RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 STAP2Q9UGK3 403 aa16.06■□□□□ 0.16
SKP2-209ENST00000620197 ST18O60284 1047 aa16.06■□□□□ 0.16
SKP2-209ENST00000620197 TMEM2Q9UHN6 1383 aa16.05■□□□□ 0.16
SKP2-209ENST00000620197 EPB41L2O43491 1005 aaKnown RBP16.05■□□□□ 0.16
SKP2-209ENST00000620197 BRD1O95696 1058 aa16.05■□□□□ 0.16
SKP2-209ENST00000620197 TXNDC2Q86VQ3 553 aa16.05■□□□□ 0.16
SKP2-209ENST00000620197 TRIM44Q96DX7 344 aaPredicted RBP16.05■□□□□ 0.16
SKP2-209ENST00000620197 PHRF1Q9P1Y6 1649 aaKnown RBP16.04■□□□□ 0.16
SKP2-209ENST00000620197 PRIM1P49642 420 aaKnown RBP16.04■□□□□ 0.16
SKP2-209ENST00000620197 CCT4P50991 539 aaKnown RBP16.04■□□□□ 0.16
SKP2-209ENST00000620197 ANAPC15P60006 121 aa16.04■□□□□ 0.16
SKP2-209ENST00000620197 TMEM63CQ9P1W3 806 aa16.04■□□□□ 0.16
SKP2-209ENST00000620197 TCHHQ07283 1943 aa16.04■□□□□ 0.16
SKP2-209ENST00000620197 MAP3K19Q56UN5 1328 aa16.04■□□□□ 0.16
SKP2-209ENST00000620197 PLEKHG5O94827 1062 aa16.04■□□□□ 0.16
SKP2-209ENST00000620197 INTS4Q96HW7 963 aaKnown RBP16.04■□□□□ 0.16
SKP2-209ENST00000620197 AOX1Q06278 1338 aa16.03■□□□□ 0.16
SKP2-209ENST00000620197 IGSF1Q8N6C5 1336 aa16.03■□□□□ 0.16
SKP2-209ENST00000620197 SBNO1A3KN83 1393 aa16.03■□□□□ 0.16
SKP2-209ENST00000620197 CAVIN1Q6NZI2 390 aaKnown RBP16.03■□□□□ 0.16
SKP2-209ENST00000620197 NSFL1CQ9UNZ2 370 aaKnown RBP16.03■□□□□ 0.16
SKP2-209ENST00000620197 PLEKHG1Q9ULL1 1385 aa16.03■□□□□ 0.16
SKP2-209ENST00000620197 CASC1Q6TDU7 716 aa16.03■□□□□ 0.16
SKP2-209ENST00000620197 LRSAM1Q6UWE0 723 aa16.03■□□□□ 0.16
SKP2-209ENST00000620197 G2E3Q7L622 706 aa16.03■□□□□ 0.16
SKP2-209ENST00000620197 ESYT1Q9BSJ8 1104 aa16.03■□□□□ 0.16
SKP2-209ENST00000620197 SOS1Q07889 1333 aaPredicted RBP16.02■□□□□ 0.15
SKP2-209ENST00000620197 SLIT1O75093 1534 aa16.02■□□□□ 0.15
SKP2-209ENST00000620197 LMO7Q8WWI1 1683 aa16.02■□□□□ 0.15
SKP2-209ENST00000620197 MCM2P49736 904 aa16.02■□□□□ 0.15
SKP2-209ENST00000620197 TMX3Q96JJ7 454 aa16.02■□□□□ 0.15
SKP2-209ENST00000620197 ACEP12821 1306 aa16.02■□□□□ 0.15
SKP2-209ENST00000620197 SLC4A2P04920 1241 aa16.01■□□□□ 0.15
SKP2-209ENST00000620197 HSP90AB2PQ58FF8 381 aa16.01■□□□□ 0.15
SKP2-209ENST00000620197 ZMYND15Q9H091 742 aa16.01■□□□□ 0.15
SKP2-209ENST00000620197 GLIPR1L2Q4G1C9 344 aa16.01■□□□□ 0.15
SKP2-209ENST00000620197 STAG3Q9UJ98 1225 aa16.01■□□□□ 0.15
SKP2-209ENST00000620197 LTN1O94822 1766 aa16■□□□□ 0.15
SKP2-209ENST00000620197 HMMRO75330 724 aa16■□□□□ 0.15
SKP2-209ENST00000620197 MTHFSDQ2M296 383 aaKnown RBP16■□□□□ 0.15
SKP2-209ENST00000620197 PKNOX2Q96KN3 472 aa16■□□□□ 0.15
SKP2-209ENST00000620197 FLT4P35916 1363 aa16■□□□□ 0.15
SKP2-209ENST00000620197 ARHGAP23Q9P227 1491 aa16■□□□□ 0.15
SKP2-209ENST00000620197 HTATSF1O43719 755 aaKnown RBP16■□□□□ 0.15
SKP2-209ENST00000620197 PALD1Q9ULE6 856 aa16■□□□□ 0.15
SKP2-209ENST00000620197 CHMLP26374 656 aa15.99■□□□□ 0.15
SKP2-209ENST00000620197 MCM5P33992 734 aa15.99■□□□□ 0.15
SKP2-209ENST00000620197 RPAP1Q9BWH6 1393 aaPredicted RBP15.99■□□□□ 0.15
SKP2-209ENST00000620197 PRPF40AO75400 957 aaKnown RBP15.99■□□□□ 0.15
SKP2-209ENST00000620197 TTC21AQ8NDW8 1320 aa15.99■□□□□ 0.15
SKP2-209ENST00000620197 VSIG10Q8N0Z9 540 aa15.99■□□□□ 0.15
SKP2-209ENST00000620197 TMEM87AQ8NBN3 555 aa15.99■□□□□ 0.15
SKP2-209ENST00000620197 RBM27Q9P2N5 1060 aaKnown RBP15.99■□□□□ 0.15
SKP2-209ENST00000620197 ATP8B2P98198 1209 aa15.98■□□□□ 0.15
SKP2-209ENST00000620197 SIPA1L3O60292 1781 aaPredicted RBP15.98■□□□□ 0.15
SKP2-209ENST00000620197 GNAI2P04899 355 aa15.97■□□□□ 0.15
SKP2-209ENST00000620197 KIAA1211Q6ZU35 1233 aa15.97■□□□□ 0.15
SKP2-209ENST00000620197 CHAMP1Q96JM3 812 aa15.97■□□□□ 0.15
SKP2-209ENST00000620197 TNRQ92752 1358 aa15.97■□□□□ 0.15
SKP2-209ENST00000620197 PNMA6EA0A0J9YXQ4 647 aa15.97■□□□□ 0.15
SKP2-209ENST00000620197 FOXO3O43524 673 aa15.97■□□□□ 0.15
SKP2-209ENST00000620197 KLHL34Q8N239 644 aa15.97■□□□□ 0.15
SKP2-209ENST00000620197 MBD3O95983 291 aa15.96■□□□□ 0.15
SKP2-209ENST00000620197 MX1P20591 662 aa15.96■□□□□ 0.15
SKP2-209ENST00000620197 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.96■□□□□ 0.15
SKP2-209ENST00000620197 BABAM1Q9NWV8 329 aa15.96■□□□□ 0.15
SKP2-209ENST00000620197 ZKSCAN5Q9Y2L8 839 aa15.96■□□□□ 0.15
SKP2-209ENST00000620197 IL25Q9H293 177 aa15.96■□□□□ 0.15
SKP2-209ENST00000620197 F6X3S4 739 aa15.95■□□□□ 0.14
SKP2-209ENST00000620197 ADAMTS7Q9UKP4 1686 aa15.95■□□□□ 0.14
SKP2-209ENST00000620197 LRRCC1Q9C099 1032 aa15.95■□□□□ 0.14
SKP2-209ENST00000620197 SRCIN1Q9C0H9 1055 aa15.95■□□□□ 0.14
SKP2-209ENST00000620197 CAMTA1Q9Y6Y1 1673 aa15.95■□□□□ 0.14
SKP2-209ENST00000620197 POLA2Q14181 598 aa15.95■□□□□ 0.14
SKP2-209ENST00000620197 HSPA4P34932 840 aa15.94■□□□□ 0.14
SKP2-209ENST00000620197 USP42Q9H9J4 1324 aaKnown RBP15.94■□□□□ 0.14
SKP2-209ENST00000620197 NEK4P51957 841 aa15.93■□□□□ 0.14
SKP2-209ENST00000620197 UNC5CLQ8IV45 518 aa15.93■□□□□ 0.14
SKP2-209ENST00000620197 SSH3Q8TE77 659 aa15.93■□□□□ 0.14
SKP2-209ENST00000620197 PDCL3Q9H2J4 239 aa15.93■□□□□ 0.14
SKP2-209ENST00000620197 MIS18AQ9NYP9 233 aa15.93■□□□□ 0.14
SKP2-209ENST00000620197 FLIIQ13045 1269 aa15.93■□□□□ 0.14
SKP2-209ENST00000620197 TTC14Q96N46 770 aa15.93■□□□□ 0.14
SKP2-209ENST00000620197 EXOC6BQ9Y2D4 811 aa15.93■□□□□ 0.14
SKP2-209ENST00000620197 CEMIPQ8WUJ3 1361 aa15.92■□□□□ 0.14
SKP2-209ENST00000620197 SYCE3A1L190 88 aa15.92■□□□□ 0.14
SKP2-209ENST00000620197 GNAI3P08754 354 aa15.92■□□□□ 0.14
SKP2-209ENST00000620197 TSPYL4Q9UJ04 414 aa15.92■□□□□ 0.14
SKP2-209ENST00000620197 NFAT5O94916 1531 aa15.92■□□□□ 0.14
SKP2-209ENST00000620197 PI4K2BQ8TCG2 481 aa15.92■□□□□ 0.14
SKP2-209ENST00000620197 EYA1Q99502 592 aa15.92■□□□□ 0.14
SKP2-209ENST00000620197 USP44Q9H0E7 712 aa15.92■□□□□ 0.14
SKP2-209ENST00000620197 ANKARQ7Z5J8 1434 aa15.92■□□□□ 0.14
SKP2-209ENST00000620197 TSHZ3Q63HK5 1081 aa15.92■□□□□ 0.14
SKP2-209ENST00000620197 ANP32BQ92688 251 aaKnown RBP15.92■□□□□ 0.14
SKP2-209ENST00000620197 RGPD2P0DJD1 1756 aa15.91■□□□□ 0.14
SKP2-209ENST00000620197 HDGFP51858 240 aaKnown RBP15.91■□□□□ 0.14
SKP2-209ENST00000620197 LMTK3Q96Q04 1460 aa15.9■□□□□ 0.14
SKP2-209ENST00000620197 MSNP26038 577 aaKnown RBP15.9■□□□□ 0.14
SKP2-209ENST00000620197 FAM69CQ0P6D2 419 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms