RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 TATP17735 454 aaPredicted RBP12.09□□□□□ -0.47
CDH23-213ENST00000619887 TAF7LQ5H9L4 462 aa12.09□□□□□ -0.47
CDH23-213ENST00000619887 CEP85Q6P2H3 762 aa12.09□□□□□ -0.47
CDH23-213ENST00000619887 EXOC6BQ9Y2D4 811 aa12.09□□□□□ -0.47
CDH23-213ENST00000619887 KIF20BQ96Q89 1820 aa12.08□□□□□ -0.47
CDH23-213ENST00000619887 CD163L1Q9NR16 1453 aa12.08□□□□□ -0.48
CDH23-213ENST00000619887 RBM25P49756 843 aaKnown RBP12.08□□□□□ -0.48
CDH23-213ENST00000619887 KRT24Q2M2I5 525 aa12.08□□□□□ -0.48
CDH23-213ENST00000619887 USHBP1Q8N6Y0 703 aa12.08□□□□□ -0.48
CDH23-213ENST00000619887 SHPRHQ149N8 1683 aa12.08□□□□□ -0.48
CDH23-213ENST00000619887 SMARCA5O60264 1052 aaPredicted RBP12.08□□□□□ -0.48
CDH23-213ENST00000619887 MX1P20591 662 aa12.08□□□□□ -0.48
CDH23-213ENST00000619887 RIC3Q7Z5B4 369 aa12.07□□□□□ -0.48
CDH23-213ENST00000619887 FOXO3O43524 673 aa12.07□□□□□ -0.48
CDH23-213ENST00000619887 MRE11P49959 708 aa12.07□□□□□ -0.48
CDH23-213ENST00000619887 SPG7Q9UQ90 795 aa12.07□□□□□ -0.48
CDH23-213ENST00000619887 MYO5BQ9ULV0 1848 aa12.07□□□□□ -0.48
CDH23-213ENST00000619887 MSH6P52701 1360 aa12.07□□□□□ -0.48
CDH23-213ENST00000619887 SRGAP3O43295 1099 aa12.07□□□□□ -0.48
CDH23-213ENST00000619887 IP6K1Q92551 441 aa12.07□□□□□ -0.48
CDH23-213ENST00000619887 SYTL4Q96C24 671 aaPredicted RBP12.07□□□□□ -0.48
CDH23-213ENST00000619887 GOLGA6L4A6NEF3 574 aa12.06□□□□□ -0.48
CDH23-213ENST00000619887 CSPP1Q1MSJ5 1256 aa12.06□□□□□ -0.48
CDH23-213ENST00000619887 PLEKHM2Q8IWE5 1019 aa12.06□□□□□ -0.48
CDH23-213ENST00000619887 KIF1BPQ96EK5 621 aa12.06□□□□□ -0.48
CDH23-213ENST00000619887 ANKARQ7Z5J8 1434 aa12.06□□□□□ -0.48
CDH23-213ENST00000619887 NEK4P51957 841 aa12.06□□□□□ -0.48
CDH23-213ENST00000619887 DNAAF4Q8WXU2 420 aa12.06□□□□□ -0.48
CDH23-213ENST00000619887 LRRFIP2Q9Y608 721 aaKnown RBP12.06□□□□□ -0.48
CDH23-213ENST00000619887 ZKSCAN1P17029 563 aaPredicted RBP12.06□□□□□ -0.48
CDH23-213ENST00000619887 AEBP2Q6ZN18 517 aaPredicted RBP12.05□□□□□ -0.48
CDH23-213ENST00000619887 DBF4Q9UBU7 674 aaPredicted RBP12.05□□□□□ -0.48
CDH23-213ENST00000619887 ATP6V1DQ9Y5K8 247 aa12.05□□□□□ -0.48
CDH23-213ENST00000619887 IGSF1Q8N6C5 1336 aa12.05□□□□□ -0.48
CDH23-213ENST00000619887 GTF2E1P29083 439 aaPredicted RBP12.05□□□□□ -0.48
CDH23-213ENST00000619887 IL27Q8NEV9 243 aa12.05□□□□□ -0.48
CDH23-213ENST00000619887 AKAP4Q5JQC9 854 aa12.04□□□□□ -0.48
CDH23-213ENST00000619887 HIP1O00291 1037 aa12.04□□□□□ -0.48
CDH23-213ENST00000619887 PHF14O94880 888 aa12.04□□□□□ -0.48
CDH23-213ENST00000619887 ATP8B2P98198 1209 aa12.04□□□□□ -0.48
CDH23-213ENST00000619887 SDSP20132 328 aa12.04□□□□□ -0.48
CDH23-213ENST00000619887 AIMP1Q12904 312 aaKnown RBP12.04□□□□□ -0.48
CDH23-213ENST00000619887 ANKRD26Q9UPS8 1709 aa12.04□□□□□ -0.48
CDH23-213ENST00000619887 HOXB7P09629 217 aa12.03□□□□□ -0.48
CDH23-213ENST00000619887 XPCQ01831 940 aaPredicted RBP12.03□□□□□ -0.48
CDH23-213ENST00000619887 KRT28Q7Z3Y7 464 aa12.03□□□□□ -0.48
CDH23-213ENST00000619887 RTL1A6NKG5 1358 aa12.03□□□□□ -0.48
CDH23-213ENST00000619887 ADAMTS13Q76LX8 1427 aa12.03□□□□□ -0.48
CDH23-213ENST00000619887 RNF20Q5VTR2 975 aa12.03□□□□□ -0.48
CDH23-213ENST00000619887 ITSN1Q15811 1721 aa12.03□□□□□ -0.48
CDH23-213ENST00000619887 PDE1AP54750 535 aa12.03□□□□□ -0.48
CDH23-213ENST00000619887 MCTP1Q6DN14 999 aa12.03□□□□□ -0.48
CDH23-213ENST00000619887 HYPKQ9NX55 129 aa12.03□□□□□ -0.48
CDH23-213ENST00000619887 USP31Q70CQ4 1352 aa12.02□□□□□ -0.48
CDH23-213ENST00000619887 MPRIPQ6WCQ1 1025 aa12.02□□□□□ -0.48
CDH23-213ENST00000619887 ANKRD24Q8TF21 1146 aa12.02□□□□□ -0.48
CDH23-213ENST00000619887 IL1RAPL2Q9NP60 686 aa12.02□□□□□ -0.48
CDH23-213ENST00000619887 CPS1P31327 1500 aa12.02□□□□□ -0.49
CDH23-213ENST00000619887 DNTTIP2Q5QJE6 756 aaKnown RBP12.02□□□□□ -0.49
CDH23-213ENST00000619887 RBM33Q96EV2 1170 aaKnown RBP12.01□□□□□ -0.49
CDH23-213ENST00000619887 GLRX3O76003 335 aaKnown RBP12.01□□□□□ -0.49
CDH23-213ENST00000619887 MSNP26038 577 aaKnown RBP12.01□□□□□ -0.49
CDH23-213ENST00000619887 FOXD4L5Q5VV16 416 aaPredicted RBP12.01□□□□□ -0.49
CDH23-213ENST00000619887 G2E3Q7L622 706 aa12.01□□□□□ -0.49
CDH23-213ENST00000619887 FOXD4L4Q8WXT5 416 aaPredicted RBP12.01□□□□□ -0.49
CDH23-213ENST00000619887 BRPF3Q9ULD4 1205 aa12.01□□□□□ -0.49
CDH23-213ENST00000619887 OVOS2A0A0J9YW53 1432 aa12.01□□□□□ -0.49
CDH23-213ENST00000619887 OVOS2Q6IE36 1432 aa12.01□□□□□ -0.49
CDH23-213ENST00000619887 USP19O94966 1318 aa12.01□□□□□ -0.49
CDH23-213ENST00000619887 ZC3H6P61129 1189 aaKnown RBP12□□□□□ -0.49
CDH23-213ENST00000619887 MBD3O95983 291 aa12□□□□□ -0.49
CDH23-213ENST00000619887 C16orf71Q8IYS4 520 aaPredicted RBP12□□□□□ -0.49
CDH23-213ENST00000619887 TNPO1Q92973 898 aaKnown RBP12□□□□□ -0.49
CDH23-213ENST00000619887 MAP2P11137 1827 aaKnown RBP12□□□□□ -0.49
CDH23-213ENST00000619887 LARP1Q6PKG0 1096 aaKnown RBP12□□□□□ -0.49
CDH23-213ENST00000619887 ZSCAN21Q9Y5A6 473 aaPredicted RBP12□□□□□ -0.49
CDH23-213ENST00000619887 PPP1R42Q7Z4L9 355 aa12□□□□□ -0.49
CDH23-213ENST00000619887 PI4KAP2A4QPH2 592 aa11.99□□□□□ -0.49
CDH23-213ENST00000619887 ALDH1L1O75891 902 aa11.99□□□□□ -0.49
CDH23-213ENST00000619887 GCP02774 474 aa11.99□□□□□ -0.49
CDH23-213ENST00000619887 PI4KAP1Q8N8J0 262 aa11.99□□□□□ -0.49
CDH23-213ENST00000619887 LRRFIP1Q32MZ4 808 aaKnown RBP11.99□□□□□ -0.49
CDH23-213ENST00000619887 SMC3Q9UQE7 1217 aa11.99□□□□□ -0.49
CDH23-213ENST00000619887 NUTM1Q86Y26 1132 aa11.99□□□□□ -0.49
CDH23-213ENST00000619887 CHMP4CQ96CF2 233 aa11.98□□□□□ -0.49
CDH23-213ENST00000619887 NAP1L5Q96NT1 182 aaPredicted RBP11.98□□□□□ -0.49
CDH23-213ENST00000619887 PSMA5P28066 241 aa11.98□□□□□ -0.49
CDH23-213ENST00000619887 CABP4P57796 275 aa11.98□□□□□ -0.49
CDH23-213ENST00000619887 CHPF2Q9P2E5 772 aa11.98□□□□□ -0.49
CDH23-213ENST00000619887 ANAPC15P60006 121 aa11.98□□□□□ -0.49
CDH23-213ENST00000619887 KIF3AQ9Y496 699 aa11.98□□□□□ -0.49
CDH23-213ENST00000619887 FOXD4L6Q3SYB3 417 aaPredicted RBP11.97□□□□□ -0.49
CDH23-213ENST00000619887 FOXD4L3Q6VB84 417 aaPredicted RBP11.97□□□□□ -0.49
CDH23-213ENST00000619887 RHPN1Q8TCX5 695 aa11.97□□□□□ -0.49
CDH23-213ENST00000619887 FSD1Q9BTV5 496 aa11.97□□□□□ -0.49
CDH23-213ENST00000619887 USP26Q9BXU7 913 aa11.97□□□□□ -0.49
CDH23-213ENST00000619887 C19orf44Q9H6X5 657 aa11.97□□□□□ -0.49
CDH23-213ENST00000619887 AOX1Q06278 1338 aa11.97□□□□□ -0.49
CDH23-213ENST00000619887 AACSQ86V21 672 aa11.97□□□□□ -0.49
CDH23-213ENST00000619887 ESYT1Q9BSJ8 1104 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms