RNA–Protein interactions for RNA: ENST00000619554.1

NBPF3-213, Transcript of NBPF member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NBPF3, Length 1,831 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-213ENST00000619554 CCDC136Q96JN2 1154 aa13.64□□□□□ -0.23
NBPF3-213ENST00000619554 KCNQ2O43526 872 aa13.63□□□□□ -0.23
NBPF3-213ENST00000619554 TRIM35Q9UPQ4 493 aa13.63□□□□□ -0.23
NBPF3-213ENST00000619554 WWC1Q8IX03 1113 aa13.62□□□□□ -0.23
NBPF3-213ENST00000619554 THUMPD2Q9BTF0 503 aaKnown RBP13.62□□□□□ -0.23
NBPF3-213ENST00000619554 PKD1L3Q7Z443 1732 aa13.62□□□□□ -0.23
NBPF3-213ENST00000619554 BTBD11A6QL63 1104 aa13.62□□□□□ -0.23
NBPF3-213ENST00000619554 TAF7Q15545 349 aaPredicted RBP13.62□□□□□ -0.23
NBPF3-213ENST00000619554 PIGBQ92521 554 aa13.62□□□□□ -0.23
NBPF3-213ENST00000619554 LAS1LQ9Y4W2 734 aaKnown RBP13.62□□□□□ -0.23
NBPF3-213ENST00000619554 EP400Q96L91 3159 aa13.62□□□□□ -0.23
NBPF3-213ENST00000619554 KDM6AO15550 1401 aaPredicted RBP13.61□□□□□ -0.23
NBPF3-213ENST00000619554 CEMIPQ8WUJ3 1361 aa13.61□□□□□ -0.23
NBPF3-213ENST00000619554 ILDR2Q71H61 639 aa13.61□□□□□ -0.23
NBPF3-213ENST00000619554 CCDC125Q86Z20 511 aa13.61□□□□□ -0.23
NBPF3-213ENST00000619554 WNK3Q9BYP7 1800 aa13.61□□□□□ -0.23
NBPF3-213ENST00000619554 APBA3O96018 575 aa13.6□□□□□ -0.23
NBPF3-213ENST00000619554 TTC5Q8N0Z6 440 aa13.6□□□□□ -0.23
NBPF3-213ENST00000619554 SMARCC1Q92922 1105 aaPredicted RBP13.6□□□□□ -0.23
NBPF3-213ENST00000619554 WDR63Q8IWG1 891 aa13.6□□□□□ -0.23
NBPF3-213ENST00000619554 IPO9Q96P70 1041 aaKnown RBP13.6□□□□□ -0.23
NBPF3-213ENST00000619554 ANP32AP39687 249 aaKnown RBP13.59□□□□□ -0.23
NBPF3-213ENST00000619554 GNAI1P63096 354 aa13.58□□□□□ -0.24
NBPF3-213ENST00000619554 BABAM1Q9NWV8 329 aa13.58□□□□□ -0.24
NBPF3-213ENST00000619554 TSPYL4Q9UJ04 414 aa13.58□□□□□ -0.24
NBPF3-213ENST00000619554 CFAP44Q96MT7 982 aa13.57□□□□□ -0.24
NBPF3-213ENST00000619554 IFT57Q9NWB7 429 aa13.57□□□□□ -0.24
NBPF3-213ENST00000619554 IL16Q14005 1332 aa13.57□□□□□ -0.24
NBPF3-213ENST00000619554 BAG6P46379 1132 aa13.57□□□□□ -0.24
NBPF3-213ENST00000619554 GOLGA2Q08379 1002 aa13.57□□□□□ -0.24
NBPF3-213ENST00000619554 PTF1AQ7RTS3 328 aa13.57□□□□□ -0.24
NBPF3-213ENST00000619554 ATG3Q9NT62 314 aa13.57□□□□□ -0.24
NBPF3-213ENST00000619554 MIS18AQ9NYP9 233 aa13.57□□□□□ -0.24
NBPF3-213ENST00000619554 ASAP1Q9ULH1 1129 aa13.57□□□□□ -0.24
NBPF3-213ENST00000619554 SLC39A6Q13433 755 aa13.56□□□□□ -0.24
NBPF3-213ENST00000619554 ZNF790Q6PG37 636 aa13.56□□□□□ -0.24
NBPF3-213ENST00000619554 RBM42Q9BTD8 480 aaKnown RBP13.56□□□□□ -0.24
NBPF3-213ENST00000619554 MYH16Q9H6N6 1097 aa13.56□□□□□ -0.24
NBPF3-213ENST00000619554 CHL1O00533 1208 aa13.55□□□□□ -0.24
NBPF3-213ENST00000619554 TCERG1O14776 1098 aaKnown RBP13.55□□□□□ -0.24
NBPF3-213ENST00000619554 PTCD1O75127 700 aaKnown RBP13.55□□□□□ -0.24
NBPF3-213ENST00000619554 HMGB2P26583 209 aaKnown RBP13.55□□□□□ -0.24
NBPF3-213ENST00000619554 BRWD3Q6RI45 1802 aa13.55□□□□□ -0.24
NBPF3-213ENST00000619554 PLSCR1O15162 318 aa13.55□□□□□ -0.24
NBPF3-213ENST00000619554 FMNL2Q96PY5 1086 aa13.55□□□□□ -0.24
NBPF3-213ENST00000619554 E9PSI1 815 aa13.54□□□□□ -0.24
NBPF3-213ENST00000619554 MS4A1P11836 297 aa13.54□□□□□ -0.24
NBPF3-213ENST00000619554 RRP1P56182 461 aaKnown RBP13.54□□□□□ -0.24
NBPF3-213ENST00000619554 PALLDQ8WX93 1383 aa13.54□□□□□ -0.24
NBPF3-213ENST00000619554 UPF1Q92900 1129 aaKnown RBP eCLIP13.54□□□□□ -0.24
NBPF3-213ENST00000619554 SHANK3Q9BYB0 1731 aa13.54□□□□□ -0.24
NBPF3-213ENST00000619554 DEKP35659 375 aaKnown RBP13.53□□□□□ -0.24
NBPF3-213ENST00000619554 MRC1P22897 1456 aa13.53□□□□□ -0.24
NBPF3-213ENST00000619554 KAT6BQ8WYB5 2073 aa13.53□□□□□ -0.24
NBPF3-213ENST00000619554 ZNF521Q96K83 1311 aa13.53□□□□□ -0.24
NBPF3-213ENST00000619554 LOC102724428A0A0B4J2F2 783 aa13.53□□□□□ -0.24
NBPF3-213ENST00000619554 ZNF853P0CG23 659 aa13.53□□□□□ -0.24
NBPF3-213ENST00000619554 SIK1P57059 783 aa13.53□□□□□ -0.24
NBPF3-213ENST00000619554 SLC27A3Q5K4L6 730 aa13.53□□□□□ -0.24
NBPF3-213ENST00000619554 MBIPQ9NS73 344 aa13.53□□□□□ -0.24
NBPF3-213ENST00000619554 ZBTB47Q9UFB7 747 aaPredicted RBP13.53□□□□□ -0.24
NBPF3-213ENST00000619554 CCNL1Q9UK58 526 aaPredicted RBP13.53□□□□□ -0.24
NBPF3-213ENST00000619554 ATP6V1AP38606 617 aa13.51□□□□□ -0.25
NBPF3-213ENST00000619554 EN1Q05925 392 aaPredicted RBP13.51□□□□□ -0.25
NBPF3-213ENST00000619554 ZNF496Q96IT1 587 aaPredicted RBP13.51□□□□□ -0.25
NBPF3-213ENST00000619554 TEX13AQ9BXU3 409 aaPredicted RBP13.51□□□□□ -0.25
NBPF3-213ENST00000619554 RCAN3Q9UKA8 241 aa13.51□□□□□ -0.25
NBPF3-213ENST00000619554 KCNQ3O43525 872 aa13.5□□□□□ -0.25
NBPF3-213ENST00000619554 SNRPA1P09661 255 aaKnown RBP13.5□□□□□ -0.25
NBPF3-213ENST00000619554 EIF4A1P60842 406 aaKnown RBP13.5□□□□□ -0.25
NBPF3-213ENST00000619554 TXNRD1Q16881 649 aa13.5□□□□□ -0.25
NBPF3-213ENST00000619554 VSIG10Q8N0Z9 540 aa13.5□□□□□ -0.25
NBPF3-213ENST00000619554 TSR2Q969E8 191 aaKnown RBP13.5□□□□□ -0.25
NBPF3-213ENST00000619554 DEFB132Q7Z7B7 95 aa13.5□□□□□ -0.25
NBPF3-213ENST00000619554 CHMP4AQ9BY43 222 aa13.5□□□□□ -0.25
NBPF3-213ENST00000619554 STARD3NLO95772 234 aa13.49□□□□□ -0.25
NBPF3-213ENST00000619554 SLFN5Q08AF3 891 aa13.49□□□□□ -0.25
NBPF3-213ENST00000619554 CAMKK2Q96RR4 588 aa13.49□□□□□ -0.25
NBPF3-213ENST00000619554 DOT1LQ8TEK3 1739 aa13.49□□□□□ -0.25
NBPF3-213ENST00000619554 EZH2Q15910 746 aaKnown RBP13.48□□□□□ -0.25
NBPF3-213ENST00000619554 CDCA7LQ96GN5 454 aa13.48□□□□□ -0.25
NBPF3-213ENST00000619554 SPINK5Q9NQ38 1064 aaPredicted RBP13.48□□□□□ -0.25
NBPF3-213ENST00000619554 NHSQ6T4R5 1651 aa13.48□□□□□ -0.25
NBPF3-213ENST00000619554 ADAMTS7Q9UKP4 1686 aa13.48□□□□□ -0.25
NBPF3-213ENST00000619554 GIGYF1O75420 1035 aaPredicted RBP13.47□□□□□ -0.25
NBPF3-213ENST00000619554 SCN11AQ9UI33 1791 aa13.47□□□□□ -0.25
NBPF3-213ENST00000619554 HEG1Q9ULI3 1381 aa13.47□□□□□ -0.25
NBPF3-213ENST00000619554 TOGARAM1Q9Y4F4 1720 aa13.47□□□□□ -0.25
NBPF3-213ENST00000619554 ELL2O00472 640 aaPredicted RBP13.46□□□□□ -0.25
NBPF3-213ENST00000619554 KCNQ4P56696 695 aa13.46□□□□□ -0.25
NBPF3-213ENST00000619554 HOXB7P09629 217 aa13.46□□□□□ -0.26
NBPF3-213ENST00000619554 DUSP27Q5VZP5 1158 aa13.46□□□□□ -0.26
NBPF3-213ENST00000619554 NPM2Q86SE8 214 aaKnown RBP13.46□□□□□ -0.26
NBPF3-213ENST00000619554 DNAJC10Q8IXB1 793 aa13.46□□□□□ -0.26
NBPF3-213ENST00000619554 PROM2Q8N271 834 aa13.46□□□□□ -0.26
NBPF3-213ENST00000619554 SOS1Q07889 1333 aaPredicted RBP13.45□□□□□ -0.26
NBPF3-213ENST00000619554 EIF2S2P20042 333 aaKnown RBP13.45□□□□□ -0.26
NBPF3-213ENST00000619554 EXOSC9Q06265 439 aaKnown RBP13.45□□□□□ -0.26
NBPF3-213ENST00000619554 TWISTNBQ3B726 338 aaPredicted RBP13.45□□□□□ -0.26
NBPF3-213ENST00000619554 NBPF14Q5TI25 921 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms