1369 aa		11.16	□□□□□ -0.62
RBFOX1-223	ENST00000620507	MAP3K5	Q99683	1374 aa		11.16	□□□□□ -0.62
RBFOX1-223	ENST00000620507	CLTC	Q00610	1675 aa	Known RBP	11.16	□□□□□ -0.62
RBFOX1-223	ENST00000620507	PRPF40A	O75400	957 aa	Known RBP	11.16	□□□□□ -0.62
RBFOX1-223	ENST00000620507	ANXA1	P04083	346 aa		11.16	□□□□□ -0.62
RBFOX1-223	ENST00000620507	SSFA2	P28290	1259 aa		11.16	□□□□□ -0.62
RBFOX1-223	ENST00000620507	CAVIN1	Q6NZI2	390 aa	Known RBP	11.16	□□□□□ -0.62
RBFOX1-223	ENST00000620507	CCDC9	Q9Y3X0	531 aa	Known RBP	11.16	□□□□□ -0.62
RBFOX1-223	ENST00000620507	KIF24	Q5T7B8	1368 aa		11.16	□□□□□ -0.62
RBFOX1-223	ENST00000620507	ATP8B2	P98198	1209 aa		11.15	□□□□□ -0.62
RBFOX1-223	ENST00000620507	PPP1R42	Q7Z4L9	355 aa		11.15	□□□□□ -0.62
RBFOX1-223	ENST00000620507	ERC1	Q8IUD2	1116 aa		11.15	□□□□□ -0.62
RBFOX1-223	ENST00000620507	SIRT2	Q8IXJ6	389 aa		11.15	□□□□□ -0.62
RBFOX1-223	ENST00000620507	ISY1	Q9ULR0	285 aa	Known RBP	11.15	□□□□□ -0.62
RBFOX1-223	ENST00000620507	AGL	P35573	1532 aa		11.15	□□□□□ -0.62
RBFOX1-223	ENST00000620507	DLC1	Q96QB1	1528 aa		11.15	□□□□□ -0.62
RBFOX1-223	ENST00000620507	GRPEL1	Q9HAV7	217 aa		11.15	□□□□□ -0.62
RBFOX1-223	ENST00000620507	MYL6B	P14649	208 aa		11.14	□□□□□ -0.63
RBFOX1-223	ENST00000620507	UPF3B	Q9BZI7	483 aa	Known RBP	11.14	□□□□□ -0.63
RBFOX1-223	ENST00000620507	ATP6V1D	Q9Y5K8	247 aa		11.14	□□□□□ -0.63
RBFOX1-223	ENST00000620507	IFT172	Q9UG01	1749 aa		11.14	□□□□□ -0.63
RBFOX1-223	ENST00000620507	NLRP1	Q9C000	1473 aa		11.14	□□□□□ -0.63
RBFOX1-223	ENST00000620507	IP6K1	Q92551	441 aa		11.14	□□□□□ -0.63
RBFOX1-223	ENST00000620507	LRRC59	Q96AG4	307 aa	Known RBP	11.14	□□□□□ -0.63
RBFOX1-223	ENST00000620507	CHPF2	Q9P2E5	772 aa		11.14	□□□□□ -0.63
RBFOX1-223	ENST00000620507	USP32	Q8NFA0	1604 aa		11.14	□□□□□ -0.63
RBFOX1-223	ENST00000620507	GORAB	Q5T7V8	394 aa		11.14	□□□□□ -0.63
RBFOX1-223	ENST00000620507	SPG7	Q9UQ90	795 aa		11.14	□□□□□ -0.63
RBFOX1-223	ENST00000620507	CD163L1	Q9NR16	1453 aa		11.14	□□□□□ -0.63
RBFOX1-223	ENST00000620507	PHF14	O94880	888 aa		11.13	□□□□□ -0.63
RBFOX1-223	ENST00000620507	CWC27	Q6UX04	472 aa	Known RBP	11.13	□□□□□ -0.63
RBFOX1-223	ENST00000620507	SMC3	Q9UQE7	1217 aa		11.13	□□□□□ -0.63
RBFOX1-223	ENST00000620507	PTCH1	Q13635	1447 aa		11.13	□□□□□ -0.63
RBFOX1-223	ENST00000620507	KRT28	Q7Z3Y7	464 aa		11.13	□□□□□ -0.63
RBFOX1-223	ENST00000620507	ANKRD24	Q8TF21	1146 aa		11.13	□□□□□ -0.63
RBFOX1-223	ENST00000620507	SIL1	Q9H173	461 aa		11.13	□□□□□ -0.63
RBFOX1-223	ENST00000620507	RTL1	A6NKG5	1358 aa		11.13	□□□□□ -0.63
RBFOX1-223	ENST00000620507	NASP	P49321	788 aa	Predicted RBP	11.13	□□□□□ -0.63
RBFOX1-223	ENST00000620507	RNF20	Q5VTR2	975 aa		11.13	□□□□□ -0.63
RBFOX1-223	ENST00000620507	USP26	Q9BXU7	913 aa		11.13	□□□□□ -0.63
RBFOX1-223	ENST00000620507	PHAX	Q9H814	394 aa	Known RBP	11.13	□□□□□ -0.63
RBFOX1-223	ENST00000620507	GSPT1	P15170	499 aa	Known RBP	11.13	□□□□□ -0.63
RBFOX1-223	ENST00000620507	CSPP1	Q1MSJ5	1256 aa		11.13	□□□□□ -0.63
RBFOX1-223	ENST00000620507	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.13	□□□□□ -0.63
RBFOX1-223	ENST00000620507	TAF7L	Q5H9L4	462 aa		11.12	□□□□□ -0.63
RBFOX1-223	ENST00000620507	AKAP4	Q5JQC9	854 aa		11.12	□□□□□ -0.63
RBFOX1-223	ENST00000620507	AACS	Q86V21	672 aa		11.12	□□□□□ -0.63
RBFOX1-223	ENST00000620507	FSD1	Q9BTV5	496 aa		11.12	□□□□□ -0.63
RBFOX1-223	ENST00000620507	SOS1	Q07889	1333 aa	Predicted RBP	11.12	□□□□□ -0.63
RBFOX1-223	ENST00000620507	GLRX3	O76003	335 aa	Known RBP	11.12	□□□□□ -0.63
RBFOX1-223	ENST00000620507	GC	P02774	474 aa		11.12	□□□□□ -0.63
RBFOX1-223	ENST00000620507	HSP90B1	P14625	803 aa	Known RBP	11.12	□□□□□ -0.63
RBFOX1-223	ENST00000620507	IL17RE	Q8NFR9	667 aa		11.12	□□□□□ -0.63
RBFOX1-223	ENST00000620507	IGSF1	Q8N6C5	1336 aa		11.12	□□□□□ -0.63
RBFOX1-223	ENST00000620507	EVA1C	P58658	441 aa		11.12	□□□□□ -0.63
RBFOX1-223	ENST00000620507	FAM43A	Q8N2R8	423 aa		11.12	□□□□□ -0.63
RBFOX1-223	ENST00000620507	RHPN1	Q8TCX5	695 aa		11.12	□□□□□ -0.63
RBFOX1-223	ENST00000620507	BABAM1	Q9NWV8	329 aa		11.12	□□□□□ -0.63
RBFOX1-223	ENST00000620507	MAP3K2	Q9Y2U5	619 aa		11.12	□□□□□ -0.63
RBFOX1-223	ENST00000620507	ANTXR1	Q9H6X2	564 aa		11.11	□□□□□ -0.63
RBFOX1-223	ENST00000620507	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.11	□□□□□ -0.63
RBFOX1-223	ENST00000620507	RICTOR	Q6R327	1708 aa		11.11	□□□□□ -0.63
RBFOX1-223	ENST00000620507	COL3A1	P02461	1466 aa	Predicted RBP	11.11	□□□□□ -0.63
RBFOX1-223	ENST00000620507	BAG4	O95429	457 aa	Known RBP	11.11	□□□□□ -0.63
RBFOX1-223	ENST00000620507	RAB3GAP1	Q15042	981 aa		11.11	□□□□□ -0.63
RBFOX1-223	ENST00000620507	HYPK	Q9NX55	129 aa		11.11	□□□□□ -0.63
RBFOX1-223	ENST00000620507	SIGLEC1	Q9BZZ2	1709 aa		11.11	□□□□□ -0.63
RBFOX1-223	ENST00000620507	MBD3	O95983	291 aa		11.1	□□□□□ -0.63
RBFOX1-223	ENST00000620507	ESYT1	Q9BSJ8	1104 aa		11.1	□□□□□ -0.63
RBFOX1-223	ENST00000620507	CABP4	P57796	275 aa		11.1	□□□□□ -0.63
RBFOX1-223	ENST00000620507	NBPF6	Q5VWK0	638 aa		11.1	□□□□□ -0.63
RBFOX1-223	ENST00000620507	NBPF4	Q96M43	638 aa		11.1	□□□□□ -0.63
RBFOX1-223	ENST00000620507	LGR6	Q9HBX8	967 aa		11.1	□□□□□ -0.63
RBFOX1-223	ENST00000620507	PNMA6E	A0A0J9YXQ4	647 aa		11.1	□□□□□ -0.63
RBFOX1-223	ENST00000620507	VPS37C	A5D8V6	355 aa	Predicted RBP	11.1	□□□□□ -0.63
RBFOX1-223	ENST00000620507	HIP1	O00291	1037 aa		11.1	□□□□□ -0.63

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