RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 VIRMAQ69YN4 1812 aaKnown RBP24.1■■□□□ 1.45
LAPTM4B-204ENST00000619747 SMARCA5O60264 1052 aaPredicted RBP24.09■■□□□ 1.45
LAPTM4B-204ENST00000619747 CEP85Q6P2H3 762 aa24.09■■□□□ 1.45
LAPTM4B-204ENST00000619747 C1orf167Q5SNV9 1468 aa24.09■■□□□ 1.45
LAPTM4B-204ENST00000619747 PHAXQ9H814 394 aaKnown RBP24.09■■□□□ 1.45
LAPTM4B-204ENST00000619747 HDGFL1Q5TGJ6 251 aa24.08■■□□□ 1.45
LAPTM4B-204ENST00000619747 SPRYD3Q8NCJ5 442 aa24.08■■□□□ 1.45
LAPTM4B-204ENST00000619747 ANXA1P04083 346 aa24.08■■□□□ 1.45
LAPTM4B-204ENST00000619747 TEFQ10587 303 aa24.08■■□□□ 1.45
LAPTM4B-204ENST00000619747 RGPD2P0DJD1 1756 aa24.08■■□□□ 1.45
LAPTM4B-204ENST00000619747 ANKRD44Q8N8A2 993 aa24.08■■□□□ 1.44
LAPTM4B-204ENST00000619747 C22orf23Q9BZE7 217 aa24.08■■□□□ 1.44
LAPTM4B-204ENST00000619747 SLKQ9H2G2 1235 aaPredicted RBP24.08■■□□□ 1.44
LAPTM4B-204ENST00000619747 OTUD7AQ8TE49 926 aaPredicted RBP24.07■■□□□ 1.44
LAPTM4B-204ENST00000619747 DCTPP1Q9H773 170 aa24.07■■□□□ 1.44
LAPTM4B-204ENST00000619747 PLEKHO1Q53GL0 409 aaPredicted RBP24.05■■□□□ 1.44
LAPTM4B-204ENST00000619747 ARXQ96QS3 562 aa24.05■■□□□ 1.44
LAPTM4B-204ENST00000619747 CHRNA2Q15822 529 aa24.05■■□□□ 1.44
LAPTM4B-204ENST00000619747 BTBD11A6QL63 1104 aa24.04■■□□□ 1.44
LAPTM4B-204ENST00000619747 C1orf141Q5JVX7 400 aa24.04■■□□□ 1.44
LAPTM4B-204ENST00000619747 NLRP2Q9NX02 1062 aa24.04■■□□□ 1.44
LAPTM4B-204ENST00000619747 RPAP2Q8IXW5 612 aaPredicted RBP24.03■■□□□ 1.44
LAPTM4B-204ENST00000619747 ATP10DQ9P241 1426 aa24.03■■□□□ 1.44
LAPTM4B-204ENST00000619747 CCT4P50991 539 aaKnown RBP24.03■■□□□ 1.44
LAPTM4B-204ENST00000619747 BMP2KLQ5H9B9 411 aa24.02■■□□□ 1.44
LAPTM4B-204ENST00000619747 RBM10P98175 930 aaKnown RBP24.02■■□□□ 1.44
LAPTM4B-204ENST00000619747 AKAP4Q5JQC9 854 aa24.02■■□□□ 1.44
LAPTM4B-204ENST00000619747 EIF4A1P60842 406 aaKnown RBP24.01■■□□□ 1.43
LAPTM4B-204ENST00000619747 BECN1Q14457 450 aa24.01■■□□□ 1.43
LAPTM4B-204ENST00000619747 PLEKHM2Q8IWE5 1019 aa24.01■■□□□ 1.43
LAPTM4B-204ENST00000619747 USP54Q70EL1 1684 aa24■■□□□ 1.43
LAPTM4B-204ENST00000619747 TBC1D2Q9BYX2 928 aa24■■□□□ 1.43
LAPTM4B-204ENST00000619747 CHPF2Q9P2E5 772 aa24■■□□□ 1.43
LAPTM4B-204ENST00000619747 EXOC6BQ9Y2D4 811 aa24■■□□□ 1.43
LAPTM4B-204ENST00000619747 CEMIPQ8WUJ3 1361 aa24■■□□□ 1.43
LAPTM4B-204ENST00000619747 PRAMEF22A3QJZ6 481 aa23.99■■□□□ 1.43
LAPTM4B-204ENST00000619747 CSB-PGBD3P0DP91 1061 aa23.99■■□□□ 1.43
LAPTM4B-204ENST00000619747 GSPT1P15170 499 aaKnown RBP23.98■■□□□ 1.43
LAPTM4B-204ENST00000619747 PXDNQ92626 1479 aa23.98■■□□□ 1.43
LAPTM4B-204ENST00000619747 RNMTO43148 476 aaKnown RBP23.98■■□□□ 1.43
LAPTM4B-204ENST00000619747 TBC1D9Q6ZT07 1266 aa23.98■■□□□ 1.43
LAPTM4B-204ENST00000619747 GNAI2P04899 355 aa23.97■■□□□ 1.43
LAPTM4B-204ENST00000619747 ERBB3P21860 1342 aa23.97■■□□□ 1.43
LAPTM4B-204ENST00000619747 AMOTQ4VCS5 1084 aa23.97■■□□□ 1.43
LAPTM4B-204ENST00000619747 PNMA6EA0A0J9YXQ4 647 aa23.96■■□□□ 1.43
LAPTM4B-204ENST00000619747 MST1RQ04912 1400 aa23.96■■□□□ 1.43
LAPTM4B-204ENST00000619747 LRRFIP2Q9Y608 721 aaKnown RBP23.96■■□□□ 1.43
LAPTM4B-204ENST00000619747 CADPS2Q86UW7 1296 aa23.95■■□□□ 1.42
LAPTM4B-204ENST00000619747 CLCN1P35523 988 aa23.95■■□□□ 1.42
LAPTM4B-204ENST00000619747 TSHZ3Q63HK5 1081 aa23.95■■□□□ 1.42
LAPTM4B-204ENST00000619747 RAPGEF4Q8WZA2 1011 aa23.94■■□□□ 1.42
LAPTM4B-204ENST00000619747 BABAM1Q9NWV8 329 aa23.94■■□□□ 1.42
LAPTM4B-204ENST00000619747 LRRC37A3O60309 1634 aa23.94■■□□□ 1.42
LAPTM4B-204ENST00000619747 PI4KAP2A4QPH2 592 aa23.93■■□□□ 1.42
LAPTM4B-204ENST00000619747 HMMRO75330 724 aa23.93■■□□□ 1.42
LAPTM4B-204ENST00000619747 SLC39A6Q13433 755 aa23.93■■□□□ 1.42
LAPTM4B-204ENST00000619747 PI4KAP1Q8N8J0 262 aa23.93■■□□□ 1.42
LAPTM4B-204ENST00000619747 USP44Q9H0E7 712 aa23.93■■□□□ 1.42
LAPTM4B-204ENST00000619747 L1TD1Q5T7N2 865 aaKnown RBP23.93■■□□□ 1.42
LAPTM4B-204ENST00000619747 STRCP1A6NGW2 1772 aa23.92■■□□□ 1.42
LAPTM4B-204ENST00000619747 RGPD5Q99666 1765 aa23.92■■□□□ 1.42
LAPTM4B-204ENST00000619747 SLIT3O75094 1523 aa23.91■■□□□ 1.42
LAPTM4B-204ENST00000619747 PROSER3Q2NL68 480 aa23.91■■□□□ 1.42
LAPTM4B-204ENST00000619747 GNAI3P08754 354 aa23.91■■□□□ 1.42
LAPTM4B-204ENST00000619747 NPHP3Q7Z494 1330 aa23.91■■□□□ 1.42
LAPTM4B-204ENST00000619747 UBTFL1P0CB47 393 aaPredicted RBP23.9■■□□□ 1.42
LAPTM4B-204ENST00000619747 TTC22Q5TAA0 569 aa23.9■■□□□ 1.42
LAPTM4B-204ENST00000619747 TRPM3Q9HCF6 1732 aaPredicted RBP23.89■■□□□ 1.42
LAPTM4B-204ENST00000619747 NBPF7P0C2Y1 421 aaPredicted RBP23.88■■□□□ 1.41
LAPTM4B-204ENST00000619747 MED1Q15648 1581 aaPredicted RBP23.88■■□□□ 1.41
LAPTM4B-204ENST00000619747 SRCIN1Q9C0H9 1055 aa23.88■■□□□ 1.41
LAPTM4B-204ENST00000619747 CDC45O75419 566 aa23.87■■□□□ 1.41
LAPTM4B-204ENST00000619747 AIMP1Q12904 312 aaKnown RBP23.87■■□□□ 1.41
LAPTM4B-204ENST00000619747 NFATC2IPQ8NCF5 419 aa23.87■■□□□ 1.41
LAPTM4B-204ENST00000619747 RBM42Q9BTD8 480 aaKnown RBP23.87■■□□□ 1.41
LAPTM4B-204ENST00000619747 GIGYF1O75420 1035 aaPredicted RBP23.86■■□□□ 1.41
LAPTM4B-204ENST00000619747 SDSP20132 328 aa23.86■■□□□ 1.41
LAPTM4B-204ENST00000619747 XRCC6P12956 609 aaKnown RBP eCLIP23.86■■□□□ 1.41
LAPTM4B-204ENST00000619747 ZNF335Q9H4Z2 1342 aaPredicted RBP23.85■■□□□ 1.41
LAPTM4B-204ENST00000619747 FAM208AQ9UK61 1670 aaKnown RBP23.85■■□□□ 1.41
LAPTM4B-204ENST00000619747 TATP17735 454 aaPredicted RBP23.85■■□□□ 1.41
LAPTM4B-204ENST00000619747 ATP8B2P98198 1209 aa23.85■■□□□ 1.41
LAPTM4B-204ENST00000619747 DNAAF4Q8WXU2 420 aa23.85■■□□□ 1.41
LAPTM4B-204ENST00000619747 PANK2Q9BZ23 570 aa23.85■■□□□ 1.41
LAPTM4B-204ENST00000619747 IL1RAPL2Q9NP60 686 aa23.85■■□□□ 1.41
LAPTM4B-204ENST00000619747 BRINP3Q76B58 766 aa23.85■■□□□ 1.41
LAPTM4B-204ENST00000619747 SOS1Q07889 1333 aaPredicted RBP23.84■■□□□ 1.41
LAPTM4B-204ENST00000619747 PIP4K2AP48426 406 aaPredicted RBP23.84■■□□□ 1.41
LAPTM4B-204ENST00000619747 RBM25P49756 843 aaKnown RBP23.83■■□□□ 1.41
LAPTM4B-204ENST00000619747 DBF4Q9UBU7 674 aaPredicted RBP23.83■■□□□ 1.4
LAPTM4B-204ENST00000619747 PPP1R42Q7Z4L9 355 aa23.82■■□□□ 1.4
LAPTM4B-204ENST00000619747 LRRCC1Q9C099 1032 aa23.82■■□□□ 1.4
LAPTM4B-204ENST00000619747 SPATA31A3Q5VYP0 1347 aa23.82■■□□□ 1.4
LAPTM4B-204ENST00000619747 MAP3K2Q9Y2U5 619 aa23.82■■□□□ 1.4
LAPTM4B-204ENST00000619747 KDM4FA0A1W2PPD8 638 aa23.81■■□□□ 1.4
LAPTM4B-204ENST00000619747 PDE1AP54750 535 aa23.81■■□□□ 1.4
LAPTM4B-204ENST00000619747 BEND3Q5T5X7 828 aa23.81■■□□□ 1.4
LAPTM4B-204ENST00000619747 PHRF1Q9P1Y6 1649 aaKnown RBP23.81■■□□□ 1.4
LAPTM4B-204ENST00000619747 KIF1AQ12756 1690 aa23.81■■□□□ 1.4
LAPTM4B-204ENST00000619747 MYL6BP14649 208 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms